RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CFAP99D6REC4 459 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 TNFAIP8O95379 198 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 GSSP48637 474 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 INHBCP55103 352 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 TRAF7Q6Q0C0 670 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-202ENST00000378161 EXOC3L1Q86VI1 746 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 HEATR4Q86WZ0 1026 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 SMYD4Q8IYR2 804 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-202ENST00000378161 ST13P5Q8NFI4 369 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-202ENST00000378161 SH3TC2Q8TF17 1288 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 DIS3LQ8TF46 1054 aaKnown RBP12.43□□□□□ -0.42
NPHP4-202ENST00000378161 NRBF2Q96F24 287 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 DCUN1D5Q9BTE7 237 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 LRMDAQ9H2I8 198 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 SNX25Q9H3E2 840 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 ARPP21Q9UBL0 812 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-202ENST00000378161 CD163L1Q9NR16 1453 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 PALLDQ8WX93 1383 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 NPHP3-ACAD11A0A0J9YXS1 232 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 ZSCAN5CA6NGD5 496 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-202ENST00000378161 KLHL41O60662 606 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 KCNMA1Q12791 1236 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 PTPROQ16827 1216 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 ZNF423Q2M1K9 1284 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 CTC1Q2NKJ3 1217 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 COBLL1Q53SF7 1204 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 PALB2Q86YC2 1186 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 RNF38Q9H0F5 515 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 SLITRK6Q9H5Y7 841 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 AMFRQ9UKV5 643 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 SETD1BQ9UPS6 1966 aaKnown RBP12.42□□□□□ -0.42
NPHP4-202ENST00000378161 ASNA1O43681 348 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 COBLO75128 1261 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 FARP2O94887 1054 aaPredicted RBP12.42□□□□□ -0.42
NPHP4-202ENST00000378161 KLHL35Q6PF15 583 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 CCDC81Q6ZN84 652 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 CREG2Q8IUH2 290 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 SRRM1Q8IYB3 904 aaKnown RBP12.42□□□□□ -0.42
NPHP4-202ENST00000378161 MRRFQ96E11 262 aaKnown RBP12.42□□□□□ -0.42
NPHP4-202ENST00000378161 NOL6Q9H6R4 1146 aaKnown RBP12.42□□□□□ -0.42
NPHP4-202ENST00000378161 SLC12A6Q9UHW9 1150 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 LMTK3Q96Q04 1460 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 TMCC2O75069 709 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 PALMO75781 387 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 CPA3P15088 417 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 HMGB2P26583 209 aaKnown RBP12.42□□□□□ -0.42
NPHP4-202ENST00000378161 SLC1A1P43005 524 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 BCAMP50895 628 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 ASIC2Q16515 512 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 SEL1L2Q5TEA6 688 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 MCF2L2Q86YR7 1114 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 RHOT2Q8IXI1 618 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 TUBGCP2Q9BSJ2 902 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 MRPL9Q9BYD2 267 aaKnown RBP12.42□□□□□ -0.42
NPHP4-202ENST00000378161 MYLK2Q9H1R3 596 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 DHX36Q9H2U1 1008 aaKnown RBP12.42□□□□□ -0.42
NPHP4-202ENST00000378161 MAGEF1Q9HAY2 307 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 UVRAGQ9P2Y5 699 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 RWDD2AQ9UIY3 292 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 MKL2Q9ULH7 1088 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 PPLO60437 1756 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 USP11P51784 963 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 KLHL30Q0D2K2 578 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 ITGADQ13349 1161 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 ARL13BQ3SXY8 428 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 FAM47AQ5JRC9 791 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 ZNF658Q5TYW1 1059 aaPredicted RBP12.42□□□□□ -0.42
NPHP4-202ENST00000378161 AGAP9Q5VTM2 703 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 GPR141Q7Z602 305 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 ACAP3Q96P50 834 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 DTNAQ9Y4J8 743 aa12.42□□□□□ -0.42
NPHP4-202ENST00000378161 TSPAN1O60635 241 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 BCAP31P51572 246 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 PDK3Q15120 406 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 UNC13DQ70J99 1090 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 PIGWQ7Z7B1 504 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 METTL16Q86W50 562 aaKnown RBP12.41□□□□□ -0.42
NPHP4-202ENST00000378161 BRSK2Q8IWQ3 736 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 SUPT20HQ8NEM7 779 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 STRBPQ96SI9 672 aaKnown RBP12.41□□□□□ -0.42
NPHP4-202ENST00000378161 OSBPL6Q9BZF3 934 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 CYLDQ9NQC7 956 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 CCDC177Q9NQR7 707 aaPredicted RBP12.41□□□□□ -0.42
NPHP4-202ENST00000378161 DBR1Q9UK59 544 aaKnown RBP12.41□□□□□ -0.42
NPHP4-202ENST00000378161 TTLL3Q9Y4R7 772 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 UMODL1Q5DID0 1318 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 ZNF609O15014 1411 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 PABPN1LA6NDY0 278 aaKnown RBP12.41□□□□□ -0.42
NPHP4-202ENST00000378161 FKBP6O75344 327 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 SEMA3DO95025 777 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 MFN2O95140 757 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 CA4P22748 312 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 CIITAP33076 1130 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 NR1H2P55055 460 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 DEPDC1Q5TB30 811 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 ACAD11Q709F0 780 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 EPM2AIP1Q7L775 607 aaPredicted RBP12.41□□□□□ -0.42
NPHP4-202ENST00000378161 DYMQ7RTS9 669 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 FAM9CQ8IZT9 166 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms