RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 KREMEN1Q96MU8 473 aa11.8□□□□□ -0.52
FAM239A-201ENST00000381108 SPC25Q9HBM1 224 aa11.8□□□□□ -0.52
FAM239A-201ENST00000381108 XPNPEP3Q9NQH7 507 aa11.8□□□□□ -0.52
FAM239A-201ENST00000381108 SEPT11Q9NVA2 429 aaKnown RBP11.8□□□□□ -0.52
FAM239A-201ENST00000381108 BZW2Q9Y6E2 419 aaKnown RBP11.8□□□□□ -0.52
FAM239A-201ENST00000381108 VNN1O95497 513 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 C4BPAP04003 597 aaKnown RBP11.79□□□□□ -0.52
FAM239A-201ENST00000381108 PRKCIP41743 596 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 TFAMQ00059 246 aaKnown RBP11.79□□□□□ -0.52
FAM239A-201ENST00000381108 FAM187BQ17R55 369 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 SCARA3Q6AZY7 606 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 ZNF410Q86VK4 478 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 HELQQ8TDG4 1101 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 DHX38Q92620 1227 aaKnown RBP11.79□□□□□ -0.52
FAM239A-201ENST00000381108 PACSIN1Q9BY11 444 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 ADAMTS10Q9H324 1103 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 ACP6Q9NPH0 428 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 C1orf112Q9NSG2 853 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 SRRDQ9UH36 339 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 ANK1P16157 1881 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 SMIM35A0A1B0GVV1 85 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 GPR32O75388 356 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 MFAP3P55082 362 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 ADAM17P78536 824 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 ENPEPQ07075 957 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 FAM47CQ5HY64 1035 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 VPS36Q86VN1 386 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 GLYCTKQ8IVS8 523 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 RAET1EQ8TD07 263 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 UBXN4Q92575 508 aa11.79□□□□□ -0.52
FAM239A-201ENST00000381108 GCOM2Q9BZD3 368 aaPredicted RBP11.79□□□□□ -0.52
FAM239A-201ENST00000381108 TMCO5BA8MYB1 307 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 CHRM1P11229 460 aaPredicted RBP11.78□□□□□ -0.52
FAM239A-201ENST00000381108 WDR44Q5JSH3 913 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 CATSPER4Q7RTX7 472 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 WDR49Q8IV35 697 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 EFCAB13Q8IY85 973 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 SLC20A1Q8WUM9 679 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 MTG1Q9BT17 334 aaPredicted RBP11.78□□□□□ -0.52
FAM239A-201ENST00000381108 TSGA10Q9BZW7 698 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 RPF1Q9H9Y2 349 aaKnown RBP11.78□□□□□ -0.52
FAM239A-201ENST00000381108 MYO1AQ9UBC5 1043 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 NAGPAQ9UK23 515 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 DDX3XO00571 662 aaKnown RBP eCLIP11.78□□□□□ -0.52
FAM239A-201ENST00000381108 CYP26A1O43174 497 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 TMEM191BP0C7N4 346 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 CCDC172P0C7W6 258 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 STAG3L1P0CL83 205 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 KRT5P13647 590 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 MAP2K2P36507 400 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 NAP1L1P55209 391 aaKnown RBP11.78□□□□□ -0.52
FAM239A-201ENST00000381108 FAM193AP78312 1265 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 NCOA4Q13772 614 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 NBPF20Q3BBV1 942 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 SRGAP1Q7Z6B7 1085 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 TMEM130Q8N3G9 435 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 LNX1Q8TBB1 728 aaPredicted RBP11.78□□□□□ -0.52
FAM239A-201ENST00000381108 U2AF1L4Q8WU68 220 aaKnown RBP11.78□□□□□ -0.52
FAM239A-201ENST00000381108 TMEM40Q8WWA1 233 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 SECISBP2LQ93073 1101 aaKnown RBP11.78□□□□□ -0.52
FAM239A-201ENST00000381108 DAAM1Q9Y4D1 1078 aa11.78□□□□□ -0.52
FAM239A-201ENST00000381108 SCN10AQ9Y5Y9 1956 aa11.77□□□□□ -0.52
FAM239A-201ENST00000381108 UMODL1Q5DID0 1318 aa11.77□□□□□ -0.52
FAM239A-201ENST00000381108 ENC1O14682 589 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 ATP8B1O43520 1251 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 BUB1O43683 1085 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 ADAMTS4O75173 837 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 MOCS3O95396 460 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 HMGCRP04035 888 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 ASGR1P07306 291 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 MCF2P10911 925 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 GNAT1P11488 350 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 HOXD10P28358 340 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 ELF2Q15723 593 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 KCNA10Q16322 511 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 TAF3Q5VWG9 929 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 ALKBH5Q6P6C2 394 aaKnown RBP11.77□□□□□ -0.53
FAM239A-201ENST00000381108 TRAPPC11Q7Z392 1133 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 SLC47A2Q86VL8 602 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 ADPGKQ9BRR6 497 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 UPF3AQ9H1J1 476 aaKnown RBP11.77□□□□□ -0.53
FAM239A-201ENST00000381108 APOBEC3GQ9HC16 384 aaKnown RBP11.77□□□□□ -0.53
FAM239A-201ENST00000381108 LUC7LQ9NQ29 371 aaKnown RBP11.77□□□□□ -0.53
FAM239A-201ENST00000381108 SALL4Q9UJQ4 1053 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 TSKSQ9UJT2 592 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 CAPN6Q9Y6Q1 641 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 THSD7BQ9C0I4 1608 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 CTAGE9A4FU28 777 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 SGPL1O95470 568 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 NPTXRO95502 500 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 CST3P01034 146 aaPredicted RBP11.77□□□□□ -0.53
FAM239A-201ENST00000381108 CALCAP01258 141 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 NFICP08651 508 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 DARSP14868 501 aaKnown RBP11.77□□□□□ -0.53
FAM239A-201ENST00000381108 NOP14P78316 857 aaKnown RBP11.77□□□□□ -0.53
FAM239A-201ENST00000381108 BMS1Q14692 1282 aaKnown RBP11.77□□□□□ -0.53
FAM239A-201ENST00000381108 DUOXA2Q1HG44 320 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 GDF6Q6KF10 455 aaPredicted RBP11.77□□□□□ -0.53
FAM239A-201ENST00000381108 ZNF662Q6ZS27 426 aa11.77□□□□□ -0.53
FAM239A-201ENST00000381108 PALB2Q86YC2 1186 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms