RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 NPTX2P47972 431 aa20.28■□□□□ 0.84
HDAC6-202ENST00000376610 DTHD1Q6ZMT9 781 aa20.28■□□□□ 0.84
HDAC6-202ENST00000376610 RTL10Q7L3V2 364 aa20.28■□□□□ 0.84
HDAC6-202ENST00000376610 DDX27Q96GQ7 796 aaKnown RBP20.28■□□□□ 0.84
HDAC6-202ENST00000376610 SHDQ96IW2 340 aa20.28■□□□□ 0.84
HDAC6-202ENST00000376610 ACO2Q99798 780 aaKnown RBP20.28■□□□□ 0.84
HDAC6-202ENST00000376610 TMEM134Q9H6X4 195 aa20.28■□□□□ 0.84
HDAC6-202ENST00000376610 C17orf75Q9HAS0 396 aa20.28■□□□□ 0.84
HDAC6-202ENST00000376610 KMT5AQ9NQR1 393 aa20.28■□□□□ 0.84
HDAC6-202ENST00000376610 SLC2A4RGQ9NR83 387 aa20.28■□□□□ 0.84
HDAC6-202ENST00000376610 KCNG1Q9UIX4 513 aa20.28■□□□□ 0.84
HDAC6-202ENST00000376610 PCDHB6Q9Y5E3 794 aa20.28■□□□□ 0.84
HDAC6-202ENST00000376610 CDY1Q9Y6F8 540 aa20.28■□□□□ 0.84
HDAC6-202ENST00000376610 SMIM28A0A1B0GU29 152 aa20.27■□□□□ 0.84
HDAC6-202ENST00000376610 E9PMD0 336 aa20.27■□□□□ 0.84
HDAC6-202ENST00000376610 ADAM12O43184 909 aa20.27■□□□□ 0.84
HDAC6-202ENST00000376610 HIP1RO75146 1068 aa20.27■□□□□ 0.84
HDAC6-202ENST00000376610 POU2F2P09086 479 aa20.27■□□□□ 0.84
HDAC6-202ENST00000376610 PRPHP41219 470 aa20.27■□□□□ 0.84
HDAC6-202ENST00000376610 OSTNP61366 133 aa20.27■□□□□ 0.84
HDAC6-202ENST00000376610 UPP1Q16831 310 aa20.27■□□□□ 0.84
HDAC6-202ENST00000376610 PHLDB3Q6NSJ2 640 aa20.27■□□□□ 0.84
HDAC6-202ENST00000376610 CDT1Q9H211 546 aa20.27■□□□□ 0.84
HDAC6-202ENST00000376610 BACE2Q9Y5Z0 518 aa20.27■□□□□ 0.84
HDAC6-202ENST00000376610 CITO14578 2027 aa20.27■□□□□ 0.84
HDAC6-202ENST00000376610 CFAP54Q96N23 3096 aa20.27■□□□□ 0.84
HDAC6-202ENST00000376610 MYH15Q9Y2K3 1946 aa20.26■□□□□ 0.83
HDAC6-202ENST00000376610 TKTP29401 623 aaKnown RBP20.26■□□□□ 0.83
HDAC6-202ENST00000376610 NTHL1P78549 312 aa20.26■□□□□ 0.83
HDAC6-202ENST00000376610 ZRSR1Q15695 479 aaKnown RBP20.26■□□□□ 0.83
HDAC6-202ENST00000376610 PABPC1LQ4VXU2 614 aaKnown RBP20.26■□□□□ 0.83
HDAC6-202ENST00000376610 FGF13Q92913 245 aa20.26■□□□□ 0.83
HDAC6-202ENST00000376610 ACAP3Q96P50 834 aa20.26■□□□□ 0.83
HDAC6-202ENST00000376610 TIPINQ9BVW5 301 aa20.26■□□□□ 0.83
HDAC6-202ENST00000376610 GOLGA2P5Q9HBQ8 144 aa20.26■□□□□ 0.83
HDAC6-202ENST00000376610 SIT1Q9Y3P8 196 aa20.26■□□□□ 0.83
HDAC6-202ENST00000376610 GVINP1Q7Z2Y8 2422 aa20.25■□□□□ 0.83
HDAC6-202ENST00000376610 MCF2P10911 925 aa20.25■□□□□ 0.83
HDAC6-202ENST00000376610 ELF1P32519 619 aa20.25■□□□□ 0.83
HDAC6-202ENST00000376610 TOB1P50616 345 aaPredicted RBP20.25■□□□□ 0.83
HDAC6-202ENST00000376610 SMTNP53814 917 aa20.25■□□□□ 0.83
HDAC6-202ENST00000376610 STRN3Q13033 797 aa20.25■□□□□ 0.83
HDAC6-202ENST00000376610 SPECC1Q5M775 1068 aa20.25■□□□□ 0.83
HDAC6-202ENST00000376610 MCTP1Q6DN14 999 aa20.25■□□□□ 0.83
HDAC6-202ENST00000376610 PARM1Q6UWI2 310 aa20.25■□□□□ 0.83
HDAC6-202ENST00000376610 CEP120Q8N960 986 aa20.25■□□□□ 0.83
HDAC6-202ENST00000376610 FGF14Q92915 247 aa20.25■□□□□ 0.83
HDAC6-202ENST00000376610 ARHGAP28Q9P2N2 729 aa20.25■□□□□ 0.83
HDAC6-202ENST00000376610 KCNH3Q9ULD8 1083 aa20.25■□□□□ 0.83
HDAC6-202ENST00000376610 NUB1Q9Y5A7 615 aa20.25■□□□□ 0.83
HDAC6-202ENST00000376610 MYH11P35749 1972 aa20.25■□□□□ 0.83
HDAC6-202ENST00000376610 PP2D1A8MPX8 630 aa20.24■□□□□ 0.83
HDAC6-202ENST00000376610 I3L4J1 428 aa20.24■□□□□ 0.83
HDAC6-202ENST00000376610 PODXLO00592 558 aa20.24■□□□□ 0.83
HDAC6-202ENST00000376610 BRCC3P46736 316 aa20.24■□□□□ 0.83
HDAC6-202ENST00000376610 RILPL1Q5EBL4 403 aa20.24■□□□□ 0.83
HDAC6-202ENST00000376610 RINT1Q6NUQ1 792 aa20.24■□□□□ 0.83
HDAC6-202ENST00000376610 MPZL3Q6UWV2 235 aa20.24■□□□□ 0.83
HDAC6-202ENST00000376610 DAW1Q8N136 415 aa20.24■□□□□ 0.83
HDAC6-202ENST00000376610 ST13P5Q8NFI4 369 aaPredicted RBP20.24■□□□□ 0.83
HDAC6-202ENST00000376610 CDK5RAP3Q96JB5 506 aa20.24■□□□□ 0.83
HDAC6-202ENST00000376610 RUSC1Q9BVN2 902 aa20.24■□□□□ 0.83
HDAC6-202ENST00000376610 TARS2Q9BW92 718 aaKnown RBP20.24■□□□□ 0.83
HDAC6-202ENST00000376610 PTPRHQ9HD43 1115 aa20.24■□□□□ 0.83
HDAC6-202ENST00000376610 MRPS23Q9Y3D9 190 aaKnown RBP20.24■□□□□ 0.83
HDAC6-202ENST00000376610 H7C4K7 107 aa20.23■□□□□ 0.83
HDAC6-202ENST00000376610 SYN3O14994 580 aa20.23■□□□□ 0.83
HDAC6-202ENST00000376610 LRG1P02750 347 aa20.23■□□□□ 0.83
HDAC6-202ENST00000376610 HARSP12081 509 aaKnown RBP20.23■□□□□ 0.83
HDAC6-202ENST00000376610 CDC25AP30304 524 aa20.23■□□□□ 0.83
HDAC6-202ENST00000376610 RPL9P32969 192 aaKnown RBP20.23■□□□□ 0.83
HDAC6-202ENST00000376610 GPC5P78333 572 aa20.23■□□□□ 0.83
HDAC6-202ENST00000376610 PFKPQ01813 784 aa20.23■□□□□ 0.83
HDAC6-202ENST00000376610 XKR4Q5GH76 650 aa20.23■□□□□ 0.83
HDAC6-202ENST00000376610 ALKAL1Q6UXT8 129 aa20.23■□□□□ 0.83
HDAC6-202ENST00000376610 C1orf186Q6ZWK4 172 aa20.23■□□□□ 0.83
HDAC6-202ENST00000376610 KCTD17Q8N5Z5 321 aa20.23■□□□□ 0.83
HDAC6-202ENST00000376610 C3orf58Q8NDZ4 430 aa20.23■□□□□ 0.83
HDAC6-202ENST00000376610 ITFG1Q8TB96 612 aa20.23■□□□□ 0.83
HDAC6-202ENST00000376610 KCNG4Q8TDN1 519 aa20.23■□□□□ 0.83
HDAC6-202ENST00000376610 SNX27Q96L92 541 aa20.23■□□□□ 0.83
HDAC6-202ENST00000376610 SEMA4AQ9H3S1 761 aa20.23■□□□□ 0.83
HDAC6-202ENST00000376610 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.23■□□□□ 0.83
HDAC6-202ENST00000376610 EP300Q09472 2414 aaPredicted RBP20.22■□□□□ 0.83
HDAC6-202ENST00000376610 PRRG1O14668 218 aa20.22■□□□□ 0.83
HDAC6-202ENST00000376610 SLC16A4O15374 487 aa20.22■□□□□ 0.83
HDAC6-202ENST00000376610 DCNP07585 359 aaKnown RBP20.22■□□□□ 0.83
HDAC6-202ENST00000376610 KCNE1P15382 129 aa20.22■□□□□ 0.83
HDAC6-202ENST00000376610 GUCY2CP25092 1073 aa20.22■□□□□ 0.83
HDAC6-202ENST00000376610 ROR1Q01973 937 aa20.22■□□□□ 0.83
HDAC6-202ENST00000376610 SOX4Q06945 474 aaPredicted RBP20.22■□□□□ 0.83
HDAC6-202ENST00000376610 VARS2Q5ST30 1063 aaKnown RBP20.22■□□□□ 0.83
HDAC6-202ENST00000376610 ZC3H14Q6PJT7 736 aaKnown RBP20.22■□□□□ 0.83
HDAC6-202ENST00000376610 ADSSL1Q8N142 457 aa20.22■□□□□ 0.83
HDAC6-202ENST00000376610 ZNF461Q8TAF7 563 aa20.22■□□□□ 0.83
HDAC6-202ENST00000376610 SPIRE2Q8WWL2 714 aa20.22■□□□□ 0.83
HDAC6-202ENST00000376610 RPP25Q9BUL9 199 aaKnown RBP20.22■□□□□ 0.83
HDAC6-202ENST00000376610 HCFC1R1Q9NWW0 138 aa20.22■□□□□ 0.83
HDAC6-202ENST00000376610 CNTN3Q9P232 1028 aa20.22■□□□□ 0.83
HDAC6-202ENST00000376610 ANKFY1Q9P2R3 1169 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms