RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.13□□□□□ -0.473e-7■■■□□ 15.3
DDX39B-201ENST00000376177 RBM12Q9NTZ6 932 aaKnown RBP12.13□□□□□ -0.47
DDX39B-201ENST00000376177 DDX19AQ9NUU7 478 aaKnown RBP12.13□□□□□ -0.47
DDX39B-201ENST00000376177 KLK14Q9P0G3 267 aa12.13□□□□□ -0.47
DDX39B-201ENST00000376177 COL4A3BPQ9Y5P4 624 aa12.13□□□□□ -0.47
DDX39B-201ENST00000376177 K7ESF4 209 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 GAS7O60861 476 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 ECI2O75521 394 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 KCNK5O95279 499 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 C1RP00736 705 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 HNRNPA1P09651 372 aaKnown RBP eCLIP12.12□□□□□ -0.473e-6■□□□□ 11
DDX39B-201ENST00000376177 CHRNB1P11230 501 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 CDC27P30260 824 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 CIITAP33076 1130 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 DNM2P50570 870 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 CCR3P51677 355 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 DHX8Q14562 1220 aaKnown RBP12.12□□□□□ -0.47
DDX39B-201ENST00000376177 SYCP1Q15431 976 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 TSGA10IPQ3SY00 556 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 XKR3Q5GH77 459 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 AXDND1Q5T1B0 1012 aaPredicted RBP12.12□□□□□ -0.47
DDX39B-201ENST00000376177 STPG1Q5TH74 334 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 PSAPL1Q6NUJ1 521 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 APOA5Q6Q788 366 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 Q6ZS52 159 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 RUFY3Q7L099 469 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 CDR2LQ86X02 465 aaPredicted RBP12.12□□□□□ -0.47
DDX39B-201ENST00000376177 TMTC2Q8N394 836 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 FAM200AQ8TCP9 573 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 DDX1Q92499 740 aaKnown RBP12.12□□□□□ -0.47
DDX39B-201ENST00000376177 SLC5A5Q92911 643 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 PKNOX2Q96KN3 472 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 COLEC11Q9BWP8 271 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 ZMYND15Q9H091 742 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 FAM13BQ9NYF5 915 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 MRPS17Q9Y2R5 130 aaKnown RBP12.12□□□□□ -0.47
DDX39B-201ENST00000376177 TRIP11Q15643 1979 aa12.12□□□□□ -0.47
DDX39B-201ENST00000376177 SMG1Q96Q15 3661 aaKnown RBP12.12□□□□□ -0.47
DDX39B-201ENST00000376177 SRRM3A6NNA2 597 aaPredicted RBP12.11□□□□□ -0.47
DDX39B-201ENST00000376177 GADD45BO75293 160 aaPredicted RBP12.11□□□□□ -0.47
DDX39B-201ENST00000376177 CXCL12P48061 93 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 LIMK1P53667 647 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 CDC42EP1Q00587 391 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 RING1Q06587 406 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 PSMD5Q16401 504 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 LRCH2Q5VUJ6 765 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 MAMSTRQ6ZN01 415 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 SGMS1Q86VZ5 419 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 CEP57Q86XR8 500 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 KDF1Q8NAX2 398 aaPredicted RBP12.11□□□□□ -0.47
DDX39B-201ENST00000376177 PRPF31Q8WWY3 499 aaKnown RBP12.11□□□□□ -0.47
DDX39B-201ENST00000376177 FAM3CQ92520 227 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 TCEAL4Q96EI5 215 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 MTA3Q9BTC8 594 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 CCDC94Q9BW85 323 aaPredicted RBP12.11□□□□□ -0.47
DDX39B-201ENST00000376177 WASF3Q9UPY6 502 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 MTMR6Q9Y217 621 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 MRPS23Q9Y3D9 190 aaKnown RBP12.11□□□□□ -0.47
DDX39B-201ENST00000376177 ATG2BQ96BY7 2078 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 TSPAN1O60635 241 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 TADA2AO75478 443 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 PSMD10O75832 226 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 KIF4AO95239 1232 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 RHOP08100 348 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 GJB2P29033 226 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 HOXA9P31269 272 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 LAMTOR4Q0VGL1 99 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 FOXC1Q12948 553 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 NECTIN1Q15223 517 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 RTN1Q16799 776 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 FAM171A1Q5VUB5 890 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 TCEAL6Q6IPX3 200 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 MIER3Q7Z3K6 550 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 TCEAL3Q969E4 200 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 ELSPBP1Q96BH3 223 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 TEKT3Q9BXF9 490 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 BRD9Q9H8M2 597 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 WRAP73Q9P2S5 460 aaPredicted RBP12.11□□□□□ -0.47
DDX39B-201ENST00000376177 KIF3AQ9Y496 699 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 PIAS3Q9Y6X2 628 aa12.11□□□□□ -0.47
DDX39B-201ENST00000376177 CASTOR2A6NHX0 329 aa12.1□□□□□ -0.47
DDX39B-201ENST00000376177 SLC27A2O14975 620 aa12.1□□□□□ -0.47
DDX39B-201ENST00000376177 NEMFO60524 1076 aa12.1□□□□□ -0.47
DDX39B-201ENST00000376177 XYLBO75191 536 aa12.1□□□□□ -0.47
DDX39B-201ENST00000376177 CCNE1P24864 410 aa12.1□□□□□ -0.47
DDX39B-201ENST00000376177 SFNP31947 248 aa12.1□□□□□ -0.47
DDX39B-201ENST00000376177 SOX9P48436 509 aa12.1□□□□□ -0.47
DDX39B-201ENST00000376177 JAK3P52333 1124 aa12.1□□□□□ -0.47
DDX39B-201ENST00000376177 FAM78AQ5JUQ0 283 aa12.1□□□□□ -0.47
DDX39B-201ENST00000376177 FOXD4L5Q5VV16 416 aaPredicted RBP12.1□□□□□ -0.47
DDX39B-201ENST00000376177 ATL3Q6DD88 541 aa12.1□□□□□ -0.47
DDX39B-201ENST00000376177 B3GNT9Q6UX72 402 aa12.1□□□□□ -0.47
DDX39B-201ENST00000376177 VITQ6UXI7 678 aa12.1□□□□□ -0.47
DDX39B-201ENST00000376177 REXO1Q8N1G1 1221 aaKnown RBP12.1□□□□□ -0.47
DDX39B-201ENST00000376177 FOXD4L4Q8WXT5 416 aaPredicted RBP12.1□□□□□ -0.47
DDX39B-201ENST00000376177 DNASE1L2Q92874 299 aa12.1□□□□□ -0.47
DDX39B-201ENST00000376177 ZSWIM3Q96MP5 696 aa12.1□□□□□ -0.47
DDX39B-201ENST00000376177 RIT2Q99578 217 aa12.1□□□□□ -0.47
DDX39B-201ENST00000376177 LSM14BQ9BX40 385 aaKnown RBP12.1□□□□□ -0.47
DDX39B-201ENST00000376177 ZNF334Q9HCZ1 680 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms