RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 TEPSINQ96N21 525 aa27.02■■□□□ 1.92
C9orf40-201ENST00000376854 TRIM7Q9C029 511 aa27.02■■□□□ 1.92
C9orf40-201ENST00000376854 AAASQ9NRG9 546 aa27.02■■□□□ 1.92
C9orf40-201ENST00000376854 CHST7Q9NS84 486 aa27.02■■□□□ 1.92
C9orf40-201ENST00000376854 GHRP10912 638 aa27.02■■□□□ 1.92
C9orf40-201ENST00000376854 ENOSF1Q7L5Y1 443 aa27.02■■□□□ 1.92
C9orf40-201ENST00000376854 PIGWQ7Z7B1 504 aa27.02■■□□□ 1.92
C9orf40-201ENST00000376854 MCOLN2Q8IZK6 566 aa27.02■■□□□ 1.92
C9orf40-201ENST00000376854 GPD1LQ8N335 351 aa27.02■■□□□ 1.92
C9orf40-201ENST00000376854 MOV10L1Q9BXT6 1211 aaKnown RBP27.02■■□□□ 1.92
C9orf40-201ENST00000376854 CTDP1Q9Y5B0 961 aaPredicted RBP27.02■■□□□ 1.92
C9orf40-201ENST00000376854 CCT8L1PA6NM43 557 aa27.01■■□□□ 1.91
C9orf40-201ENST00000376854 HNRNPDLO14979 420 aaKnown RBP27.01■■□□□ 1.91
C9orf40-201ENST00000376854 ACSL3O95573 720 aa27.01■■□□□ 1.91
C9orf40-201ENST00000376854 UNGP13051 313 aaPredicted RBP27.01■■□□□ 1.91
C9orf40-201ENST00000376854 ITIH2P19823 946 aa27.01■■□□□ 1.91
C9orf40-201ENST00000376854 CNGA2Q16280 664 aa27.01■■□□□ 1.91
C9orf40-201ENST00000376854 LONRF1Q17RB8 773 aa27.01■■□□□ 1.91
C9orf40-201ENST00000376854 SAMD3Q8N6K7 520 aa27.01■■□□□ 1.91
C9orf40-201ENST00000376854 ATG4AQ8WYN0 398 aa27.01■■□□□ 1.91
C9orf40-201ENST00000376854 HAUS2Q9NVX0 235 aa27.01■■□□□ 1.91
C9orf40-201ENST00000376854 IFNAR2P48551 515 aa27.01■■□□□ 1.91
C9orf40-201ENST00000376854 OTUD6AQ7L8S5 288 aa27.01■■□□□ 1.91
C9orf40-201ENST00000376854 EXOC3L1Q86VI1 746 aa27.01■■□□□ 1.91
C9orf40-201ENST00000376854 FAM84AQ96KN4 292 aa27.01■■□□□ 1.91
C9orf40-201ENST00000376854 FAM213AQ9BRX8 229 aa27.01■■□□□ 1.91
C9orf40-201ENST00000376854 MTFR1LQ9H019 292 aa27.01■■□□□ 1.91
C9orf40-201ENST00000376854 KIAA1683Q9H0B3 1180 aa27.01■■□□□ 1.91
C9orf40-201ENST00000376854 SAMD15Q9P1V8 674 aa27.01■■□□□ 1.91
C9orf40-201ENST00000376854 PCDHA10Q9Y5I2 948 aa27.01■■□□□ 1.91
C9orf40-201ENST00000376854 MROH7Q68CQ1 1323 aa27.01■■□□□ 1.91
C9orf40-201ENST00000376854 VIMP08670 466 aaKnown RBP27■■□□□ 1.91
C9orf40-201ENST00000376854 SF3A3Q12874 501 aaKnown RBP eCLIP27■■□□□ 1.91
C9orf40-201ENST00000376854 PHLDB2Q86SQ0 1253 aa27■■□□□ 1.91
C9orf40-201ENST00000376854 MAIP1Q8WWC4 291 aa27■■□□□ 1.91
C9orf40-201ENST00000376854 CPA5Q8WXQ8 436 aa27■■□□□ 1.91
C9orf40-201ENST00000376854 SNF8Q96H20 258 aa27■■□□□ 1.91
C9orf40-201ENST00000376854 C17orf75Q9HAS0 396 aa27■■□□□ 1.91
C9orf40-201ENST00000376854 C1orf112Q9NSG2 853 aa27■■□□□ 1.91
C9orf40-201ENST00000376854 ADGRA3Q8IWK6 1321 aa27■■□□□ 1.91
C9orf40-201ENST00000376854 RRM1P23921 792 aa27■■□□□ 1.91
C9orf40-201ENST00000376854 CHKAP35790 457 aa27■■□□□ 1.91
C9orf40-201ENST00000376854 ITIH4Q14624 930 aa27■■□□□ 1.91
C9orf40-201ENST00000376854 RHBDF2Q6PJF5 856 aa27■■□□□ 1.91
C9orf40-201ENST00000376854 NLRX1Q86UT6 975 aa27■■□□□ 1.91
C9orf40-201ENST00000376854 FUKQ8N0W3 1084 aa27■■□□□ 1.91
C9orf40-201ENST00000376854 RDM1Q8NG50 284 aa27■■□□□ 1.91
C9orf40-201ENST00000376854 FAM81BQ96LP2 452 aa27■■□□□ 1.91
C9orf40-201ENST00000376854 AVENQ9NQS1 362 aaPredicted RBP27■■□□□ 1.91
C9orf40-201ENST00000376854 GABBR1Q9UBS5 961 aa27■■□□□ 1.91
C9orf40-201ENST00000376854 FER1L6Q2WGJ9 1857 aa26.99■■□□□ 1.91
C9orf40-201ENST00000376854 ZC3H11AO75152 810 aaKnown RBP eCLIP26.99■■□□□ 1.91
C9orf40-201ENST00000376854 CIAPIN1Q6FI81 312 aa26.99■■□□□ 1.91
C9orf40-201ENST00000376854 SYDE1Q6ZW31 735 aaPredicted RBP26.99■■□□□ 1.91
C9orf40-201ENST00000376854 BICD1Q96G01 975 aa26.99■■□□□ 1.91
C9orf40-201ENST00000376854 ELAC2Q9BQ52 826 aaKnown RBP26.99■■□□□ 1.91
C9orf40-201ENST00000376854 MAN1A1P33908 653 aa26.99■■□□□ 1.91
C9orf40-201ENST00000376854 SLC1A1P43005 524 aa26.99■■□□□ 1.91
C9orf40-201ENST00000376854 PTK6Q13882 451 aa26.99■■□□□ 1.91
C9orf40-201ENST00000376854 CYB5D1Q6P9G0 228 aa26.99■■□□□ 1.91
C9orf40-201ENST00000376854 TAX1BP1Q86VP1 789 aa26.99■■□□□ 1.91
C9orf40-201ENST00000376854 WNK4Q96J92 1243 aa26.99■■□□□ 1.91
C9orf40-201ENST00000376854 HERPUD2Q9BSE4 406 aa26.99■■□□□ 1.91
C9orf40-201ENST00000376854 SBDSQ9Y3A5 250 aaKnown RBP eCLIP26.99■■□□□ 1.91
C9orf40-201ENST00000376854 MYPNQ86TC9 1320 aa26.98■■□□□ 1.91
C9orf40-201ENST00000376854 ZNF862O60290 1169 aa26.98■■□□□ 1.91
C9orf40-201ENST00000376854 MTMR2Q13614 643 aa26.98■■□□□ 1.91
C9orf40-201ENST00000376854 TRIP13Q15645 432 aaPredicted RBP26.98■■□□□ 1.91
C9orf40-201ENST00000376854 IPO4Q8TEX9 1081 aaKnown RBP26.98■■□□□ 1.91
C9orf40-201ENST00000376854 GRK7Q8WTQ7 553 aa26.98■■□□□ 1.91
C9orf40-201ENST00000376854 SERPINB12Q96P63 405 aa26.98■■□□□ 1.91
C9orf40-201ENST00000376854 HOMER3Q9NSC5 361 aa26.98■■□□□ 1.91
C9orf40-201ENST00000376854 PCDHB2Q9Y5E7 798 aa26.98■■□□□ 1.91
C9orf40-201ENST00000376854 GAS8O95995 478 aa26.98■■□□□ 1.91
C9orf40-201ENST00000376854 MYBL1P10243 752 aa26.98■■□□□ 1.91
C9orf40-201ENST00000376854 GARTP22102 1010 aa26.98■■□□□ 1.91
C9orf40-201ENST00000376854 IVDP26440 423 aa26.98■■□□□ 1.91
C9orf40-201ENST00000376854 BRDTQ58F21 947 aaPredicted RBP26.98■■□□□ 1.91
C9orf40-201ENST00000376854 TRIM11Q96F44 468 aa26.98■■□□□ 1.91
C9orf40-201ENST00000376854 DCLK3Q9C098 648 aa26.98■■□□□ 1.91
C9orf40-201ENST00000376854 NSRP1Q9H0G5 558 aaKnown RBP26.98■■□□□ 1.91
C9orf40-201ENST00000376854 ITGA8P53708 1063 aa26.97■■□□□ 1.91
C9orf40-201ENST00000376854 ZNF516Q92618 1163 aa26.97■■□□□ 1.91
C9orf40-201ENST00000376854 ARHGEF2Q92974 986 aaKnown RBP26.97■■□□□ 1.91
C9orf40-201ENST00000376854 CD248Q9HCU0 757 aa26.97■■□□□ 1.91
C9orf40-201ENST00000376854 ZNFX1Q9P2E3 1918 aaKnown RBP26.97■■□□□ 1.91
C9orf40-201ENST00000376854 ZBED4O75132 1171 aa26.96■■□□□ 1.91
C9orf40-201ENST00000376854 DNAJC8O75937 253 aaPredicted RBP26.96■■□□□ 1.91
C9orf40-201ENST00000376854 NSFP46459 744 aaKnown RBP26.96■■□□□ 1.91
C9orf40-201ENST00000376854 XRCC4Q13426 336 aa26.96■■□□□ 1.91
C9orf40-201ENST00000376854 C2CD6Q53TS8 623 aa26.96■■□□□ 1.91
C9orf40-201ENST00000376854 LLGL2Q6P1M3 1020 aa26.96■■□□□ 1.91
C9orf40-201ENST00000376854 ZNF677Q86XU0 584 aa26.96■■□□□ 1.91
C9orf40-201ENST00000376854 ATP6V0A1Q93050 837 aa26.96■■□□□ 1.91
C9orf40-201ENST00000376854 DDX27Q96GQ7 796 aaKnown RBP26.96■■□□□ 1.91
C9orf40-201ENST00000376854 SGSM3Q96HU1 749 aa26.96■■□□□ 1.91
C9orf40-201ENST00000376854 SENP7Q9BQF6 1050 aa26.96■■□□□ 1.91
C9orf40-201ENST00000376854 DNAJC17Q9NVM6 304 aaKnown RBP26.96■■□□□ 1.91
C9orf40-201ENST00000376854 CHUKO15111 745 aa26.96■■□□□ 1.91
C9orf40-201ENST00000376854 ATF2P15336 505 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms