RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 CXCL8P10145 99 aa16.81■□□□□ 0.28
RAB4B-202ENST00000378307 KCNE1P15382 129 aa16.81■□□□□ 0.28
RAB4B-202ENST00000378307 BRCC3P46736 316 aa16.81■□□□□ 0.28
RAB4B-202ENST00000378307 LIG4P49917 911 aa16.81■□□□□ 0.28
RAB4B-202ENST00000378307 SPAG1Q07617 926 aa16.81■□□□□ 0.28
RAB4B-202ENST00000378307 KCNA1Q09470 495 aa16.81■□□□□ 0.28
RAB4B-202ENST00000378307 CBX2Q14781 532 aaPredicted RBP16.81■□□□□ 0.28
RAB4B-202ENST00000378307 FAM171A1Q5VUB5 890 aa16.81■□□□□ 0.28
RAB4B-202ENST00000378307 KIAA1841Q6NSI8 718 aa16.81■□□□□ 0.28
RAB4B-202ENST00000378307 TMC5Q6UXY8 1006 aa16.81■□□□□ 0.28
RAB4B-202ENST00000378307 SPATA31D4Q6ZUB0 917 aa16.81■□□□□ 0.28
RAB4B-202ENST00000378307 ZNF720Q7Z2F6 126 aa16.81■□□□□ 0.28
RAB4B-202ENST00000378307 MAP4K3Q8IVH8 894 aa16.81■□□□□ 0.28
RAB4B-202ENST00000378307 GLYCTKQ8IVS8 523 aa16.81■□□□□ 0.28
RAB4B-202ENST00000378307 LNX1Q8TBB1 728 aaPredicted RBP16.81■□□□□ 0.28
RAB4B-202ENST00000378307 PHF7Q9BWX1 381 aaPredicted RBP16.81■□□□□ 0.28
RAB4B-202ENST00000378307 ST6GALNAC4Q9H4F1 302 aa16.81■□□□□ 0.28
RAB4B-202ENST00000378307 TOPORSQ9NS56 1045 aaPredicted RBP16.81■□□□□ 0.28
RAB4B-202ENST00000378307 PCDHA7Q9UN72 937 aa16.81■□□□□ 0.28
RAB4B-202ENST00000378307 TCHHQ07283 1943 aa16.8■□□□□ 0.28
RAB4B-202ENST00000378307 ANK1P16157 1881 aa16.8■□□□□ 0.28
RAB4B-202ENST00000378307 SF3B1O75533 1304 aaKnown RBP eCLIP16.8■□□□□ 0.28
RAB4B-202ENST00000378307 PI4K2BG5E9Z4 385 aa16.8■□□□□ 0.28
RAB4B-202ENST00000378307 TMEM189-UBE2V1I3L0A0 370 aa16.8■□□□□ 0.28
RAB4B-202ENST00000378307 I3L4J1 428 aa16.8■□□□□ 0.28
RAB4B-202ENST00000378307 HNRNPDLO14979 420 aaKnown RBP16.8■□□□□ 0.28
RAB4B-202ENST00000378307 ADAM12O43184 909 aa16.8■□□□□ 0.28
RAB4B-202ENST00000378307 PPP1R37O75864 691 aa16.8■□□□□ 0.28
RAB4B-202ENST00000378307 B3GAT3O94766 335 aa16.8■□□□□ 0.28
RAB4B-202ENST00000378307 PDIA4P13667 645 aaKnown RBP16.8■□□□□ 0.28
RAB4B-202ENST00000378307 SP100P23497 879 aaPredicted RBP16.8■□□□□ 0.28
RAB4B-202ENST00000378307 MATR3P43243 847 aaKnown RBP eCLIP16.8■□□□□ 0.28
RAB4B-202ENST00000378307 CASP5P51878 434 aa16.8■□□□□ 0.28
RAB4B-202ENST00000378307 TPRNQ4KMQ1 711 aa16.8■□□□□ 0.28
RAB4B-202ENST00000378307 DCLRE1AQ6PJP8 1040 aa16.8■□□□□ 0.28
RAB4B-202ENST00000378307 PPFIBP1Q86W92 1011 aa16.8■□□□□ 0.28
RAB4B-202ENST00000378307 PALB2Q86YC2 1186 aa16.8■□□□□ 0.28
RAB4B-202ENST00000378307 RPGRIP1Q96KN7 1286 aa16.8■□□□□ 0.28
RAB4B-202ENST00000378307 CLSTN3Q9BQT9 956 aa16.8■□□□□ 0.28
RAB4B-202ENST00000378307 POMKQ9H5K3 350 aa16.8■□□□□ 0.28
RAB4B-202ENST00000378307 C11orf16Q9NQ32 467 aa16.8■□□□□ 0.28
RAB4B-202ENST00000378307 SSX2IPQ9Y2D8 614 aa16.8■□□□□ 0.28
RAB4B-202ENST00000378307 MYO10Q9HD67 2058 aa16.79■□□□□ 0.28
RAB4B-202ENST00000378307 DOCK6Q96HP0 2047 aa16.79■□□□□ 0.28
RAB4B-202ENST00000378307 A0A0B4J269 797 aa16.79■□□□□ 0.28
RAB4B-202ENST00000378307 TTC26A0AVF1 554 aa16.79■□□□□ 0.28
RAB4B-202ENST00000378307 FRMD3A2A2Y4 597 aa16.79■□□□□ 0.28
RAB4B-202ENST00000378307 ITIH3Q06033 890 aa16.79■□□□□ 0.28
RAB4B-202ENST00000378307 CEP57Q86XR8 500 aa16.79■□□□□ 0.28
RAB4B-202ENST00000378307 RNF135Q8IUD6 432 aa16.79■□□□□ 0.28
RAB4B-202ENST00000378307 TTPALQ9BTX7 342 aa16.79■□□□□ 0.28
RAB4B-202ENST00000378307 MAN1C1Q9NR34 630 aa16.79■□□□□ 0.28
RAB4B-202ENST00000378307 DZANK1Q9NVP4 752 aa16.79■□□□□ 0.28
RAB4B-202ENST00000378307 FNIP2Q9P278 1114 aa16.79■□□□□ 0.28
RAB4B-202ENST00000378307 TUBGCP4Q9UGJ1 667 aa16.79■□□□□ 0.28
RAB4B-202ENST00000378307 RCOR1Q9UKL0 485 aa16.79■□□□□ 0.28
RAB4B-202ENST00000378307 LACTBL1A8MY62 500 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 PODXLO00592 558 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 OGTO15294 1046 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 TGM5O43548 720 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 RFPL2O75678 378 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 ADH1AP07327 375 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 CLTAP09496 248 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 IDEP14735 1019 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 ADSSP30520 456 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 ZBTB6Q15916 424 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 ENOX2Q16206 610 aaKnown RBP16.78■□□□□ 0.28
RAB4B-202ENST00000378307 LILRA6Q6PI73 481 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 RSPO2Q6UXX9 243 aaPredicted RBP16.78■□□□□ 0.28
RAB4B-202ENST00000378307 GPR65Q8IYL9 337 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 GLIS3Q8NEA6 775 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 ZSWIM2Q8NEG5 633 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 PIK3R5Q8WYR1 880 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 HPS3Q969F9 1004 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 DHX58Q96C10 678 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 UROC1Q96N76 676 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 POP1Q99575 1024 aaKnown RBP16.78■□□□□ 0.28
RAB4B-202ENST00000378307 MSTO1Q9BUK6 570 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 MRPL44Q9H9J2 332 aaKnown RBP16.78■□□□□ 0.28
RAB4B-202ENST00000378307 KBTBD4Q9NVX7 518 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 MUTYHQ9UIF7 546 aa16.78■□□□□ 0.28
RAB4B-202ENST00000378307 FAM86C2PA6NEL3 165 aa16.77■□□□□ 0.28
RAB4B-202ENST00000378307 GAP43P17677 238 aa16.77■□□□□ 0.28
RAB4B-202ENST00000378307 SCP2P22307 547 aa16.77■□□□□ 0.28
RAB4B-202ENST00000378307 FGFR3P22607 806 aa16.77■□□□□ 0.28
RAB4B-202ENST00000378307 TKTP29401 623 aaKnown RBP16.77■□□□□ 0.28
RAB4B-202ENST00000378307 CASP1P29466 404 aa16.77■□□□□ 0.28
RAB4B-202ENST00000378307 GUCY2FP51841 1108 aa16.77■□□□□ 0.28
RAB4B-202ENST00000378307 PSMD5Q16401 504 aa16.77■□□□□ 0.28
RAB4B-202ENST00000378307 HERC4Q5GLZ8 1057 aaPredicted RBP16.77■□□□□ 0.28
RAB4B-202ENST00000378307 CES5AQ6NT32 575 aa16.77■□□□□ 0.28
RAB4B-202ENST00000378307 GPR149Q86SP6 731 aa16.77■□□□□ 0.28
RAB4B-202ENST00000378307 KCNG4Q8TDN1 519 aa16.77■□□□□ 0.28
RAB4B-202ENST00000378307 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.77■□□□□ 0.28
RAB4B-202ENST00000378307 SLC38A7Q9NVC3 462 aa16.77■□□□□ 0.28
RAB4B-202ENST00000378307 PANK4Q9NVE7 773 aa16.77■□□□□ 0.28
RAB4B-202ENST00000378307 SEL1LQ9UBV2 794 aa16.77■□□□□ 0.28
RAB4B-202ENST00000378307 CPSF3Q9UKF6 684 aaKnown RBP16.77■□□□□ 0.28
RAB4B-202ENST00000378307 STYXL1Q9Y6J8 313 aa16.77■□□□□ 0.28
RAB4B-202ENST00000378307 DENND4AQ7Z401 1863 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms