RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 OSGEPQ9NPF4 335 aa21.35■■□□□ 1.01
PDLIM5-205ENST00000380180 NCANO14594 1321 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 A6NJR5 290 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 FAM155AB1AL88 458 aaPredicted RBP21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 FTLP02792 175 aaPredicted RBP21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 RHOXF2BP0C7M4 288 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 PDE6CP51160 858 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 AP3M2P53677 418 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 OSTNP61366 133 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 FMO1Q01740 532 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 IRF5Q13568 498 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 FAM187BQ17R55 369 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 LMBR1Q8WVP7 490 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 RFFLQ8WZ73 363 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 RHOXF2Q9BQY4 288 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 ZFYVE28Q9HCC9 887 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 ARGLU1Q9NWB6 273 aaPredicted RBP21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 CST3P01034 146 aaPredicted RBP21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 CDR2Q01850 454 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 OLFML2BQ68BL8 750 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 CEP120Q8N960 986 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 MSANTD4Q8NCY6 345 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 DDX1Q92499 740 aaKnown RBP21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 ARHGEF26Q96DR7 871 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 PDCL3Q9H2J4 239 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 SETD4Q9NVD3 440 aa21.34■■□□□ 1.01
PDLIM5-205ENST00000380180 RTN2O75298 545 aa21.33■■□□□ 1.01
PDLIM5-205ENST00000380180 GZMAP12544 262 aa21.33■■□□□ 1.01
PDLIM5-205ENST00000380180 DNA2P51530 1060 aa21.33■■□□□ 1.01
PDLIM5-205ENST00000380180 NCOA4Q13772 614 aa21.33■■□□□ 1.01
PDLIM5-205ENST00000380180 SURF1Q15526 300 aa21.33■■□□□ 1.01
PDLIM5-205ENST00000380180 AMHR2Q16671 573 aa21.33■■□□□ 1.01
PDLIM5-205ENST00000380180 LENG1Q96BZ8 264 aaPredicted RBP21.33■■□□□ 1.01
PDLIM5-205ENST00000380180 CDT1Q9H211 546 aa21.33■■□□□ 1.01
PDLIM5-205ENST00000380180 GJD2Q9UKL4 321 aa21.33■■□□□ 1.01
PDLIM5-205ENST00000380180 TLL2Q9Y6L7 1015 aa21.33■■□□□ 1.01
PDLIM5-205ENST00000380180 CITO14578 2027 aa21.33■■□□□ 1
PDLIM5-205ENST00000380180 RGS2P41220 211 aa21.33■■□□□ 1
PDLIM5-205ENST00000380180 CRHR2Q13324 411 aa21.33■■□□□ 1
PDLIM5-205ENST00000380180 SLFN11Q7Z7L1 901 aa21.33■■□□□ 1
PDLIM5-205ENST00000380180 KIAA0319LQ8IZA0 1049 aa21.33■■□□□ 1
PDLIM5-205ENST00000380180 NLRP7Q8WX94 980 aa21.33■■□□□ 1
PDLIM5-205ENST00000380180 MTMR12Q9C0I1 747 aa21.33■■□□□ 1
PDLIM5-205ENST00000380180 NUB1Q9Y5A7 615 aa21.33■■□□□ 1
PDLIM5-205ENST00000380180 TRIP11Q15643 1979 aa21.32■■□□□ 1
PDLIM5-205ENST00000380180 GPR25O00155 361 aa21.32■■□□□ 1
PDLIM5-205ENST00000380180 ZEB2O60315 1214 aa21.32■■□□□ 1
PDLIM5-205ENST00000380180 CALCAP01258 141 aa21.32■■□□□ 1
PDLIM5-205ENST00000380180 IRX5P78411 483 aaPredicted RBP21.32■■□□□ 1
PDLIM5-205ENST00000380180 CUL2Q13617 745 aa21.32■■□□□ 1
PDLIM5-205ENST00000380180 DUOXA2Q1HG44 320 aa21.32■■□□□ 1
PDLIM5-205ENST00000380180 CCDC181Q5TID7 509 aa21.32■■□□□ 1
PDLIM5-205ENST00000380180 ZNF572Q7Z3I7 529 aaPredicted RBP21.32■■□□□ 1
PDLIM5-205ENST00000380180 TLK2Q86UE8 772 aa21.32■■□□□ 1
PDLIM5-205ENST00000380180 PNKPQ96T60 521 aa21.32■■□□□ 1
PDLIM5-205ENST00000380180 EHD2Q9NZN4 543 aa21.32■■□□□ 1
PDLIM5-205ENST00000380180 PCNTO95613 3336 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 RRP9O43818 475 aaKnown RBP21.31■■□□□ 1
PDLIM5-205ENST00000380180 ACO1P21399 889 aaKnown RBP21.31■■□□□ 1
PDLIM5-205ENST00000380180 NOP14P78316 857 aaKnown RBP21.31■■□□□ 1
PDLIM5-205ENST00000380180 RPS6KA1Q15418 735 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 DAAM2Q86T65 1068 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 TMEM192Q8IY95 271 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 CPB2Q96IY4 423 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 MS4A14Q96JA4 679 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 ZNF446Q9NWS9 450 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 SMARCAL1Q9NZC9 954 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 DCAF8L1A6NGE4 600 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 RRN3P2A6NIE6 340 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 TNPO2O14787 897 aaKnown RBP21.31■■□□□ 1
PDLIM5-205ENST00000380180 KIF4AO95239 1232 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 CLTAP09496 248 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 PAFAH1B1P43034 410 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 C2orf54Q08AI8 447 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 SREBF2Q12772 1141 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 PTPROQ16827 1216 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 SYCE1Q8N0S2 351 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 PPP1R13LQ8WUF5 828 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 KAT2BQ92831 832 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 CCDC102AQ96A19 550 aa21.31■■□□□ 1
PDLIM5-205ENST00000380180 UMODL1Q5DID0 1318 aa21.3■■□□□ 1
PDLIM5-205ENST00000380180 BUB1BO60566 1050 aaPredicted RBP21.3■■□□□ 1
PDLIM5-205ENST00000380180 CLSTN1O94985 981 aa21.3■■□□□ 1
PDLIM5-205ENST00000380180 F2P00734 622 aa21.3■■□□□ 1
PDLIM5-205ENST00000380180 ARF4P18085 180 aaPredicted RBP21.3■■□□□ 1
PDLIM5-205ENST00000380180 GPC5P78333 572 aa21.3■■□□□ 1
PDLIM5-205ENST00000380180 TFAMQ00059 246 aaKnown RBP21.3■■□□□ 1
PDLIM5-205ENST00000380180 PEX26Q7Z412 305 aa21.3■■□□□ 1
PDLIM5-205ENST00000380180 SPATA4Q8NEY3 305 aa21.3■■□□□ 1
PDLIM5-205ENST00000380180 SCLT1Q96NL6 688 aa21.3■■□□□ 1
PDLIM5-205ENST00000380180 ZIC5Q96T25 663 aa21.3■■□□□ 1
PDLIM5-205ENST00000380180 APBA2Q99767 749 aa21.3■■□□□ 1
PDLIM5-205ENST00000380180 PDZD7Q9H5P4 517 aa21.3■■□□□ 1
PDLIM5-205ENST00000380180 RPF1Q9H9Y2 349 aaKnown RBP21.3■■□□□ 1
PDLIM5-205ENST00000380180 COG5Q9UP83 839 aa21.3■■□□□ 1
PDLIM5-205ENST00000380180 STXBP5LQ9Y2K9 1186 aa21.3■■□□□ 1
PDLIM5-205ENST00000380180 PCDHB2Q9Y5E7 798 aa21.3■■□□□ 1
PDLIM5-205ENST00000380180 B4GALT4O60513 344 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 ASS1P00966 412 aaKnown RBP21.29■■□□□ 1
PDLIM5-205ENST00000380180 TBXAS1P24557 533 aaPredicted RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms