RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 PTPAQ15257 358 aa26.96■■□□□ 1.91
TNFRSF4-201ENST00000379236 SPECC1Q5M775 1068 aa26.96■■□□□ 1.91
TNFRSF4-201ENST00000379236 CYP26C1Q6V0L0 522 aa26.96■■□□□ 1.91
TNFRSF4-201ENST00000379236 OTOP3Q7RTS5 596 aa26.96■■□□□ 1.91
TNFRSF4-201ENST00000379236 DDX27Q96GQ7 796 aaKnown RBP26.96■■□□□ 1.91
TNFRSF4-201ENST00000379236 EPSTI1Q96J88 318 aa26.96■■□□□ 1.91
TNFRSF4-201ENST00000379236 MFSD14AQ96MC6 490 aa26.96■■□□□ 1.91
TNFRSF4-201ENST00000379236 MTMR6Q9Y217 621 aa26.96■■□□□ 1.91
TNFRSF4-201ENST00000379236 SRPRBQ9Y5M8 271 aaKnown RBP26.96■■□□□ 1.91
TNFRSF4-201ENST00000379236 TMEM221A6NGB7 291 aa26.95■■□□□ 1.9
TNFRSF4-201ENST00000379236 M0R296 226 aa26.95■■□□□ 1.9
TNFRSF4-201ENST00000379236 TRAK2O60296 914 aa26.95■■□□□ 1.9
TNFRSF4-201ENST00000379236 ABCD1P33897 745 aa26.95■■□□□ 1.9
TNFRSF4-201ENST00000379236 UPP1Q16831 310 aa26.95■■□□□ 1.9
TNFRSF4-201ENST00000379236 LIN9Q5TKA1 542 aa26.95■■□□□ 1.9
TNFRSF4-201ENST00000379236 KRI1Q8N9T8 703 aaKnown RBP26.95■■□□□ 1.9
TNFRSF4-201ENST00000379236 KREMEN2Q8NCW0 462 aa26.95■■□□□ 1.9
TNFRSF4-201ENST00000379236 SMG7Q92540 1137 aaKnown RBP26.95■■□□□ 1.9
TNFRSF4-201ENST00000379236 STAMQ92783 540 aa26.95■■□□□ 1.9
TNFRSF4-201ENST00000379236 STK17AQ9UEE5 414 aa26.95■■□□□ 1.9
TNFRSF4-201ENST00000379236 FBXO2Q9UK22 296 aaPredicted RBP26.95■■□□□ 1.9
TNFRSF4-201ENST00000379236 TECTAO75443 2155 aa26.95■■□□□ 1.9
TNFRSF4-201ENST00000379236 ABLIM1O14639 778 aa26.94■■□□□ 1.9
TNFRSF4-201ENST00000379236 HNRNPDLO14979 420 aaKnown RBP26.94■■□□□ 1.9
TNFRSF4-201ENST00000379236 KCNE1P15382 129 aa26.94■■□□□ 1.9
TNFRSF4-201ENST00000379236 DDIT3P35638 169 aa26.94■■□□□ 1.9
TNFRSF4-201ENST00000379236 SIGLEC14Q08ET2 396 aa26.94■■□□□ 1.9
TNFRSF4-201ENST00000379236 MTMR3Q13615 1198 aa26.94■■□□□ 1.9
TNFRSF4-201ENST00000379236 XKR4Q5GH76 650 aa26.94■■□□□ 1.9
TNFRSF4-201ENST00000379236 ALKAL1Q6UXT8 129 aa26.94■■□□□ 1.9
TNFRSF4-201ENST00000379236 HFE2Q6ZVN8 426 aa26.94■■□□□ 1.9
TNFRSF4-201ENST00000379236 ZDHHC14Q8IZN3 488 aa26.94■■□□□ 1.9
TNFRSF4-201ENST00000379236 LNX1Q8TBB1 728 aaPredicted RBP26.94■■□□□ 1.9
TNFRSF4-201ENST00000379236 ZDHHC7Q9NXF8 308 aa26.94■■□□□ 1.9
TNFRSF4-201ENST00000379236 CNTN3Q9P232 1028 aa26.94■■□□□ 1.9
TNFRSF4-201ENST00000379236 PODXLO00592 558 aa26.93■■□□□ 1.9
TNFRSF4-201ENST00000379236 RFPL2O75678 378 aa26.93■■□□□ 1.9
TNFRSF4-201ENST00000379236 MCL1Q07820 350 aa26.93■■□□□ 1.9
TNFRSF4-201ENST00000379236 SEZ6Q53EL9 994 aa26.93■■□□□ 1.9
TNFRSF4-201ENST00000379236 RRAGBQ5VZM2 374 aa26.93■■□□□ 1.9
TNFRSF4-201ENST00000379236 LRRC15Q8TF66 581 aa26.93■■□□□ 1.9
TNFRSF4-201ENST00000379236 SNX21Q969T3 373 aa26.93■■□□□ 1.9
TNFRSF4-201ENST00000379236 PBXIP1Q96AQ6 731 aa26.93■■□□□ 1.9
TNFRSF4-201ENST00000379236 FAM122AQ96E09 287 aa26.93■■□□□ 1.9
TNFRSF4-201ENST00000379236 TBX20Q9UMR3 447 aa26.93■■□□□ 1.9
TNFRSF4-201ENST00000379236 SORCS3Q9UPU3 1222 aa26.93■■□□□ 1.9
TNFRSF4-201ENST00000379236 NUB1Q9Y5A7 615 aa26.93■■□□□ 1.9
TNFRSF4-201ENST00000379236 ZNF131P52739 623 aa26.92■■□□□ 1.9
TNFRSF4-201ENST00000379236 KYAT1Q16773 422 aa26.92■■□□□ 1.9
TNFRSF4-201ENST00000379236 SUGP1Q8IWZ8 645 aaKnown RBP26.92■■□□□ 1.9
TNFRSF4-201ENST00000379236 CLIC6Q96NY7 704 aa26.92■■□□□ 1.9
TNFRSF4-201ENST00000379236 USP28Q96RU2 1077 aa26.92■■□□□ 1.9
TNFRSF4-201ENST00000379236 CLTAP09496 248 aa26.91■■□□□ 1.9
TNFRSF4-201ENST00000379236 FGFR3P22607 806 aa26.91■■□□□ 1.9
TNFRSF4-201ENST00000379236 SOX4Q06945 474 aaPredicted RBP26.91■■□□□ 1.9
TNFRSF4-201ENST00000379236 STK38Q15208 465 aa26.91■■□□□ 1.9
TNFRSF4-201ENST00000379236 USP49Q70CQ1 688 aa26.91■■□□□ 1.9
TNFRSF4-201ENST00000379236 UBALD2Q8IYN6 164 aa26.91■■□□□ 1.9
TNFRSF4-201ENST00000379236 FEZF2Q8TBJ5 459 aa26.91■■□□□ 1.9
TNFRSF4-201ENST00000379236 ZMAT2Q96NC0 199 aaKnown RBP26.91■■□□□ 1.9
TNFRSF4-201ENST00000379236 CLSTN3Q9BQT9 956 aa26.91■■□□□ 1.9
TNFRSF4-201ENST00000379236 LIMD1Q9UGP4 676 aa26.91■■□□□ 1.9
TNFRSF4-201ENST00000379236 ARIH1Q9Y4X5 557 aaPredicted RBP26.91■■□□□ 1.9
TNFRSF4-201ENST00000379236 CLUHO75153 1309 aa26.9■■□□□ 1.9
TNFRSF4-201ENST00000379236 CXCL8P10145 99 aa26.9■■□□□ 1.9
TNFRSF4-201ENST00000379236 TKTP29401 623 aaKnown RBP26.9■■□□□ 1.9
TNFRSF4-201ENST00000379236 GBP2P32456 591 aaPredicted RBP26.9■■□□□ 1.9
TNFRSF4-201ENST00000379236 RPL9P32969 192 aaKnown RBP26.9■■□□□ 1.9
TNFRSF4-201ENST00000379236 BRCC3P46736 316 aa26.9■■□□□ 1.9
TNFRSF4-201ENST00000379236 PPP2R3AQ06190 1150 aa26.9■■□□□ 1.9
TNFRSF4-201ENST00000379236 LILRA6Q6PI73 481 aa26.9■■□□□ 1.9
TNFRSF4-201ENST00000379236 CCDC73Q6ZRK6 1079 aa26.9■■□□□ 1.9
TNFRSF4-201ENST00000379236 ANKS3Q6ZW76 656 aa26.9■■□□□ 1.9
TNFRSF4-201ENST00000379236 SV2BQ7L1I2 683 aa26.9■■□□□ 1.9
TNFRSF4-201ENST00000379236 DYMQ7RTS9 669 aa26.9■■□□□ 1.9
TNFRSF4-201ENST00000379236 ZNF396Q96N95 335 aaPredicted RBP26.9■■□□□ 1.9
TNFRSF4-201ENST00000379236 RHOBTB2Q9BYZ6 727 aa26.9■■□□□ 1.9
TNFRSF4-201ENST00000379236 WDR6Q9NNW5 1121 aaKnown RBP26.9■■□□□ 1.9
TNFRSF4-201ENST00000379236 FBXW11Q9UKB1 542 aa26.9■■□□□ 1.9
TNFRSF4-201ENST00000379236 I3L4J1 428 aa26.89■■□□□ 1.9
TNFRSF4-201ENST00000379236 ZMYND10O75800 440 aa26.89■■□□□ 1.9
TNFRSF4-201ENST00000379236 ASGR2P07307 311 aa26.89■■□□□ 1.9
TNFRSF4-201ENST00000379236 STAT6P42226 847 aa26.89■■□□□ 1.9
TNFRSF4-201ENST00000379236 SLC39A14Q15043 492 aa26.89■■□□□ 1.9
TNFRSF4-201ENST00000379236 SLC10A6Q3KNW5 377 aa26.89■■□□□ 1.9
TNFRSF4-201ENST00000379236 PPM1LQ5SGD2 360 aa26.89■■□□□ 1.9
TNFRSF4-201ENST00000379236 BMP8AQ7Z5Y6 402 aa26.89■■□□□ 1.9
TNFRSF4-201ENST00000379236 C3orf58Q8NDZ4 430 aa26.89■■□□□ 1.9
TNFRSF4-201ENST00000379236 KCNN1Q92952 543 aa26.89■■□□□ 1.9
TNFRSF4-201ENST00000379236 C18orf25Q96B23 403 aaPredicted RBP26.89■■□□□ 1.9
TNFRSF4-201ENST00000379236 PRKD2Q9BZL6 878 aa26.89■■□□□ 1.9
TNFRSF4-201ENST00000379236 PLEKHA5Q9HAU0 1116 aa26.89■■□□□ 1.9
TNFRSF4-201ENST00000379236 MTRRQ9UBK8 725 aa26.89■■□□□ 1.9
TNFRSF4-201ENST00000379236 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.89■■□□□ 1.9
TNFRSF4-201ENST00000379236 XPOTO43592 962 aaKnown RBP26.88■■□□□ 1.89
TNFRSF4-201ENST00000379236 NMT1P30419 496 aaKnown RBP26.88■■□□□ 1.89
TNFRSF4-201ENST00000379236 MCM4P33991 863 aa26.88■■□□□ 1.89
TNFRSF4-201ENST00000379236 OR1D2P34982 312 aa26.88■■□□□ 1.89
TNFRSF4-201ENST00000379236 KIF12Q96FN5 646 aa26.88■■□□□ 1.89
TNFRSF4-201ENST00000379236 MSTO1Q9BUK6 570 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms