RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.37□□□□□ -0.11
CSTF2-201ENST00000372972 CGRRF1Q99675 332 aa14.37□□□□□ -0.11
CSTF2-201ENST00000372972 JPH2Q9BR39 696 aaPredicted RBP14.37□□□□□ -0.11
CSTF2-201ENST00000372972 MRPL4Q9BYD3 311 aaKnown RBP14.37□□□□□ -0.11
CSTF2-201ENST00000372972 PLEKHA4Q9H4M7 779 aa14.37□□□□□ -0.11
CSTF2-201ENST00000372972 SLITRK6Q9H5Y7 841 aa14.37□□□□□ -0.11
CSTF2-201ENST00000372972 PCDHB2Q9Y5E7 798 aa14.37□□□□□ -0.11
CSTF2-201ENST00000372972 PTPRJQ12913 1337 aa14.37□□□□□ -0.11
CSTF2-201ENST00000372972 CNTNAP2Q9UHC6 1331 aa14.37□□□□□ -0.11
CSTF2-201ENST00000372972 MCM3APO60318 1980 aa14.37□□□□□ -0.11
CSTF2-201ENST00000372972 IGKV6-21A0A0C4DH24 114 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 ZBTB42B2RXF5 422 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 MSCO60682 206 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 TOM1L1O75674 476 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 SRGAP2CP0DJJ0 459 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 TXNP10599 105 aaKnown RBP14.36□□□□□ -0.11
CSTF2-201ENST00000372972 ITGA4P13612 1032 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 GGCXP38435 758 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 MKRN4PQ13434 485 aaPredicted RBP14.36□□□□□ -0.11
CSTF2-201ENST00000372972 MESDQ14696 234 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 CLEC16AQ2KHT3 1053 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 CDCA2Q69YH5 1023 aaPredicted RBP14.36□□□□□ -0.11
CSTF2-201ENST00000372972 MAATS1Q7Z4T9 603 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 TRIM50Q86XT4 487 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 EXOC4Q96A65 974 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 ZNF653Q96CK0 615 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 RNPC3Q96LT9 517 aaKnown RBP14.36□□□□□ -0.11
CSTF2-201ENST00000372972 CCDC113Q9H0I3 377 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 DDX47Q9H0S4 455 aaKnown RBP14.36□□□□□ -0.11
CSTF2-201ENST00000372972 SMARCAD1Q9H4L7 1026 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 UVRAGQ9P2Y5 699 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 TRPM7Q96QT4 1865 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 ASB14A6NK59 587 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 AGPSO00116 658 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 PHACTR2O75167 634 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 CLSTN1O94985 981 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 ADORA2AP29274 412 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 AP3M2P53677 418 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 TTLL4Q14679 1199 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 PPP2R5EQ16537 467 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 ZNF792Q3KQV3 632 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 ALS2CLQ60I27 953 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 ZBTB8OSQ8IWT0 167 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 ZNF564Q8TBZ8 553 aaPredicted RBP14.36□□□□□ -0.11
CSTF2-201ENST00000372972 WHAMMQ8TF30 809 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 ALG3Q92685 438 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 PARK7Q99497 189 aaKnown RBP14.36□□□□□ -0.11
CSTF2-201ENST00000372972 TCHPQ9BT92 498 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 NUP85Q9BW27 656 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 WNT8AQ9H1J5 351 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 C2orf40Q9H1Z8 148 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.36□□□□□ -0.11
CSTF2-201ENST00000372972 CHORDC1Q9UHD1 332 aaPredicted RBP14.36□□□□□ -0.11
CSTF2-201ENST00000372972 TRPC6Q9Y210 931 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 PLXNB2O15031 1838 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 SIP14410 1827 aa14.36□□□□□ -0.11
CSTF2-201ENST00000372972 TMEM110-MUSTN1A8MSY1 372 aa14.35□□□□□ -0.11
CSTF2-201ENST00000372972 ATMINO43313 823 aaPredicted RBP14.35□□□□□ -0.11
CSTF2-201ENST00000372972 HARSP12081 509 aaKnown RBP14.35□□□□□ -0.11
CSTF2-201ENST00000372972 COMTP21964 271 aa14.35□□□□□ -0.11
CSTF2-201ENST00000372972 CYP2C19P33261 490 aa14.35□□□□□ -0.11
CSTF2-201ENST00000372972 CUL1Q13616 776 aa14.35□□□□□ -0.11
CSTF2-201ENST00000372972 CUL2Q13617 745 aa14.35□□□□□ -0.11
CSTF2-201ENST00000372972 MAPK6Q16659 721 aa14.35□□□□□ -0.11
CSTF2-201ENST00000372972 LRRC71Q8N4P6 559 aa14.35□□□□□ -0.11
CSTF2-201ENST00000372972 RNF149Q8NC42 400 aa14.35□□□□□ -0.11
CSTF2-201ENST00000372972 COPS5Q92905 334 aa14.35□□□□□ -0.11
CSTF2-201ENST00000372972 ACO2Q99798 780 aaKnown RBP14.35□□□□□ -0.11
CSTF2-201ENST00000372972 PSD3Q9NYI0 1048 aa14.35□□□□□ -0.11
CSTF2-201ENST00000372972 TTLL13PA6NNM8 815 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 BHMG1C9JSJ3 638 aaPredicted RBP14.34□□□□□ -0.11
CSTF2-201ENST00000372972 HBP1O60381 514 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 RNF40O75150 1001 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 FAM153BP0C7A2 387 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 UNGP13051 313 aaPredicted RBP14.34□□□□□ -0.11
CSTF2-201ENST00000372972 TBXAS1P24557 533 aaPredicted RBP14.34□□□□□ -0.11
CSTF2-201ENST00000372972 GRM1Q13255 1194 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 TRADDQ15628 312 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 FAM153CQ494X1 144 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 SEZ6Q53EL9 994 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 SPOPLQ6IQ16 392 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 ARMCX2Q7L311 632 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 BRSK2Q8IWQ3 736 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 OR5B17Q8NGF7 314 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 ZSWIM1Q9BR11 485 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 PDGFCQ9NRA1 345 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 CNOT8Q9UFF9 292 aaKnown RBP14.34□□□□□ -0.11
CSTF2-201ENST00000372972 AMACRQ9UHK6 382 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 FAM153AQ9UHL3 310 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 GOLGA6L10A0A0M3HER8 536 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 OGTO15294 1046 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 STRNO43815 780 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 FAM189A1O60320 539 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 HSF2BPO75031 334 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 CALCAP01258 141 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 PRKCBP05771 671 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 ACO1P21399 889 aaKnown RBP14.34□□□□□ -0.11
CSTF2-201ENST00000372972 PEX5P50542 639 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 ZNF157P51786 506 aaPredicted RBP14.34□□□□□ -0.11
CSTF2-201ENST00000372972 ZNF211Q13398 564 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms