RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 ITIH2P19823 946 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 COMTP21964 271 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 IVDP26440 423 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 SOX5P35711 763 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 PGM1P36871 562 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 GRM4Q14833 912 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 TMEM259Q4ZIN3 620 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 RNF207Q6ZRF8 634 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 MAP7D3Q8IWC1 876 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 SCUBE1Q8IWY4 988 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 SYT11Q9BT88 431 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 IL17RBQ9NRM6 502 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 PTTG2Q9NZH5 202 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 SMIM31A0A1B0GVY4 71 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 ANKRD62A6NC57 917 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 AKAP3O75969 853 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 VARSP26640 1264 aaKnown RBP18.15■□□□□ 0.5
PTPA-207ENST00000393370 MAPK6Q16659 721 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 FYB2Q5VWT5 728 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 KIF6Q6ZMV9 814 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 GJA10Q969M2 543 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 CCDC97Q96F63 343 aaPredicted RBP18.15■□□□□ 0.5
PTPA-207ENST00000393370 ZHX3Q9H4I2 956 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 TRABDQ9H4I3 376 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 NDE1Q9NXR1 346 aa18.15■□□□□ 0.5
PTPA-207ENST00000393370 PRPF4O43172 522 aaKnown RBP eCLIP18.14■□□□□ 0.52e-7■■■□□ 15.4
PTPA-207ENST00000393370 PGM3O95394 542 aa18.14■□□□□ 0.5
PTPA-207ENST00000393370 ZNF24P17028 368 aa18.14■□□□□ 0.5
PTPA-207ENST00000393370 CA4P22748 312 aa18.14■□□□□ 0.5
PTPA-207ENST00000393370 RGS2P41220 211 aa18.14■□□□□ 0.5
PTPA-207ENST00000393370 VPS41P49754 854 aa18.14■□□□□ 0.5
PTPA-207ENST00000393370 RASA3Q14644 834 aa18.14■□□□□ 0.5
PTPA-207ENST00000393370 MESDQ14696 234 aa18.14■□□□□ 0.5
PTPA-207ENST00000393370 RAPH1Q70E73 1250 aa18.14■□□□□ 0.5
PTPA-207ENST00000393370 SMYD1Q8NB12 490 aa18.14■□□□□ 0.5
PTPA-207ENST00000393370 DDX17Q92841 729 aaKnown RBP18.14■□□□□ 0.5
PTPA-207ENST00000393370 SNF8Q96H20 258 aa18.14■□□□□ 0.5
PTPA-207ENST00000393370 POLR3CQ9BUI4 534 aaPredicted RBP18.14■□□□□ 0.5
PTPA-207ENST00000393370 ADAM33Q9BZ11 813 aa18.14■□□□□ 0.5
PTPA-207ENST00000393370 WDR37Q9Y2I8 494 aa18.14■□□□□ 0.5
PTPA-207ENST00000393370 VILLO15195 856 aa18.14■□□□□ 0.49
PTPA-207ENST00000393370 CDK4P11802 303 aa18.14■□□□□ 0.49
PTPA-207ENST00000393370 BTG3Q14201 252 aaPredicted RBP18.14■□□□□ 0.49
PTPA-207ENST00000393370 STAT4Q14765 748 aa18.14■□□□□ 0.49
PTPA-207ENST00000393370 MEX3CQ5U5Q3 659 aaKnown RBP18.14■□□□□ 0.49
PTPA-207ENST00000393370 CCDC174Q6PII3 467 aa18.14■□□□□ 0.49
PTPA-207ENST00000393370 CCDC65Q8IXS2 484 aa18.14■□□□□ 0.49
PTPA-207ENST00000393370 ARHGEF38Q9NXL2 777 aa18.14■□□□□ 0.49
PTPA-207ENST00000393370 TRMT112Q9UI30 125 aaKnown RBP18.14■□□□□ 0.49
PTPA-207ENST00000393370 PPM1HQ9ULR3 514 aa18.14■□□□□ 0.49
PTPA-207ENST00000393370 BARX2Q9UMQ3 279 aaPredicted RBP18.14■□□□□ 0.49
PTPA-207ENST00000393370 GAS8O95995 478 aa18.14■□□□□ 0.49
PTPA-207ENST00000393370 ESRRAP11474 423 aaPredicted RBP18.14■□□□□ 0.49
PTPA-207ENST00000393370 GCAP28676 217 aa18.14■□□□□ 0.49
PTPA-207ENST00000393370 CPA2P48052 419 aa18.14■□□□□ 0.49
PTPA-207ENST00000393370 DRAP1Q14919 205 aaPredicted RBP18.14■□□□□ 0.49
PTPA-207ENST00000393370 PKN2Q16513 984 aaKnown RBP18.14■□□□□ 0.49
PTPA-207ENST00000393370 C11orf63Q6NUN7 778 aa18.14■□□□□ 0.49
PTPA-207ENST00000393370 DGKHQ86XP1 1220 aa18.14■□□□□ 0.49
PTPA-207ENST00000393370 SLC35C1Q96A29 364 aa18.14■□□□□ 0.49
PTPA-207ENST00000393370 DGCR14Q96DF8 476 aaKnown RBP18.14■□□□□ 0.49
PTPA-207ENST00000393370 CCDC77Q9BR77 488 aa18.14■□□□□ 0.49
PTPA-207ENST00000393370 LRRC19Q9H756 370 aa18.14■□□□□ 0.49
PTPA-207ENST00000393370 KIAA1586Q9HCI6 787 aa18.14■□□□□ 0.49
PTPA-207ENST00000393370 BMP2KQ9NSY1 1161 aaPredicted RBP18.14■□□□□ 0.49
PTPA-207ENST00000393370 E9PMD0 336 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 RARBP10826 455 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 CASP4P49662 377 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 EMP3P54852 163 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 LRRC36Q1X8D7 754 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 SH3D19Q5HYK7 790 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 CYP4F22Q6NT55 531 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 PPP4R3CPQ6ZMV5 832 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 ANKFY1Q9P2R3 1169 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 WDR91A4D1P6 747 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 SPDYE16A6NNV3 312 aaPredicted RBP18.13■□□□□ 0.49
PTPA-207ENST00000393370 ATF3P18847 181 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 TNFAIP3P21580 790 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 PIK3CAP42336 1068 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 TFAP4Q01664 338 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 GRM2Q14416 872 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 SPTY2D1Q68D10 685 aaPredicted RBP18.13■□□□□ 0.49
PTPA-207ENST00000393370 RIPOR1Q6ZS17 1223 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 NCCRP1Q6ZVX7 275 aaPredicted RBP18.13■□□□□ 0.49
PTPA-207ENST00000393370 TTC7BQ86TV6 843 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 C12orf50Q8NA57 414 aaPredicted RBP18.13■□□□□ 0.49
PTPA-207ENST00000393370 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.13■□□□□ 0.492e-10■■■□□ 19
PTPA-207ENST00000393370 ZNF398Q8TD17 642 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 ZNF384Q8TF68 577 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 TUBB6Q9BUF5 446 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 RAB34Q9BZG1 259 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 C6orf50Q9HD87 102 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 INIPQ9NRY2 104 aa18.13■□□□□ 0.49
PTPA-207ENST00000393370 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.12■□□□□ 0.49
PTPA-207ENST00000393370 BUD23O43709 281 aaKnown RBP18.12■□□□□ 0.49
PTPA-207ENST00000393370 EDIL3O43854 480 aa18.12■□□□□ 0.49
PTPA-207ENST00000393370 PDE8AO60658 829 aa18.12■□□□□ 0.49
PTPA-207ENST00000393370 TROVE2P10155 538 aaKnown RBP eCLIP18.12■□□□□ 0.49
PTPA-207ENST00000393370 LVRNQ6Q4G3 990 aa18.12■□□□□ 0.49
PTPA-207ENST00000393370 RASSF3Q86WH2 238 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms