RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 DCAF12L1Q5VU92 463 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 TDRD10Q5VZ19 366 aaKnown RBP13.52□□□□□ -0.24
VPS16-202ENST00000380445 PPP1R2P3Q6NXS1 205 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 CRELD2Q6UXH1 353 aaPredicted RBP13.52□□□□□ -0.24
VPS16-202ENST00000380445 EEPD1Q7L9B9 569 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 PLPPR4Q7Z2D5 763 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 TSEN2Q8NCE0 465 aaKnown RBP13.52□□□□□ -0.24
VPS16-202ENST00000380445 FAM76AQ8TAV0 307 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 CDCA5Q96FF9 252 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 PLVAPQ9BX97 442 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 PLEKHA4Q9H4M7 779 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 ACP6Q9NPH0 428 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 GOLGA6AQ9NYA3 693 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 TRPC6Q9Y210 931 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 RRP15Q9Y3B9 282 aaKnown RBP13.52□□□□□ -0.24
VPS16-202ENST00000380445 SIP14410 1827 aa13.52□□□□□ -0.25
VPS16-202ENST00000380445 POTEJP0CG39 1038 aa13.52□□□□□ -0.25
VPS16-202ENST00000380445 ITGA4P13612 1032 aa13.52□□□□□ -0.25
VPS16-202ENST00000380445 COMTP21964 271 aa13.52□□□□□ -0.25
VPS16-202ENST00000380445 ACTN2P35609 894 aa13.52□□□□□ -0.25
VPS16-202ENST00000380445 SLC26A2P50443 739 aa13.52□□□□□ -0.25
VPS16-202ENST00000380445 CELF3Q5SZQ8 465 aaKnown RBP13.52□□□□□ -0.25
VPS16-202ENST00000380445 ZBTB8OSQ8IWT0 167 aa13.52□□□□□ -0.25
VPS16-202ENST00000380445 PRPF31Q8WWY3 499 aaKnown RBP13.52□□□□□ -0.25
VPS16-202ENST00000380445 CLMNQ96JQ2 1002 aa13.52□□□□□ -0.25
VPS16-202ENST00000380445 MMP19Q99542 508 aa13.52□□□□□ -0.25
VPS16-202ENST00000380445 SYT17Q9BSW7 474 aa13.52□□□□□ -0.25
VPS16-202ENST00000380445 MRPL4Q9BYD3 311 aaKnown RBP13.52□□□□□ -0.25
VPS16-202ENST00000380445 C2orf40Q9H1Z8 148 aa13.52□□□□□ -0.25
VPS16-202ENST00000380445 ADGRA2Q96PE1 1338 aa13.52□□□□□ -0.25
VPS16-202ENST00000380445 TMEM110-MUSTN1A8MSY1 372 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 SPOPO43791 374 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 LGR5O75473 907 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 FAM153BP0C7A2 387 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 DHX34Q14147 1143 aaKnown RBP13.51□□□□□ -0.25
VPS16-202ENST00000380445 FAM153CQ494X1 144 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 TRIM72Q6ZMU5 477 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 IQCKQ8N0W5 287 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 SEC14L1Q92503 715 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 ALG3Q92685 438 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 ZBTB45Q96K62 511 aaPredicted RBP13.51□□□□□ -0.25
VPS16-202ENST00000380445 IMPG2Q9BZV3 1241 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.51□□□□□ -0.25
VPS16-202ENST00000380445 RBPJLQ9UBG7 517 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 CNOT8Q9UFF9 292 aaKnown RBP13.51□□□□□ -0.25
VPS16-202ENST00000380445 FAM153AQ9UHL3 310 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 GRIN3BO60391 1043 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 TOM1L1O75674 476 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 HSPA9P38646 679 aaKnown RBP13.51□□□□□ -0.25
VPS16-202ENST00000380445 GUCY2FP51841 1108 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 GRM1Q13255 1194 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 SURF1Q15526 300 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 ARMC9Q7Z3E5 817 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 ATP8B4Q8TF62 1192 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 ZIM3Q96PE6 472 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 GPR20Q99678 358 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 HAPLN2Q9GZV7 340 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 RASAL2Q9UJF2 1139 aa13.51□□□□□ -0.25
VPS16-202ENST00000380445 DNAJC25-GNG10A0A024R161 153 aa13.5□□□□□ -0.25
VPS16-202ENST00000380445 FAM187AA6NFU0 413 aa13.5□□□□□ -0.25
VPS16-202ENST00000380445 UNGP13051 313 aaPredicted RBP13.5□□□□□ -0.25
VPS16-202ENST00000380445 CTNNA2P26232 953 aa13.5□□□□□ -0.25
VPS16-202ENST00000380445 CTNNA1P35221 906 aaKnown RBP13.5□□□□□ -0.25
VPS16-202ENST00000380445 CUL2Q13617 745 aa13.5□□□□□ -0.25
VPS16-202ENST00000380445 LMBRD2Q68DH5 695 aaPredicted RBP13.5□□□□□ -0.25
VPS16-202ENST00000380445 CD302Q8IX05 232 aa13.5□□□□□ -0.25
VPS16-202ENST00000380445 RUNDC3BQ96NL0 473 aa13.5□□□□□ -0.25
VPS16-202ENST00000380445 AVENQ9NQS1 362 aaPredicted RBP13.5□□□□□ -0.25
VPS16-202ENST00000380445 TTI1O43156 1089 aa13.5□□□□□ -0.25
VPS16-202ENST00000380445 PEX5P50542 639 aa13.5□□□□□ -0.25
VPS16-202ENST00000380445 DR1Q01658 176 aa13.5□□□□□ -0.25
VPS16-202ENST00000380445 POU5F1Q01860 360 aaKnown RBP13.5□□□□□ -0.25
VPS16-202ENST00000380445 ZNF211Q13398 564 aaPredicted RBP13.5□□□□□ -0.25
VPS16-202ENST00000380445 MAPK6Q16659 721 aa13.5□□□□□ -0.25
VPS16-202ENST00000380445 TTC31Q49AM3 519 aaPredicted RBP13.5□□□□□ -0.25
VPS16-202ENST00000380445 CDCA2Q69YH5 1023 aaPredicted RBP13.5□□□□□ -0.25
VPS16-202ENST00000380445 GTF3C2Q8WUA4 911 aaPredicted RBP13.5□□□□□ -0.25
VPS16-202ENST00000380445 CD101Q93033 1021 aa13.5□□□□□ -0.25
VPS16-202ENST00000380445 OPTNQ96CV9 577 aa13.5□□□□□ -0.25
VPS16-202ENST00000380445 TCHPQ9BT92 498 aa13.5□□□□□ -0.25
VPS16-202ENST00000380445 MTUS1Q9ULD2 1270 aa13.5□□□□□ -0.25
VPS16-202ENST00000380445 PCDHA3Q9Y5H8 950 aa13.5□□□□□ -0.25
VPS16-202ENST00000380445 FAM170AA1A519 330 aa13.49□□□□□ -0.25
VPS16-202ENST00000380445 A6NNZ2 444 aa13.49□□□□□ -0.25
VPS16-202ENST00000380445 ATMINO43313 823 aaPredicted RBP13.49□□□□□ -0.25
VPS16-202ENST00000380445 ERLIN2O94905 339 aa13.49□□□□□ -0.25
VPS16-202ENST00000380445 VNN1O95497 513 aa13.49□□□□□ -0.25
VPS16-202ENST00000380445 PGK2P07205 417 aa13.49□□□□□ -0.25
VPS16-202ENST00000380445 CHRNA3P32297 505 aa13.49□□□□□ -0.25
VPS16-202ENST00000380445 NSFP46459 744 aaKnown RBP13.49□□□□□ -0.25
VPS16-202ENST00000380445 MTMR3Q13615 1198 aa13.49□□□□□ -0.25
VPS16-202ENST00000380445 TUBB8Q3ZCM7 444 aa13.49□□□□□ -0.25
VPS16-202ENST00000380445 SMYD5Q6GMV2 418 aa13.49□□□□□ -0.25
VPS16-202ENST00000380445 WDR49Q8IV35 697 aa13.49□□□□□ -0.25
VPS16-202ENST00000380445 BRSK2Q8IWQ3 736 aa13.49□□□□□ -0.25
VPS16-202ENST00000380445 EFCAB13Q8IY85 973 aa13.49□□□□□ -0.25
VPS16-202ENST00000380445 SPATA33Q96N06 139 aa13.49□□□□□ -0.25
VPS16-202ENST00000380445 SMARCAD1Q9H4L7 1026 aa13.49□□□□□ -0.25
VPS16-202ENST00000380445 TXNRD2Q9NNW7 524 aa13.49□□□□□ -0.25
VPS16-202ENST00000380445 CNTNAP2Q9UHC6 1331 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms