RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 PDZD7Q9H5P4 517 aa14.49□□□□□ -0.09
CLCN6-205ENST00000376492 ANKEF1Q9NU02 776 aa14.49□□□□□ -0.09
CLCN6-205ENST00000376492 SNTG2Q9NY99 539 aa14.49□□□□□ -0.09
CLCN6-205ENST00000376492 TPRP12270 2363 aaKnown RBP14.49□□□□□ -0.09
CLCN6-205ENST00000376492 MTCL1Q9Y4B5 1905 aaKnown RBP14.49□□□□□ -0.09
CLCN6-205ENST00000376492 ACACBO00763 2458 aa14.48□□□□□ -0.09
CLCN6-205ENST00000376492 SHISA7A6NL88 538 aa14.48□□□□□ -0.09
CLCN6-205ENST00000376492 BAG4O95429 457 aaKnown RBP14.48□□□□□ -0.09
CLCN6-205ENST00000376492 OR1D2P34982 312 aa14.48□□□□□ -0.09
CLCN6-205ENST00000376492 ATXN1P54253 815 aaKnown RBP14.48□□□□□ -0.09
CLCN6-205ENST00000376492 SLC5A9Q2M3M2 681 aa14.48□□□□□ -0.09
CLCN6-205ENST00000376492 ZBTB41Q5SVQ8 909 aa14.48□□□□□ -0.09
CLCN6-205ENST00000376492 PPP4R3CPQ6ZMV5 832 aa14.48□□□□□ -0.09
CLCN6-205ENST00000376492 NOSTRINQ8IVI9 506 aa14.48□□□□□ -0.09
CLCN6-205ENST00000376492 EPC1Q9H2F5 836 aa14.48□□□□□ -0.09
CLCN6-205ENST00000376492 ZSCAN32Q9NX65 697 aa14.48□□□□□ -0.09
CLCN6-205ENST00000376492 KIF3AQ9Y496 699 aa14.48□□□□□ -0.09
CLCN6-205ENST00000376492 PATJQ8NI35 1801 aa14.48□□□□□ -0.09
CLCN6-205ENST00000376492 MIA3Q5JRA6 1907 aa14.47□□□□□ -0.09
CLCN6-205ENST00000376492 WNT7AO00755 349 aa14.47□□□□□ -0.09
CLCN6-205ENST00000376492 LILRB5O75023 590 aa14.47□□□□□ -0.09
CLCN6-205ENST00000376492 EDN1P05305 212 aa14.47□□□□□ -0.09
CLCN6-205ENST00000376492 THP07101 528 aa14.47□□□□□ -0.09
CLCN6-205ENST00000376492 POU2F2P09086 479 aa14.47□□□□□ -0.09
CLCN6-205ENST00000376492 U2AF2P26368 475 aaKnown RBP eCLIP14.47□□□□□ -0.096e-7■■□□□ 12.6
CLCN6-205ENST00000376492 CUL4AQ13619 759 aa14.47□□□□□ -0.09
CLCN6-205ENST00000376492 RAB33AQ14088 237 aa14.47□□□□□ -0.09
CLCN6-205ENST00000376492 CDCA2Q69YH5 1023 aaPredicted RBP14.47□□□□□ -0.09
CLCN6-205ENST00000376492 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.47□□□□□ -0.09
CLCN6-205ENST00000376492 NELL1Q92832 810 aa14.47□□□□□ -0.09
CLCN6-205ENST00000376492 CLDN23Q96B33 292 aa14.47□□□□□ -0.09
CLCN6-205ENST00000376492 MCRS1Q96EZ8 462 aa14.47□□□□□ -0.09
CLCN6-205ENST00000376492 PRMT8Q9NR22 394 aaPredicted RBP14.47□□□□□ -0.09
CLCN6-205ENST00000376492 HEBP1Q9NRV9 189 aa14.47□□□□□ -0.09
CLCN6-205ENST00000376492 MTRRQ9UBK8 725 aa14.47□□□□□ -0.09
CLCN6-205ENST00000376492 KCNH3Q9ULD8 1083 aa14.47□□□□□ -0.09
CLCN6-205ENST00000376492 PCDHA12Q9UN75 941 aa14.47□□□□□ -0.09
CLCN6-205ENST00000376492 MRPS23Q9Y3D9 190 aaKnown RBP14.47□□□□□ -0.09
CLCN6-205ENST00000376492 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.47□□□□□ -0.09
CLCN6-205ENST00000376492 CDY1Q9Y6F8 540 aa14.47□□□□□ -0.09
CLCN6-205ENST00000376492 KMT2BQ9UMN6 2715 aaPredicted RBP14.47□□□□□ -0.09
CLCN6-205ENST00000376492 I3L4J1 428 aa14.46□□□□□ -0.09
CLCN6-205ENST00000376492 RHOP08100 348 aa14.46□□□□□ -0.09
CLCN6-205ENST00000376492 CEBPBP17676 345 aa14.46□□□□□ -0.09
CLCN6-205ENST00000376492 LIG1P18858 919 aa14.46□□□□□ -0.09
CLCN6-205ENST00000376492 FGFR3P22607 806 aa14.46□□□□□ -0.09
CLCN6-205ENST00000376492 TGM1P22735 817 aa14.46□□□□□ -0.09
CLCN6-205ENST00000376492 MAGEA9P43362 315 aa14.46□□□□□ -0.09
CLCN6-205ENST00000376492 ELAVL2Q12926 359 aaKnown RBP14.46□□□□□ -0.09
CLCN6-205ENST00000376492 MTAPQ13126 283 aa14.46□□□□□ -0.09
CLCN6-205ENST00000376492 FZD5Q13467 585 aa14.46□□□□□ -0.09
CLCN6-205ENST00000376492 CALCRLQ16602 461 aa14.46□□□□□ -0.09
CLCN6-205ENST00000376492 TMEM132AQ24JP5 1023 aa14.46□□□□□ -0.09
CLCN6-205ENST00000376492 GLRA4Q5JXX5 417 aa14.46□□□□□ -0.09
CLCN6-205ENST00000376492 PDXDC1Q6P996 788 aa14.46□□□□□ -0.09
CLCN6-205ENST00000376492 BSNDQ8WZ55 320 aa14.46□□□□□ -0.09
CLCN6-205ENST00000376492 PRIMPOLQ96LW4 560 aa14.46□□□□□ -0.09
CLCN6-205ENST00000376492 FZD8Q9H461 694 aa14.46□□□□□ -0.09
CLCN6-205ENST00000376492 TTC12Q9H892 705 aaPredicted RBP14.46□□□□□ -0.09
CLCN6-205ENST00000376492 PARD6AQ9NPB6 346 aa14.46□□□□□ -0.09
CLCN6-205ENST00000376492 PRMT7Q9NVM4 692 aaPredicted RBP14.46□□□□□ -0.09
CLCN6-205ENST00000376492 CDV3Q9UKY7 258 aaKnown RBP14.46□□□□□ -0.09
CLCN6-205ENST00000376492 USP18Q9UMW8 372 aa14.46□□□□□ -0.09
CLCN6-205ENST00000376492 DCDC2BA2VCK2 349 aa14.45□□□□□ -0.1
CLCN6-205ENST00000376492 NRG2O14511 850 aaPredicted RBP14.45□□□□□ -0.1
CLCN6-205ENST00000376492 N4BP3O15049 544 aa14.45□□□□□ -0.1
CLCN6-205ENST00000376492 ECI2O75521 394 aa14.45□□□□□ -0.1
CLCN6-205ENST00000376492 GJB2P29033 226 aa14.45□□□□□ -0.1
CLCN6-205ENST00000376492 TKTP29401 623 aaKnown RBP14.45□□□□□ -0.1
CLCN6-205ENST00000376492 TXKP42681 527 aa14.45□□□□□ -0.1
CLCN6-205ENST00000376492 RPS9P46781 194 aaKnown RBP14.45□□□□□ -0.1
CLCN6-205ENST00000376492 TRAPPC10P48553 1259 aa14.45□□□□□ -0.1
CLCN6-205ENST00000376492 LMNB2Q03252 620 aa14.45□□□□□ -0.1
CLCN6-205ENST00000376492 UVSSAQ2YD98 709 aa14.45□□□□□ -0.1
CLCN6-205ENST00000376492 EEF1DP3Q658K8 133 aa14.45□□□□□ -0.1
CLCN6-205ENST00000376492 TANGO2Q6ICL3 276 aa14.45□□□□□ -0.1
CLCN6-205ENST00000376492 CD300LGQ6UXG3 332 aa14.45□□□□□ -0.1
CLCN6-205ENST00000376492 ZNF852Q6ZMS4 543 aa14.45□□□□□ -0.1
CLCN6-205ENST00000376492 C3orf58Q8NDZ4 430 aa14.45□□□□□ -0.1
CLCN6-205ENST00000376492 SECISBP2LQ93073 1101 aaKnown RBP14.45□□□□□ -0.1
CLCN6-205ENST00000376492 MTMR9Q96QG7 549 aa14.45□□□□□ -0.1
CLCN6-205ENST00000376492 GOLGA2P5Q9HBQ8 144 aa14.45□□□□□ -0.1
CLCN6-205ENST00000376492 NDRG2Q9UN36 371 aaKnown RBP14.45□□□□□ -0.1
CLCN6-205ENST00000376492 SMC3Q9UQE7 1217 aa14.45□□□□□ -0.1
CLCN6-205ENST00000376492 GDAQ9Y2T3 454 aa14.45□□□□□ -0.1
CLCN6-205ENST00000376492 NEMFO60524 1076 aa14.44□□□□□ -0.1
CLCN6-205ENST00000376492 B3GAT3O94766 335 aa14.44□□□□□ -0.1
CLCN6-205ENST00000376492 PRKCBP05771 671 aa14.44□□□□□ -0.1
CLCN6-205ENST00000376492 SPATA31C1P0DKV0 1188 aa14.44□□□□□ -0.1
CLCN6-205ENST00000376492 TDGF1P13385 188 aa14.44□□□□□ -0.1
CLCN6-205ENST00000376492 FCARP24071 287 aa14.44□□□□□ -0.1
CLCN6-205ENST00000376492 CLCNKBP51801 687 aa14.44□□□□□ -0.1
CLCN6-205ENST00000376492 ADCY1Q08828 1119 aa14.44□□□□□ -0.1
CLCN6-205ENST00000376492 ORC2Q13416 577 aaPredicted RBP14.44□□□□□ -0.1
CLCN6-205ENST00000376492 PRPF4BQ13523 1007 aaKnown RBP14.44□□□□□ -0.1
CLCN6-205ENST00000376492 GNL2Q13823 731 aaKnown RBP14.44□□□□□ -0.1
CLCN6-205ENST00000376492 GRM2Q14416 872 aa14.44□□□□□ -0.1
CLCN6-205ENST00000376492 LPAL2Q16609 132 aa14.44□□□□□ -0.1
CLCN6-205ENST00000376492 FAM187BQ17R55 369 aa14.44□□□□□ -0.1
CLCN6-205ENST00000376492 HSCBQ8IWL3 235 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms