RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 CDK17Q00537 523 aa16.69■□□□□ 0.26
BRF1-203ENST00000379937 RAB6CQ53S08 254 aa16.69■□□□□ 0.26
BRF1-203ENST00000379937 RNF10Q8N5U6 811 aaKnown RBP16.69■□□□□ 0.26
BRF1-203ENST00000379937 AFG1LQ8WV93 481 aa16.69■□□□□ 0.26
BRF1-203ENST00000379937 SLC10A4Q96EP9 437 aa16.69■□□□□ 0.26
BRF1-203ENST00000379937 FDXACB1Q9BRP7 624 aaPredicted RBP16.69■□□□□ 0.26
BRF1-203ENST00000379937 RAB6CQ9H0N0 254 aa16.69■□□□□ 0.26
BRF1-203ENST00000379937 R3HDM2Q9Y2K5 976 aaKnown RBP16.69■□□□□ 0.26
BRF1-203ENST00000379937 DAAM1Q9Y4D1 1078 aa16.69■□□□□ 0.26
BRF1-203ENST00000379937 DGAT1O75907 488 aa16.69■□□□□ 0.26
BRF1-203ENST00000379937 CSPG5O95196 566 aa16.69■□□□□ 0.26
BRF1-203ENST00000379937 EPHB4P54760 987 aa16.69■□□□□ 0.26
BRF1-203ENST00000379937 MAGOHP61326 146 aaKnown RBP16.69■□□□□ 0.26
BRF1-203ENST00000379937 ADCY2Q08462 1091 aa16.69■□□□□ 0.26
BRF1-203ENST00000379937 IFRD2Q12894 506 aaPredicted RBP16.69■□□□□ 0.26
BRF1-203ENST00000379937 NCOA4Q13772 614 aa16.69■□□□□ 0.26
BRF1-203ENST00000379937 ZKSCAN8Q15776 578 aaPredicted RBP16.69■□□□□ 0.26
BRF1-203ENST00000379937 C10orf76Q5T2E6 689 aa16.69■□□□□ 0.26
BRF1-203ENST00000379937 TTC27Q6P3X3 843 aa16.69■□□□□ 0.26
BRF1-203ENST00000379937 DDX23Q9BUQ8 820 aaKnown RBP16.69■□□□□ 0.26
BRF1-203ENST00000379937 SEMA4AQ9H3S1 761 aa16.69■□□□□ 0.26
BRF1-203ENST00000379937 CTNNA2P26232 953 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 GCLCP48506 637 aaPredicted RBP16.68■□□□□ 0.26
BRF1-203ENST00000379937 NOP14P78316 857 aaKnown RBP16.68■□□□□ 0.26
BRF1-203ENST00000379937 ATP11AP98196 1134 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 SEL1L2Q5TEA6 688 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 MCEEQ96PE7 176 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 KCNK9Q9NPC2 374 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 PIH1D1Q9NWS0 290 aaKnown RBP16.68■□□□□ 0.26
BRF1-203ENST00000379937 SUCLA2Q9P2R7 463 aaPredicted RBP16.68■□□□□ 0.26
BRF1-203ENST00000379937 F8VP50 259 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 NPM3O75607 178 aaKnown RBP16.68■□□□□ 0.26
BRF1-203ENST00000379937 GTF2BQ00403 316 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 LONRF1Q17RB8 773 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 SGO2Q562F6 1265 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 LMBR1Q8WVP7 490 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 DMAC2Q9NW81 257 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 SEL1LQ9UBV2 794 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 ANKRD62A6NC57 917 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 PJA2O43164 708 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 MAPTP10636 758 aaKnown RBP16.68■□□□□ 0.26
BRF1-203ENST00000379937 ZNF280AP59817 542 aaPredicted RBP16.68■□□□□ 0.26
BRF1-203ENST00000379937 UAP1Q16222 522 aaPredicted RBP16.68■□□□□ 0.26
BRF1-203ENST00000379937 IFI16Q16666 785 aaKnown RBP16.68■□□□□ 0.26
BRF1-203ENST00000379937 PAN2Q504Q3 1202 aaKnown RBP16.68■□□□□ 0.26
BRF1-203ENST00000379937 XKR3Q5GH77 459 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 WDR93Q6P2C0 686 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 ABHD15Q6UXT9 468 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 C12orf29Q8N999 325 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 ZBED3Q96IU2 234 aaPredicted RBP16.68■□□□□ 0.26
BRF1-203ENST00000379937 PCYT2Q99447 389 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 CAPS2Q9BXY5 557 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 IMPG2Q9BZV3 1241 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 CPA4Q9UI42 421 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 MAST2Q6P0Q8 1798 aa16.68■□□□□ 0.26
BRF1-203ENST00000379937 RALAP11233 206 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 ADCY8P40145 1251 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 LRRC31Q6UY01 552 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 APOBEC3FQ8IUX4 373 aaKnown RBP16.67■□□□□ 0.26
BRF1-203ENST00000379937 GDAP1Q8TB36 358 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 FAM71BQ8TC56 605 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 AENQ8WTP8 325 aaKnown RBP16.67■□□□□ 0.26
BRF1-203ENST00000379937 MMP19Q99542 508 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 HMGXB4Q9UGU5 601 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 PNMA2Q9UL42 364 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 BZW2Q9Y6E2 419 aaKnown RBP16.67■□□□□ 0.26
BRF1-203ENST00000379937 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.67■□□□□ 0.26
BRF1-203ENST00000379937 DOCK5Q9H7D0 1870 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 TLR3O15455 904 aaKnown RBP16.67■□□□□ 0.26
BRF1-203ENST00000379937 PPP1R37O75864 691 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 PDGFRBP09619 1106 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 CREB1P16220 341 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 BMT2Q1RMZ1 405 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 RBBP8NLQ8NC74 664 aaPredicted RBP16.67■□□□□ 0.26
BRF1-203ENST00000379937 HELQQ8TDG4 1101 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 EPS8L3Q8TE67 593 aaKnown RBP16.67■□□□□ 0.26
BRF1-203ENST00000379937 HSPH1Q92598 858 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 MIS12Q9H081 205 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 NRXN2Q9P2S2 1712 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 LRRD1A4D1F6 860 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 RARAP10276 462 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 MARSP56192 900 aaKnown RBP16.67■□□□□ 0.26
BRF1-203ENST00000379937 COBLL1Q53SF7 1204 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 MMGT1Q8N4V1 131 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.67■□□□□ 0.26
BRF1-203ENST00000379937 SYT17Q9BSW7 474 aa16.67■□□□□ 0.26
BRF1-203ENST00000379937 USP34Q70CQ2 3546 aa16.66■□□□□ 0.26
BRF1-203ENST00000379937 GOLGA6L10A0A0M3HER8 536 aa16.66■□□□□ 0.26
BRF1-203ENST00000379937 AKAP5P24588 427 aa16.66■□□□□ 0.26
BRF1-203ENST00000379937 ZNF200P98182 395 aaPredicted RBP16.66■□□□□ 0.26
BRF1-203ENST00000379937 SLC29A2Q14542 456 aa16.66■□□□□ 0.26
BRF1-203ENST00000379937 ATP8B4Q8TF62 1192 aa16.66■□□□□ 0.26
BRF1-203ENST00000379937 SLC16A10Q8TF71 515 aa16.66■□□□□ 0.26
BRF1-203ENST00000379937 SETD4Q9NVD3 440 aa16.66■□□□□ 0.26
BRF1-203ENST00000379937 ARFGEF1Q9Y6D6 1849 aa16.66■□□□□ 0.26
BRF1-203ENST00000379937 DYNC1LI2O43237 492 aaPredicted RBP16.66■□□□□ 0.26
BRF1-203ENST00000379937 IQCF3P0C7M6 154 aa16.66■□□□□ 0.26
BRF1-203ENST00000379937 SFNP31947 248 aa16.66■□□□□ 0.26
BRF1-203ENST00000379937 TAS2R40P59535 323 aa16.66■□□□□ 0.26
BRF1-203ENST00000379937 IFI35P80217 286 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms