RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 SCYL3Q8IZE3 742 aa11.23□□□□□ -0.61
PGK1-201ENST00000373316 THEM5Q8N1Q8 247 aa11.23□□□□□ -0.61
PGK1-201ENST00000373316 CMTM5Q96DZ9 223 aa11.23□□□□□ -0.61
PGK1-201ENST00000373316 DTNBP1Q96EV8 351 aa11.23□□□□□ -0.61
PGK1-201ENST00000373316 HEXIM2Q96MH2 286 aaKnown RBP11.23□□□□□ -0.61
PGK1-201ENST00000373316 GTF3C4Q9UKN8 822 aa11.23□□□□□ -0.61
PGK1-201ENST00000373316 RAB21Q9UL25 225 aa11.23□□□□□ -0.61
PGK1-201ENST00000373316 PCDHB2Q9Y5E7 798 aa11.23□□□□□ -0.61
PGK1-201ENST00000373316 IFNAR2P48551 515 aa11.23□□□□□ -0.61
PGK1-201ENST00000373316 RRP1BQ14684 758 aaKnown RBP11.23□□□□□ -0.61
PGK1-201ENST00000373316 KLHDC7AQ5VTJ3 777 aa11.23□□□□□ -0.61
PGK1-201ENST00000373316 CYP4F22Q6NT55 531 aa11.23□□□□□ -0.61
PGK1-201ENST00000373316 TRIM59Q8IWR1 403 aa11.23□□□□□ -0.61
PGK1-201ENST00000373316 FAM151AQ8WW52 585 aa11.23□□□□□ -0.61
PGK1-201ENST00000373316 SENP7Q9BQF6 1050 aa11.23□□□□□ -0.61
PGK1-201ENST00000373316 KIAA1257Q9ULG3 409 aa11.23□□□□□ -0.61
PGK1-201ENST00000373316 CYTH3O43739 400 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 TDP2O95551 362 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 GSTA2P09210 222 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 SGSM1Q2NKQ1 1148 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 NXNQ6DKJ4 435 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 ZNF449Q6P9G9 518 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 RAD9BQ6WBX8 426 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 TMC2Q8TDI7 906 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 STAMBPL1Q96FJ0 436 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 GMCL1Q96IK5 515 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 PAGR1Q9BTK6 254 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 TMEM39BQ9GZU3 492 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 FAM198AQ9UFP1 575 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 FBXL5Q9UKA1 691 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 O00370 1275 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 SH3BP5O60239 455 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 H2AFYO75367 372 aaKnown RBP11.22□□□□□ -0.61
PGK1-201ENST00000373316 CYP2C8P10632 490 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 ACADSBP45954 432 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 PDCLQ13371 301 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 SNX1Q13596 522 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 PRKG1Q13976 671 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 USP49Q70CQ1 688 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 SAMD7Q7Z3H4 446 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 RNF146Q9NTX7 359 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 PIM2Q9P1W9 311 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 SLC9A2Q9UBY0 812 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 MAD2L2Q9UI95 211 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.22□□□□□ -0.61
PGK1-201ENST00000373316 AFG3L2Q9Y4W6 797 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 EMSYQ7Z589 1322 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 IGSF9BQ9UPX0 1349 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 FAM107AO95990 144 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 CACNB1Q02641 598 aaPredicted RBP11.22□□□□□ -0.61
PGK1-201ENST00000373316 P3H1Q32P28 736 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 BBS9Q3SYG4 887 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 RAPH1Q70E73 1250 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 ADAT2Q7Z6V5 191 aaKnown RBP11.22□□□□□ -0.61
PGK1-201ENST00000373316 CHST13Q8NET6 341 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 CALN1Q9BXU9 219 aa11.22□□□□□ -0.61
PGK1-201ENST00000373316 AGO2Q9UKV8 859 aaKnown RBP11.22□□□□□ -0.61
PGK1-201ENST00000373316 MYMKA6NI61 221 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 ZMYND10O75800 440 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 BRAFP15056 766 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 FXR1P51114 621 aaKnown RBP eCLIP11.21□□□□□ -0.611e-6■■□□□ 13.1
PGK1-201ENST00000373316 TBX2Q13207 712 aaPredicted RBP11.21□□□□□ -0.61
PGK1-201ENST00000373316 PTPN21Q16825 1174 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 UGP2Q16851 508 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 CENPPQ6IPU0 288 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 ZNF746Q6NUN9 644 aaPredicted RBP11.21□□□□□ -0.61
PGK1-201ENST00000373316 ELMSAN1Q6PJG2 1045 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 WHRNQ9P202 907 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 CNOT7Q9UIV1 285 aaKnown RBP11.21□□□□□ -0.61
PGK1-201ENST00000373316 BAG2O95816 211 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 ART3Q13508 389 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 C11orf63Q6NUN7 778 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 EP400NLQ6ZTU2 488 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 RSRC2Q7L4I2 434 aaKnown RBP11.21□□□□□ -0.61
PGK1-201ENST00000373316 FASTKD5Q7L8L6 764 aaKnown RBP11.21□□□□□ -0.61
PGK1-201ENST00000373316 EFHBQ8N7U6 833 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 ELAC2Q9BQ52 826 aaKnown RBP11.21□□□□□ -0.61
PGK1-201ENST00000373316 POLR3FQ9H1D9 316 aaPredicted RBP11.21□□□□□ -0.61
PGK1-201ENST00000373316 TMEM260Q9NX78 707 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 HSPBP1Q9NZL4 362 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 NUB1Q9Y5A7 615 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 CCDC88AQ3V6T2 1871 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 POTEFA5A3E0 1075 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 GOLGA8JA6NMD2 632 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 BTNL10A8MVZ5 291 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 GYG2O15488 501 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 PJA2O43164 708 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 POTEIP0CG38 1075 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 CASP1P29466 404 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 YWHABP31946 246 aaKnown RBP11.21□□□□□ -0.61
PGK1-201ENST00000373316 ARFIP2P53365 341 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 MCL1Q07820 350 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 RASIP1Q5U651 963 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 IZUMO3Q5VZ72 239 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 POTEGQ6S5H5 508 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 POTEEQ6S8J3 1075 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 SPATA21Q7Z572 469 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 DPP9Q86TI2 863 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 ACAP3Q96P50 834 aa11.21□□□□□ -0.61
PGK1-201ENST00000373316 MXRA8Q9BRK3 442 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms