RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 TRIM60Q495X7 471 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 KLHDC7AQ5VTJ3 777 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 TDRD10Q5VZ19 366 aaKnown RBP11.31□□□□□ -0.6
PDPN-203ENST00000376061 TWF2Q6IBS0 349 aaKnown RBP11.31□□□□□ -0.6
PDPN-203ENST00000376061 SLC39A5Q6ZMH5 540 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 LRRC8DQ7L1W4 858 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 ANKRD33Q7Z3H0 272 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 TMEM139Q8IV31 216 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 USP38Q8NB14 1042 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 TAS1R2Q8TE23 839 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 BAP1Q92560 729 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 SEMA4DQ92854 862 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 ACAP3Q96P50 834 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 DNAJC7Q99615 494 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 EDEM3Q9BZQ6 932 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 TRIM6Q9C030 488 aaPredicted RBP11.31□□□□□ -0.6
PDPN-203ENST00000376061 MTMR12Q9C0I1 747 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 PRDM10Q9NQV6 1147 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 ABHD10Q9NUJ1 306 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 PADI3Q9ULW8 664 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 LUC7L2Q9Y383 392 aaKnown RBP11.31□□□□□ -0.6
PDPN-203ENST00000376061 HES2Q9Y543 173 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 FHOD1Q9Y613 1164 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 SQORQ9Y6N5 450 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 LACTBL1A8MY62 500 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 TLR3O15455 904 aaKnown RBP11.3□□□□□ -0.6
PDPN-203ENST00000376061 LRRN2O75325 713 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 RECQL4O94761 1208 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 HLA-DRAP01903 254 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 NFICP08651 508 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 UCHL3P15374 230 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 SELPP16109 830 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 FECHP22830 423 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 PIK3CAP42336 1068 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 AP3M2P53677 418 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 BIRC3Q13489 604 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 BFSP2Q13515 415 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 DSC3Q14574 896 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 C1orf53Q5VUE5 145 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 JADE1Q6IE81 842 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 IQCEQ6IPM2 695 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 PDXDC1Q6P996 788 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 GJB7Q6PEY0 223 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 EHBP1Q8NDI1 1231 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 FBXL13Q8NEE6 735 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 SNX27Q96L92 541 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 TMX1Q9H3N1 280 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 NLRC4Q9NPP4 1024 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 SNTG2Q9NY99 539 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 APEX2Q9UBZ4 518 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 FBXL5Q9UKA1 691 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 IPPQ9Y573 584 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 ALPK3Q96L96 1907 aa11.3□□□□□ -0.6
PDPN-203ENST00000376061 LRRC53A6NM62 1247 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 MGEA5O60502 916 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 VNN1O95497 513 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 RFX1P22670 979 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 TFAMQ00059 246 aaKnown RBP11.29□□□□□ -0.6
PDPN-203ENST00000376061 TLE2Q04725 743 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 E4F1Q66K89 784 aaPredicted RBP11.29□□□□□ -0.6
PDPN-203ENST00000376061 CACNA2D4Q7Z3S7 1137 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 ARHGEF19Q8IW93 802 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 SMG8Q8ND04 991 aaKnown RBP11.29□□□□□ -0.6
PDPN-203ENST00000376061 CCDC112Q8NEF3 446 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 OR8K1Q8NGG5 319 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 APOL6Q9BWW8 343 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 NAA15Q9BXJ9 866 aaKnown RBP11.29□□□□□ -0.6
PDPN-203ENST00000376061 MCOLN1Q9GZU1 580 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 ASB7Q9H672 318 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 C11orf49Q9H6J7 331 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 PLEKHA5Q9HAU0 1116 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 CHST12Q9NRB3 414 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 FAM105AQ9NUU6 356 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 RAB20Q9NX57 234 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.29□□□□□ -0.6
PDPN-203ENST00000376061 ZKSCAN5Q9Y2L8 839 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 PCDHB2Q9Y5E7 798 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 UMODL1Q5DID0 1318 aa11.29□□□□□ -0.6
PDPN-203ENST00000376061 DCDC2CA8MYV0 355 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 TNNC2P02585 160 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 TMEM191BP0C7N4 346 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 SKILP12757 684 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 YARSP54577 528 aaKnown RBP11.28□□□□□ -0.6
PDPN-203ENST00000376061 JAM2P57087 298 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 FAAP100Q0VG06 881 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 TMEM132DQ14C87 1099 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 MEA1Q16626 185 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 DUOXA2Q1HG44 320 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 SCARA3Q6AZY7 606 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 PHLDB3Q6NSJ2 640 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 RRAGAQ7L523 313 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 TRAPPC11Q7Z392 1133 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 ZNF397Q8NF99 534 aaPredicted RBP11.28□□□□□ -0.6
PDPN-203ENST00000376061 ANKRD36BP1Q96IX9 119 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 PAWRQ96IZ0 340 aaKnown RBP11.28□□□□□ -0.6
PDPN-203ENST00000376061 TOX2Q96NM4 488 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 NT5C1BQ96P26 610 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 BAG1Q99933 345 aaPredicted RBP11.28□□□□□ -0.6
PDPN-203ENST00000376061 PI4K2AQ9BTU6 479 aa11.28□□□□□ -0.6
PDPN-203ENST00000376061 CXCL16Q9H2A7 254 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms