RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 FAM84AQ96KN4 292 aa19.35■□□□□ 0.69
HLA-DQB1-201ENST00000374943 TCHPQ9BT92 498 aa19.35■□□□□ 0.69
HLA-DQB1-201ENST00000374943 TUT1Q9H6E5 874 aaKnown RBP19.35■□□□□ 0.69
HLA-DQB1-201ENST00000374943 CITO14578 2027 aa19.35■□□□□ 0.69
HLA-DQB1-201ENST00000374943 INO80B-WBP1J3KQ70 363 aa19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 TULP1O00294 542 aaPredicted RBP19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 ERLIN1O75477 346 aa19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 MTA2O94776 668 aa19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 FTLP02792 175 aaPredicted RBP19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 GJB1P08034 283 aa19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 MMEP08473 750 aa19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 HOXC6P09630 235 aa19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 ABCB4P21439 1286 aa19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 TBXAS1P24557 533 aaPredicted RBP19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 TNFSF9P41273 254 aa19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 MAP2K5Q13163 448 aa19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 PEX26Q7Z412 305 aa19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 ZBTB33Q86T24 672 aa19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 NT5DC3Q86UY8 548 aa19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 INO80BQ9C086 356 aaPredicted RBP19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 IFT122Q9HBG6 1241 aa19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 OSGEPQ9NPF4 335 aa19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 OGFRQ9NZT2 677 aa19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 CPA4Q9UI42 421 aa19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 ZHX1Q9UKY1 873 aaPredicted RBP19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 PACSIN2Q9UNF0 486 aaPredicted RBP19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 RALGAPA2Q2PPJ7 1873 aa19.34■□□□□ 0.69
HLA-DQB1-201ENST00000374943 CLTAP09496 248 aa19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 ACO1P21399 889 aaKnown RBP19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 TMOD1P28289 359 aa19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 BPIFB4P59827 614 aa19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 VSNL1P62760 191 aa19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 IGBP1P78318 339 aa19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 GPC5P78333 572 aa19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 CUL2Q13617 745 aa19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 DGKDQ16760 1214 aa19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 ZNF568Q3ZCX4 644 aa19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 SEZ6Q53EL9 994 aa19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 COL13A1Q5TAT6 717 aaPredicted RBP19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 MTHFD1LQ6UB35 978 aa19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 DAAM2Q86T65 1068 aa19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 UBE2Q2Q8WVN8 375 aa19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 ZBTB10Q96DT7 871 aa19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 HES6Q96HZ4 224 aa19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 MINDY3Q9H8M7 445 aa19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 APOBEC3GQ9HC16 384 aaKnown RBP19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 CNTN6Q9UQ52 1028 aa19.33■□□□□ 0.69
HLA-DQB1-201ENST00000374943 BUB1BO60566 1050 aaPredicted RBP19.33■□□□□ 0.68
HLA-DQB1-201ENST00000374943 KRT5P13647 590 aa19.33■□□□□ 0.68
HLA-DQB1-201ENST00000374943 ZNF157P51786 506 aaPredicted RBP19.33■□□□□ 0.68
HLA-DQB1-201ENST00000374943 NOP14P78316 857 aaKnown RBP19.33■□□□□ 0.68
HLA-DQB1-201ENST00000374943 POU5F1Q01860 360 aaKnown RBP19.33■□□□□ 0.68
HLA-DQB1-201ENST00000374943 NCOA4Q13772 614 aa19.33■□□□□ 0.68
HLA-DQB1-201ENST00000374943 AMHR2Q16671 573 aa19.33■□□□□ 0.68
HLA-DQB1-201ENST00000374943 TAF3Q5VWG9 929 aa19.33■□□□□ 0.68
HLA-DQB1-201ENST00000374943 CCDC70Q6NSX1 233 aa19.33■□□□□ 0.68
HLA-DQB1-201ENST00000374943 ARID3AQ99856 593 aa19.33■□□□□ 0.68
HLA-DQB1-201ENST00000374943 PCDHB2Q9Y5E7 798 aa19.33■□□□□ 0.68
HLA-DQB1-201ENST00000374943 B4GALT5O43286 388 aa19.32■□□□□ 0.68
HLA-DQB1-201ENST00000374943 SEC31AO94979 1220 aaKnown RBP19.32■□□□□ 0.68
HLA-DQB1-201ENST00000374943 ASS1P00966 412 aaKnown RBP19.32■□□□□ 0.68
HLA-DQB1-201ENST00000374943 PPFIA1Q13136 1202 aa19.32■□□□□ 0.68
HLA-DQB1-201ENST00000374943 TAF1CQ15572 869 aaPredicted RBP19.32■□□□□ 0.68
HLA-DQB1-201ENST00000374943 C11orf63Q6NUN7 778 aa19.32■□□□□ 0.68
HLA-DQB1-201ENST00000374943 ACTRT1Q8TDG2 376 aa19.32■□□□□ 0.68
HLA-DQB1-201ENST00000374943 USP6NLQ92738 828 aa19.32■□□□□ 0.68
HLA-DQB1-201ENST00000374943 CDT1Q9H211 546 aa19.32■□□□□ 0.68
HLA-DQB1-201ENST00000374943 GOLPH3Q9H4A6 298 aa19.32■□□□□ 0.68
HLA-DQB1-201ENST00000374943 ACP6Q9NPH0 428 aa19.32■□□□□ 0.68
HLA-DQB1-201ENST00000374943 EHD2Q9NZN4 543 aa19.32■□□□□ 0.68
HLA-DQB1-201ENST00000374943 AMFRQ9UKV5 643 aa19.32■□□□□ 0.68
HLA-DQB1-201ENST00000374943 COG5Q9UP83 839 aa19.32■□□□□ 0.68
HLA-DQB1-201ENST00000374943 KCNK3O14649 394 aa19.31■□□□□ 0.68
HLA-DQB1-201ENST00000374943 ADCY6O43306 1168 aa19.31■□□□□ 0.68
HLA-DQB1-201ENST00000374943 B4GALT4O60513 344 aa19.31■□□□□ 0.68
HLA-DQB1-201ENST00000374943 PHACTR2O75167 634 aa19.31■□□□□ 0.68
HLA-DQB1-201ENST00000374943 TBC1D8O95759 1140 aa19.31■□□□□ 0.68
HLA-DQB1-201ENST00000374943 TNFAIP2Q03169 654 aa19.31■□□□□ 0.68
HLA-DQB1-201ENST00000374943 GRIK4Q16099 956 aa19.31■□□□□ 0.68
HLA-DQB1-201ENST00000374943 DUOXA2Q1HG44 320 aa19.31■□□□□ 0.68
HLA-DQB1-201ENST00000374943 LONRF2Q1L5Z9 754 aa19.31■□□□□ 0.68
HLA-DQB1-201ENST00000374943 CLEC16AQ2KHT3 1053 aa19.31■□□□□ 0.68
HLA-DQB1-201ENST00000374943 BEND6Q5SZJ8 279 aaPredicted RBP19.31■□□□□ 0.68
HLA-DQB1-201ENST00000374943 EEF1DP3Q658K8 133 aa19.31■□□□□ 0.68
HLA-DQB1-201ENST00000374943 SPOPLQ6IQ16 392 aa19.31■□□□□ 0.68
HLA-DQB1-201ENST00000374943 UBR7Q8N806 425 aa19.31■□□□□ 0.68
HLA-DQB1-201ENST00000374943 ELMO3Q96BJ8 720 aa19.31■□□□□ 0.68
HLA-DQB1-201ENST00000374943 MS4A14Q96JA4 679 aa19.31■□□□□ 0.68
HLA-DQB1-201ENST00000374943 IMPG2Q9BZV3 1241 aa19.31■□□□□ 0.68
HLA-DQB1-201ENST00000374943 GTF3C4Q9UKN8 822 aa19.31■□□□□ 0.68
HLA-DQB1-201ENST00000374943 A0A087WZ62 844 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 A6NJR5 290 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 ZEB2O60315 1214 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 IL18RAPO95256 599 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 CYP1A2P05177 515 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 IQCF3P0C7M6 154 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 MCF2P10911 925 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 GLE1Q53GS7 698 aaKnown RBP19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 MARCH8Q5T0T0 291 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 ACAD10Q6JQN1 1059 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms