RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 C3orf70A6NLC5 250 aaPredicted RBP11.54□□□□□ -0.56
LINC00654-201ENST00000379053 CD2BP2O95400 341 aaKnown RBP11.54□□□□□ -0.56
LINC00654-201ENST00000379053 PDGFRAP16234 1089 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 FAM49BQ9NUQ9 324 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 APOBEC2Q9Y235 224 aaKnown RBP11.54□□□□□ -0.56
LINC00654-201ENST00000379053 DNAJC8O75937 253 aaPredicted RBP11.53□□□□□ -0.56
LINC00654-201ENST00000379053 IL18RAPO95256 599 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 GCLCP48506 637 aaPredicted RBP11.53□□□□□ -0.56
LINC00654-201ENST00000379053 NNTQ13423 1086 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 CHSY1Q86X52 802 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 TRIM55Q9BYV6 548 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 USP42Q9H9J4 1324 aaKnown RBP11.53□□□□□ -0.56
LINC00654-201ENST00000379053 RFX7Q2KHR2 1363 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 PRR23AA6NEV1 266 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 MAFGO15525 162 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 TBC1D1Q86TI0 1168 aaPredicted RBP11.53□□□□□ -0.56
LINC00654-201ENST00000379053 FHDC1Q9C0D6 1143 aaPredicted RBP11.53□□□□□ -0.56
LINC00654-201ENST00000379053 STARD7Q9NQZ5 370 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 ABI2Q9NYB9 513 aaPredicted RBP11.53□□□□□ -0.56
LINC00654-201ENST00000379053 NFU1Q9UMS0 254 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 CNTNAP4Q9C0A0 1308 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 A0A0G2JND7 137 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 RALBP11234 206 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 CAV1Q03135 178 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 PDIA5Q14554 519 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 PTPAQ15257 358 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 SBK1Q52WX2 424 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 SGMS1Q86VZ5 419 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 DDIASQ8IXT1 998 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 KDM4CQ9H3R0 1056 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 LATS2Q9NRM7 1088 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.53□□□□□ -0.56
LINC00654-201ENST00000379053 PPARGC1AQ9UBK2 798 aaKnown RBP11.53□□□□□ -0.56
LINC00654-201ENST00000379053 CPA4Q9UI42 421 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 CARNS1A5YM72 827 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 RASA4BC9J798 803 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 PDXKO00764 312 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 RASA4O43374 803 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 NTSR2O95665 410 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 SLC8A1P32418 973 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 TCF7P36402 384 aaPredicted RBP11.53□□□□□ -0.56
LINC00654-201ENST00000379053 PRKCQQ04759 706 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 SPARCL1Q14515 664 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 C16orf86Q6ZW13 317 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 SPDYE5A6NIY4 337 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 GPR182O15218 404 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 RPLP2P05387 115 aaKnown RBP11.53□□□□□ -0.56
LINC00654-201ENST00000379053 ESRRGP62508 458 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 SPDYE7PQ495Y7 208 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 FSCBQ5H9T9 825 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 TDRD10Q5VZ19 366 aaKnown RBP11.53□□□□□ -0.56
LINC00654-201ENST00000379053 KLHL29Q96CT2 875 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 ASPSCR1Q9BZE9 553 aa11.53□□□□□ -0.56
LINC00654-201ENST00000379053 TMEM88BA6NKF7 163 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 HOXA2O43364 376 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 MRPS25P82663 173 aaKnown RBP11.52□□□□□ -0.56
LINC00654-201ENST00000379053 ATG9AQ7Z3C6 839 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 OOSP2Q86WS3 158 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 UCMAQ8WVF2 138 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 BHMTQ93088 406 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 BTBD6Q96KE9 485 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 AGAP3Q96P47 875 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 RNF208Q9H0X6 261 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 TXLNGQ9NUQ3 528 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 FGFR1OP2Q9NVK5 253 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 ZW10O43264 779 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 KRT14P02533 472 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 DEUP1Q05D60 604 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 PDIA2Q13087 525 aaKnown RBP11.52□□□□□ -0.56
LINC00654-201ENST00000379053 FAM133BQ5BKY9 247 aaKnown RBP11.52□□□□□ -0.56
LINC00654-201ENST00000379053 FRMD5Q7Z6J6 570 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 TRIM48Q8IWZ4 208 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 SEPT8Q92599 483 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 OTUB1Q96FW1 271 aaPredicted RBP11.52□□□□□ -0.56
LINC00654-201ENST00000379053 MXRA8Q9BRK3 442 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 NT5C1AQ9BXI3 368 aa11.52□□□□□ -0.56
LINC00654-201ENST00000379053 CCDC195A0A1B0GUA6 201 aa11.52□□□□□ -0.57
LINC00654-201ENST00000379053 CFAP99D6REC4 459 aa11.52□□□□□ -0.57
LINC00654-201ENST00000379053 SEC31AO94979 1220 aaKnown RBP11.52□□□□□ -0.57
LINC00654-201ENST00000379053 GFAPP14136 432 aa11.52□□□□□ -0.57
LINC00654-201ENST00000379053 TYK2P29597 1187 aa11.52□□□□□ -0.57
LINC00654-201ENST00000379053 WDR48Q8TAF3 677 aa11.52□□□□□ -0.57
LINC00654-201ENST00000379053 ATXN7L3BQ96GX2 97 aa11.52□□□□□ -0.57
LINC00654-201ENST00000379053 SPATS2LQ9NUQ6 558 aaKnown RBP11.52□□□□□ -0.57
LINC00654-201ENST00000379053 TPX2Q9ULW0 747 aaKnown RBP11.52□□□□□ -0.57
LINC00654-201ENST00000379053 CYP2C19P33261 490 aa11.52□□□□□ -0.57
LINC00654-201ENST00000379053 CDH18Q13634 790 aa11.52□□□□□ -0.57
LINC00654-201ENST00000379053 TMEM259Q4ZIN3 620 aa11.52□□□□□ -0.57
LINC00654-201ENST00000379053 XRRA1Q6P2D8 792 aa11.52□□□□□ -0.57
LINC00654-201ENST00000379053 SELENONQ9NZV5 590 aa11.52□□□□□ -0.57
LINC00654-201ENST00000379053 WDR35Q9P2L0 1181 aa11.52□□□□□ -0.57
LINC00654-201ENST00000379053 TTLL13PA6NNM8 815 aa11.52□□□□□ -0.57
LINC00654-201ENST00000379053 EEF2KO00418 725 aaKnown RBP11.52□□□□□ -0.57
LINC00654-201ENST00000379053 PRR29P0C7W0 189 aa11.52□□□□□ -0.57
LINC00654-201ENST00000379053 SESN2P58004 480 aaPredicted RBP11.52□□□□□ -0.57
LINC00654-201ENST00000379053 ATP2C1P98194 919 aaPredicted RBP11.52□□□□□ -0.57
LINC00654-201ENST00000379053 RASIP1Q5U651 963 aa11.52□□□□□ -0.57
LINC00654-201ENST00000379053 IRAK1BP1Q5VVH5 260 aa11.52□□□□□ -0.57
LINC00654-201ENST00000379053 COL23A1Q86Y22 540 aaPredicted RBP11.52□□□□□ -0.57
LINC00654-201ENST00000379053 ZBED8Q8IZ13 594 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms