RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 PLEKHO2Q8TD55 490 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 CCDC17Q96LX7 622 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 PRICKLE1Q96MT3 831 aaPredicted RBP7.95□□□□□ -1.14
CDKL5-201ENST00000379989 ECSITQ9BQ95 431 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 NEURL2Q9BR09 285 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 SPZ1Q9BXG8 430 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 PSME4Q14997 1843 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 FUOMA2VDF0 154 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 TNFRSF10AO00220 468 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 PGM3O95394 542 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 MZF1P28698 734 aaPredicted RBP7.94□□□□□ -1.14
CDKL5-201ENST00000379989 TOB1P50616 345 aaPredicted RBP7.94□□□□□ -1.14
CDKL5-201ENST00000379989 POLGP54098 1239 aaPredicted RBP7.94□□□□□ -1.14
CDKL5-201ENST00000379989 E2F2Q14209 437 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 GPR162Q16538 588 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 ARL13BQ3SXY8 428 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 TNFAIP8L3Q5GJ75 292 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 RRAGBQ5VZM2 374 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 C16orf86Q6ZW13 317 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 ACAD11Q709F0 780 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 MICU3Q86XE3 530 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 SIX5Q8N196 739 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 GIPC3Q8TF64 312 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 SCFD2Q8WU76 684 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 SLC26A6Q9BXS9 759 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 RTFDC1Q9BY42 306 aaPredicted RBP7.94□□□□□ -1.14
CDKL5-201ENST00000379989 CCDC113Q9H0I3 377 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 CUEDC2Q9H467 287 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 AIPL1Q9NZN9 384 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 TELO2Q9Y4R8 837 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 NUMBLQ9Y6R0 609 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 COL4A1P02462 1669 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 FAM47E-STBD1D6RA91 191 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 GOLGA8TH3BQL2 631 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 DDX3XO00571 662 aaKnown RBP eCLIP7.94□□□□□ -1.14
CDKL5-201ENST00000379989 PPEF1O14829 653 aaPredicted RBP7.94□□□□□ -1.14
CDKL5-201ENST00000379989 PALMO75781 387 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 GOLGA8HP0CJ92 632 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 SRGNP10124 158 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 EIF4A3P38919 411 aaKnown RBP7.94□□□□□ -1.14
CDKL5-201ENST00000379989 PRCPP42785 496 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 GFPT1Q06210 699 aaPredicted RBP7.94□□□□□ -1.14
CDKL5-201ENST00000379989 FUT2Q10981 343 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 UBAP2Q5T6F2 1119 aaKnown RBP7.94□□□□□ -1.14
CDKL5-201ENST00000379989 CACTIN-AS1Q8N1I8 211 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 NEDD1Q8NHV4 660 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 CKAP2Q8WWK9 683 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 VPS50Q96JG6 964 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 DDX47Q9H0S4 455 aaKnown RBP7.94□□□□□ -1.14
CDKL5-201ENST00000379989 RBM38Q9H0Z9 239 aaKnown RBP7.94□□□□□ -1.14
CDKL5-201ENST00000379989 EBF3Q9H4W6 596 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 MLXIPLQ9NP71 852 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 AASDHPPTQ9NRN7 309 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 USP17L12C9JPN9 530 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 USP17L21D6R901 530 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 PTPN4P29074 926 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 MAGEA1P43355 309 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 RASSF2P50749 326 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 YARSP54577 528 aaKnown RBP7.94□□□□□ -1.14
CDKL5-201ENST00000379989 CSE1LP55060 971 aaKnown RBP7.94□□□□□ -1.14
CDKL5-201ENST00000379989 COG7P83436 770 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 MTFR1Q15390 333 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 PFKFB3Q16875 520 aaPredicted RBP7.94□□□□□ -1.14
CDKL5-201ENST00000379989 MYLK3Q32MK0 819 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 MEI1Q5TIA1 1274 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 ZNF444Q8N0Y2 327 aaPredicted RBP7.94□□□□□ -1.14
CDKL5-201ENST00000379989 KCTD17Q8N5Z5 321 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 SEC14L1Q92503 715 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 CADM1Q9BY67 442 aaKnown RBP7.94□□□□□ -1.14
CDKL5-201ENST00000379989 TANGO6Q9C0B7 1094 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 FHDC1Q9C0D6 1143 aaPredicted RBP7.94□□□□□ -1.14
CDKL5-201ENST00000379989 CSRNP2Q9H175 543 aa7.94□□□□□ -1.14
CDKL5-201ENST00000379989 TRIM75PA6NK02 468 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 UBL4AP11441 157 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 ENPP1P22413 925 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 CDC16Q13042 620 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 ZNF423Q2M1K9 1284 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 PPP2R2DQ66LE6 453 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 ESX1Q8N693 406 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 EPS8L3Q8TE67 593 aaKnown RBP7.93□□□□□ -1.14
CDKL5-201ENST00000379989 ARHGEF2Q92974 986 aaKnown RBP7.93□□□□□ -1.14
CDKL5-201ENST00000379989 LRRC37BQ96QE4 947 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 AP1M1Q9BXS5 423 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 GINM1Q9NU53 330 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 HOXC10Q9NYD6 342 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 ZNHIT2Q9UHR6 403 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 NR2E3Q9Y5X4 410 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 IVNS1ABPQ9Y6Y0 642 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 TRIM49BA6NDI0 452 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 TTC34A8MYJ7 566 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 MINDY4BA8MYZ0 360 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 TEX28O15482 410 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 RANBP6O60518 1105 aaKnown RBP7.93□□□□□ -1.14
CDKL5-201ENST00000379989 UFL1O94874 794 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 SMIM18P0DKX4 95 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 CREB1P16220 341 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 CRABP2P29373 138 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 SLC5A2P31639 672 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 SLCO1A2P46721 670 aa7.93□□□□□ -1.14
CDKL5-201ENST00000379989 DNM2P50570 870 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms