RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 CYP2C9P11712 490 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 COMTP21964 271 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 ACTN2P35609 894 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 ZNF667Q5HYK9 610 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 DNAJC24Q6P3W2 148 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 ANKRD36BP1Q96IX9 119 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 ERGIC2Q96RQ1 377 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 AGPAT1Q99943 283 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 MAK16Q9BXY0 300 aaKnown RBP8.67□□□□□ -1.02
CKAP2-203ENST00000378037 MYH6P13533 1939 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 PAPPA2Q9BXP8 1791 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 BNIP3LO60238 219 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 MOCS2O96007 188 aaPredicted RBP8.66□□□□□ -1.02
CKAP2-203ENST00000378037 KRT1P04264 644 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 RNASELQ05823 741 aaKnown RBP8.66□□□□□ -1.02
CKAP2-203ENST00000378037 LAMTOR4Q0VGL1 99 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 NME3Q13232 169 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 LRRC14Q15048 493 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 PPP2R5AQ15172 486 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 ATF7IP2Q5U623 682 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 FRMD5Q7Z6J6 570 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 ADAM32Q8TC27 787 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 PNMA3Q9UL41 463 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 ALG6Q9Y672 507 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 ECM29Q5VYK3 1845 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 GVINP1Q7Z2Y8 2422 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 SOWAHBA6NEL2 793 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 M0QZ92 97 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 C2CD2LO14523 706 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 SART1O43290 800 aaKnown RBP8.66□□□□□ -1.02
CKAP2-203ENST00000378037 RNF40O75150 1001 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 GLRA2P23416 452 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 HOXD13P35453 343 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 BASP1P80723 227 aaKnown RBP8.66□□□□□ -1.02
CKAP2-203ENST00000378037 PDCLQ13371 301 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 LIN9Q5TKA1 542 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 ACOT1Q86TX2 421 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 C12orf29Q8N999 325 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 RBBP8NLQ8NC74 664 aaPredicted RBP8.66□□□□□ -1.02
CKAP2-203ENST00000378037 STKLD1Q8NE28 680 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 L3MBTL3Q96JM7 780 aaPredicted RBP8.66□□□□□ -1.02
CKAP2-203ENST00000378037 TAF1DQ9H5J8 278 aaPredicted RBP8.66□□□□□ -1.02
CKAP2-203ENST00000378037 SNX12Q9UMY4 172 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 F8VZ95 297 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 PGRMC1O00264 195 aaKnown RBP8.66□□□□□ -1.02
CKAP2-203ENST00000378037 HCRTO43612 131 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 SASH3O75995 380 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 CST3P01034 146 aaPredicted RBP8.66□□□□□ -1.02
CKAP2-203ENST00000378037 CFHP08603 1231 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 GPAT2Q6NUI2 795 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 FASTKD5Q7L8L6 764 aaKnown RBP8.66□□□□□ -1.02
CKAP2-203ENST00000378037 ERICH1Q86X53 443 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 SCN4BQ8IWT1 228 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 OTUD6BQ8N6M0 293 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 CCNYQ8ND76 341 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 SCFD2Q8WU76 684 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 LPPQ93052 612 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 RNPC3Q96LT9 517 aaKnown RBP8.66□□□□□ -1.02
CKAP2-203ENST00000378037 RPS6KC1Q96S38 1066 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 MRPL4Q9BYD3 311 aaKnown RBP8.66□□□□□ -1.02
CKAP2-203ENST00000378037 SIK2Q9H0K1 926 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 SNTG2Q9NY99 539 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 MTUS1Q9ULD2 1270 aa8.66□□□□□ -1.02
CKAP2-203ENST00000378037 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.66□□□□□ -1.02
CKAP2-203ENST00000378037 LRRIQ3A6PVS8 624 aaPredicted RBP8.65□□□□□ -1.02
CKAP2-203ENST00000378037 FOXO6A8MYZ6 492 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 FZD9O00144 591 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 RAD51CO43502 376 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 STAM2O75886 525 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 VIMP08670 466 aaKnown RBP8.65□□□□□ -1.02
CKAP2-203ENST00000378037 GPC3P51654 580 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 TNFAIP2Q03169 654 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 FAM102AQ5T9C2 384 aaPredicted RBP8.65□□□□□ -1.02
CKAP2-203ENST00000378037 MCTP2Q6DN12 878 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 C1orf228Q6PIY5 440 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 PPP4R3CPQ6ZMV5 832 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 IFT20Q8IY31 132 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.65□□□□□ -1.02
CKAP2-203ENST00000378037 C18orf8Q96DM3 657 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 C9orf72Q96LT7 481 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 DNAJC7Q99615 494 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 ALG13Q9NP73 1137 aaKnown RBP8.65□□□□□ -1.02
CKAP2-203ENST00000378037 CASTOR2A6NHX0 329 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 RASSF10A6NK89 507 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 A8MXQ7 604 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 H7C0C1 242 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 POMCP01189 267 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 PSMA2P25787 234 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 ATP5OP48047 213 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 NOP9Q86U38 636 aaKnown RBP8.65□□□□□ -1.02
CKAP2-203ENST00000378037 CCDC63Q8NA47 563 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 NDRG1Q92597 394 aaKnown RBP8.65□□□□□ -1.02
CKAP2-203ENST00000378037 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.65□□□□□ -1.02
CKAP2-203ENST00000378037 RBPJLQ9UBG7 517 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 MAD1L1Q9Y6D9 718 aa8.65□□□□□ -1.02
CKAP2-203ENST00000378037 IGSF9BQ9UPX0 1349 aa8.65□□□□□ -1.03
CKAP2-203ENST00000378037 F5P12259 2224 aa8.65□□□□□ -1.03
CKAP2-203ENST00000378037 RGS20O76081 388 aa8.65□□□□□ -1.03
CKAP2-203ENST00000378037 NOL4O94818 638 aa8.65□□□□□ -1.03
CKAP2-203ENST00000378037 GLI1P08151 1106 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms