RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 ZSWIM1Q9BR11 485 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 TEKT3Q9BXF9 490 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 ADAM7Q9H2U9 754 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 OLFML3Q9NRN5 406 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 SLC16A3O15427 465 aaKnown RBP13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 ADRB2P07550 413 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 STXBP4Q6ZWJ1 553 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 GSTA5Q7RTV2 222 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 LDHDQ86WU2 507 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 TAS1R2Q8TE23 839 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 TLCD1Q96CP7 247 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 FIZ1Q96SL8 496 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 GRHL1Q9NZI5 618 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 LARSQ9P2J5 1176 aaKnown RBP13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 PHF2O75151 1096 aa13.27□□□□□ -0.28
PRPF40B-202ENST00000380281 COQ9O75208 318 aa13.27□□□□□ -0.28
PRPF40B-202ENST00000380281 ITGB5P18084 799 aa13.27□□□□□ -0.28
PRPF40B-202ENST00000380281 ERFP50548 548 aa13.27□□□□□ -0.28
PRPF40B-202ENST00000380281 SPOPLQ6IQ16 392 aa13.27□□□□□ -0.28
PRPF40B-202ENST00000380281 HHIPL2Q6UWX4 724 aa13.27□□□□□ -0.28
PRPF40B-202ENST00000380281 SLC5A5Q92911 643 aa13.27□□□□□ -0.28
PRPF40B-202ENST00000380281 CRAMP1Q96RY5 1269 aa13.27□□□□□ -0.28
PRPF40B-202ENST00000380281 NAP1L3Q99457 506 aaPredicted RBP13.27□□□□□ -0.28
PRPF40B-202ENST00000380281 POLR3CQ9BUI4 534 aaPredicted RBP13.27□□□□□ -0.28
PRPF40B-202ENST00000380281 TMEM39BQ9GZU3 492 aa13.27□□□□□ -0.28
PRPF40B-202ENST00000380281 TMEM117Q9H0C3 514 aa13.27□□□□□ -0.28
PRPF40B-202ENST00000380281 KCNH7Q9NS40 1196 aa13.27□□□□□ -0.28
PRPF40B-202ENST00000380281 CCPG1Q9ULG6 757 aa13.27□□□□□ -0.28
PRPF40B-202ENST00000380281 TMEM120BA0PK00 339 aa13.27□□□□□ -0.29
PRPF40B-202ENST00000380281 POC1B-GALNT4F8VUJ3 575 aa13.27□□□□□ -0.29
PRPF40B-202ENST00000380281 SMAPO00193 183 aa13.27□□□□□ -0.29
PRPF40B-202ENST00000380281 SNX3O60493 162 aa13.27□□□□□ -0.29
PRPF40B-202ENST00000380281 PPFIA2O75334 1257 aa13.27□□□□□ -0.29
PRPF40B-202ENST00000380281 SP100P23497 879 aaPredicted RBP13.27□□□□□ -0.29
PRPF40B-202ENST00000380281 SESN3P58005 492 aa13.27□□□□□ -0.29
PRPF40B-202ENST00000380281 FITM2Q8N6M3 262 aa13.27□□□□□ -0.29
PRPF40B-202ENST00000380281 TEX9Q8N6V9 391 aa13.27□□□□□ -0.29
PRPF40B-202ENST00000380281 OLIG1Q8TAK6 271 aa13.27□□□□□ -0.29
PRPF40B-202ENST00000380281 CERKQ8TCT0 537 aa13.27□□□□□ -0.29
PRPF40B-202ENST00000380281 CRYGNQ8WXF5 182 aa13.27□□□□□ -0.29
PRPF40B-202ENST00000380281 KREMEN1Q96MU8 473 aa13.27□□□□□ -0.29
PRPF40B-202ENST00000380281 CDC42EP4Q9H3Q1 356 aaKnown RBP13.27□□□□□ -0.29
PRPF40B-202ENST00000380281 RAVER2Q9HCJ3 691 aaKnown RBP13.27□□□□□ -0.29
PRPF40B-202ENST00000380281 MTUS1Q9ULD2 1270 aa13.27□□□□□ -0.29
PRPF40B-202ENST00000380281 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.27□□□□□ -0.29
PRPF40B-202ENST00000380281 ZHX2Q9Y6X8 837 aa13.27□□□□□ -0.29
PRPF40B-202ENST00000380281 GOLGA8SH3BPF8 625 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 GOLGA8MH3BSY2 632 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 THAP12O43422 761 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 CD58P19256 250 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 COILP38432 576 aaPredicted RBP13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 UGCGQ16739 394 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 ZNF394Q53GI3 561 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 CYFIP1Q7L576 1253 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 XXYLT1Q8NBI6 393 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 POMGNT1Q8WZA1 660 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 HERPUD2Q9BSE4 406 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 C10orf88Q9H8K7 445 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 ETNK1Q9HBU6 452 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 ARHGEF3Q9NR81 526 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 ASB3Q9Y575 518 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 STRCQ7RTU9 1775 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 RIPK2O43353 540 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 MAPK4P31152 587 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 MRPS35P82673 323 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 ATP13A4Q4VNC1 1196 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 C1QTNF12Q5T7M4 302 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 SLC13A5Q86YT5 568 aaPredicted RBP13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 EPS8L1Q8TE68 723 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 FBF1Q8TES7 1133 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 ZNF668Q96K58 619 aaPredicted RBP13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 COL20A1Q9P218 1284 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 FZD1Q9UP38 647 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 R3HDM2Q9Y2K5 976 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 TELO2Q9Y4R8 837 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 WDR91A4D1P6 747 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 TBX3O15119 743 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 NPTXRO95502 500 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 CNGA1P29973 690 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 NT5C2P49902 561 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 BNIP1Q12981 228 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 AUHQ13825 339 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 ARHGAP27Q6ZUM4 889 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 EXOC3L1Q86VI1 746 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 ZC3H3Q8IXZ2 948 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 ZDHHC15Q96MV8 337 aa13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 USP15Q9Y4E8 981 aaPredicted RBP13.26□□□□□ -0.29
PRPF40B-202ENST00000380281 BTNL10A8MVZ5 291 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 IFNB1P01574 187 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 PTGIRP43119 386 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 PLCB3Q01970 1234 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 KLC1Q07866 573 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 RASA3Q14644 834 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 FOXB2Q5VYV0 432 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 MKL1Q969V6 931 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 CENPTQ96BT3 561 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 MBOAT7Q96N66 472 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 PFASO15067 1338 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 A0A0A6YYK5 440 aaPredicted RBP13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 ATP9AO75110 1047 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms