RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 GRASPQ7Z6J2 395 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-204ENST00000376643 DTWD2Q8NBA8 298 aa16.17■□□□□ 0.18
HDAC6-204ENST00000376643 SLC7A14Q8TBB6 771 aa16.17■□□□□ 0.18
HDAC6-204ENST00000376643 SPIRE2Q8WWL2 714 aa16.17■□□□□ 0.18
HDAC6-204ENST00000376643 ACO2Q99798 780 aaKnown RBP16.17■□□□□ 0.18
HDAC6-204ENST00000376643 ARHGEF3Q9NR81 526 aa16.17■□□□□ 0.18
HDAC6-204ENST00000376643 POLIQ9UNA4 740 aa16.17■□□□□ 0.18
HDAC6-204ENST00000376643 PCDHB6Q9Y5E3 794 aa16.17■□□□□ 0.18
HDAC6-204ENST00000376643 MTCL1Q9Y4B5 1905 aaKnown RBP16.17■□□□□ 0.18
HDAC6-204ENST00000376643 SMIM28A0A1B0GU29 152 aa16.16■□□□□ 0.18
HDAC6-204ENST00000376643 H3BQV1 296 aa16.16■□□□□ 0.18
HDAC6-204ENST00000376643 NPR3P17342 541 aa16.16■□□□□ 0.18
HDAC6-204ENST00000376643 ABCD1P33897 745 aa16.16■□□□□ 0.18
HDAC6-204ENST00000376643 OR1D2P34982 312 aa16.16■□□□□ 0.18
HDAC6-204ENST00000376643 CLCNKBP51801 687 aa16.16■□□□□ 0.18
HDAC6-204ENST00000376643 ECM1Q16610 540 aa16.16■□□□□ 0.18
HDAC6-204ENST00000376643 KYAT1Q16773 422 aa16.16■□□□□ 0.18
HDAC6-204ENST00000376643 XKR4Q5GH76 650 aa16.16■□□□□ 0.18
HDAC6-204ENST00000376643 GLRA4Q5JXX5 417 aa16.16■□□□□ 0.18
HDAC6-204ENST00000376643 ARL6IP4Q66PJ3 421 aaKnown RBP16.16■□□□□ 0.18
HDAC6-204ENST00000376643 MCTP1Q6DN14 999 aa16.16■□□□□ 0.18
HDAC6-204ENST00000376643 ZC3H14Q6PJT7 736 aaKnown RBP16.16■□□□□ 0.18
HDAC6-204ENST00000376643 NTPCRQ9BSD7 190 aaKnown RBP16.16■□□□□ 0.18
HDAC6-204ENST00000376643 CDT1Q9H211 546 aa16.16■□□□□ 0.18
HDAC6-204ENST00000376643 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.16■□□□□ 0.18
HDAC6-204ENST00000376643 LARSQ9P2J5 1176 aaKnown RBP16.16■□□□□ 0.18
HDAC6-204ENST00000376643 CACNG4Q9UBN1 327 aa16.16■□□□□ 0.18
HDAC6-204ENST00000376643 MAFFQ9ULX9 164 aa16.16■□□□□ 0.18
HDAC6-204ENST00000376643 NUB1Q9Y5A7 615 aa16.16■□□□□ 0.18
HDAC6-204ENST00000376643 NUMBLQ9Y6R0 609 aa16.16■□□□□ 0.18
HDAC6-204ENST00000376643 NARSO43776 548 aaKnown RBP16.15■□□□□ 0.18
HDAC6-204ENST00000376643 TOM1L1O75674 476 aa16.15■□□□□ 0.18
HDAC6-204ENST00000376643 BMP15O95972 392 aa16.15■□□□□ 0.18
HDAC6-204ENST00000376643 KCNE1P15382 129 aa16.15■□□□□ 0.18
HDAC6-204ENST00000376643 TOB1P50616 345 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-204ENST00000376643 NBR1Q14596 966 aa16.15■□□□□ 0.18
HDAC6-204ENST00000376643 PABPC1LQ4VXU2 614 aaKnown RBP16.15■□□□□ 0.18
HDAC6-204ENST00000376643 RINT1Q6NUQ1 792 aa16.15■□□□□ 0.18
HDAC6-204ENST00000376643 FEZF2Q8TBJ5 459 aa16.15■□□□□ 0.18
HDAC6-204ENST00000376643 RSAD2Q8WXG1 361 aa16.15■□□□□ 0.18
HDAC6-204ENST00000376643 BORCS6Q96GS4 357 aa16.15■□□□□ 0.18
HDAC6-204ENST00000376643 SNX27Q96L92 541 aa16.15■□□□□ 0.18
HDAC6-204ENST00000376643 AK8Q96MA6 479 aa16.15■□□□□ 0.18
HDAC6-204ENST00000376643 OXCT2Q9BYC2 517 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-204ENST00000376643 TBC1D17Q9HA65 648 aa16.15■□□□□ 0.18
HDAC6-204ENST00000376643 PTPRHQ9HD43 1115 aa16.15■□□□□ 0.18
HDAC6-204ENST00000376643 CNTN3Q9P232 1028 aa16.15■□□□□ 0.18
HDAC6-204ENST00000376643 CDY1Q9Y6F8 540 aa16.15■□□□□ 0.18
HDAC6-204ENST00000376643 PRR23AA6NEV1 266 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 E9PMD0 336 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 PODXLO00592 558 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 CCL16O15467 120 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 XPOTO43592 962 aaKnown RBP16.14■□□□□ 0.17
HDAC6-204ENST00000376643 LRG1P02750 347 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 PLS3P13797 630 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 ATP2C1P98194 919 aaPredicted RBP16.14■□□□□ 0.17
HDAC6-204ENST00000376643 NOLC1Q14978 699 aaKnown RBP eCLIP16.14■□□□□ 0.17
HDAC6-204ENST00000376643 ANGPT1Q15389 498 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 HYIQ5T013 277 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 SLC8B1Q6J4K2 584 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 ALKAL1Q6UXT8 129 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 RSPO2Q6UXX9 243 aaPredicted RBP16.14■□□□□ 0.17
HDAC6-204ENST00000376643 ZPBP2Q6X784 338 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 C1orf186Q6ZWK4 172 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 ELMOD1Q8N336 334 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 APPL2Q8NEU8 664 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 ZNF461Q8TAF7 563 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 GPR152Q8TDT2 470 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 FGF13Q92913 245 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 TSPAN18Q96SJ8 248 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 PLEKHA5Q9HAU0 1116 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 AVENQ9NQS1 362 aaPredicted RBP16.14■□□□□ 0.17
HDAC6-204ENST00000376643 GDE1Q9NZC3 331 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 CA14Q9ULX7 337 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 SIT1Q9Y3P8 196 aa16.14■□□□□ 0.17
HDAC6-204ENST00000376643 PRRG1O14668 218 aa16.13■□□□□ 0.17
HDAC6-204ENST00000376643 CLDN3O15551 220 aa16.13■□□□□ 0.17
HDAC6-204ENST00000376643 EDN1P05305 212 aa16.13■□□□□ 0.17
HDAC6-204ENST00000376643 PROZP22891 400 aa16.13■□□□□ 0.17
HDAC6-204ENST00000376643 TKTP29401 623 aaKnown RBP16.13■□□□□ 0.17
HDAC6-204ENST00000376643 MAGEA9P43362 315 aa16.13■□□□□ 0.17
HDAC6-204ENST00000376643 PRKCQQ04759 706 aa16.13■□□□□ 0.17
HDAC6-204ENST00000376643 ZRSR1Q15695 479 aaKnown RBP16.13■□□□□ 0.17
HDAC6-204ENST00000376643 TPGS2Q68CL5 300 aa16.13■□□□□ 0.17
HDAC6-204ENST00000376643 DAW1Q8N136 415 aa16.13■□□□□ 0.17
HDAC6-204ENST00000376643 SYT2Q8N9I0 419 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-204ENST00000376643 LEMD2Q8NC56 503 aa16.13■□□□□ 0.17
HDAC6-204ENST00000376643 KIF2CQ99661 725 aa16.13■□□□□ 0.17
HDAC6-204ENST00000376643 RUSC1Q9BVN2 902 aa16.13■□□□□ 0.17
HDAC6-204ENST00000376643 TARS2Q9BW92 718 aaKnown RBP16.13■□□□□ 0.17
HDAC6-204ENST00000376643 USP20Q9Y2K6 914 aa16.13■□□□□ 0.17
HDAC6-204ENST00000376643 MRPS23Q9Y3D9 190 aaKnown RBP16.13■□□□□ 0.17
HDAC6-204ENST00000376643 ARHGEF37A1IGU5 675 aa16.12■□□□□ 0.17
HDAC6-204ENST00000376643 KRBA1A5PL33 1030 aa16.12■□□□□ 0.17
HDAC6-204ENST00000376643 ZNF197O14709 1029 aa16.12■□□□□ 0.17
HDAC6-204ENST00000376643 SLC16A4O15374 487 aa16.12■□□□□ 0.17
HDAC6-204ENST00000376643 PAX3P23760 479 aa16.12■□□□□ 0.17
HDAC6-204ENST00000376643 MATR3P43243 847 aaKnown RBP eCLIP16.12■□□□□ 0.17
HDAC6-204ENST00000376643 STARD6P59095 220 aa16.12■□□□□ 0.17
HDAC6-204ENST00000376643 OSTNP61366 133 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms