RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 VEZTQ9HBM0 779 aa13.62□□□□□ -0.23
CTPS1-202ENST00000372621 WDR46O15213 610 aaKnown RBP13.61□□□□□ -0.23
CTPS1-202ENST00000372621 ZC3H11AO75152 810 aaKnown RBP eCLIP13.61□□□□□ -0.23
CTPS1-202ENST00000372621 ATP2C2O75185 946 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 TCEA3O75764 348 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 TTC4O95801 387 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 SCP2P22307 547 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 SLC1A1P43005 524 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 KRT76Q01546 638 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 SNX1Q13596 522 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 ATG4AQ8WYN0 398 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 DCLK3Q9C098 648 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 C17orf75Q9HAS0 396 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 RAVER2Q9HCJ3 691 aaKnown RBP13.61□□□□□ -0.23
CTPS1-202ENST00000372621 KMT5AQ9NQR1 393 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 SAMD15Q9P1V8 674 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 ADGRA3Q8IWK6 1321 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 PARP14Q460N5 1801 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 KIAA1217Q5T5P2 1943 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 SNX3O60493 162 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 RAD17O75943 681 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 STBD1O95210 358 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 ACSL3O95573 720 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 MAN1A1P33908 653 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 PTP4A2Q12974 167 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 KLF1Q13351 362 aaPredicted RBP13.61□□□□□ -0.23
CTPS1-202ENST00000372621 SNCBQ16143 134 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 WLSQ5T9L3 541 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 TRMT1LQ7Z2T5 733 aaKnown RBP13.61□□□□□ -0.23
CTPS1-202ENST00000372621 CPXCR1Q8N123 301 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 MTMR14Q8NCE2 650 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 MAIP1Q8WWC4 291 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 FAM81BQ96LP2 452 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 PDCD2LQ9BRP1 358 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 PI4K2AQ9BTU6 479 aa13.61□□□□□ -0.23
CTPS1-202ENST00000372621 TPX2Q9ULW0 747 aaKnown RBP13.61□□□□□ -0.23
CTPS1-202ENST00000372621 CYP1A1P04798 512 aaPredicted RBP13.6□□□□□ -0.23
CTPS1-202ENST00000372621 CREB1P16220 341 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 IFNAR2P48551 515 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 CLDN10P78369 228 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.6□□□□□ -0.23
CTPS1-202ENST00000372621 TRPM8Q7Z2W7 1104 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 CCDC50Q8IVM0 306 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 ZNF516Q92618 1163 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 ARHGEF2Q92974 986 aaKnown RBP13.6□□□□□ -0.23
CTPS1-202ENST00000372621 NCAPGQ9BPX3 1015 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 PXMP2Q9NR77 195 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 HOMER3Q9NSC5 361 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 ZBTB12Q9Y330 459 aaPredicted RBP13.6□□□□□ -0.23
CTPS1-202ENST00000372621 C21orf2O43822 256 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 VIMP08670 466 aaKnown RBP13.6□□□□□ -0.23
CTPS1-202ENST00000372621 MYBL1P10243 752 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 RRM1P23921 792 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 ITGA8P53708 1063 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 PREPLQ4J6C6 727 aaPredicted RBP13.6□□□□□ -0.23
CTPS1-202ENST00000372621 ZNF677Q86XU0 584 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 GPD1LQ8N335 351 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 OGFOD1Q8N543 542 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 POMGNT1Q8WZA1 660 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 LPAR1Q92633 364 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 SENP7Q9BQF6 1050 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 PDLIM7Q9NR12 457 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 HOMER2Q9NSB8 354 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 ASIC3Q9UHC3 531 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 R3HDM2Q9Y2K5 976 aaKnown RBP13.6□□□□□ -0.23
CTPS1-202ENST00000372621 UMODL1Q5DID0 1318 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 TMEM120BA0PK00 339 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 SORBS3O60504 671 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 KRT5P13647 590 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 GARTP22102 1010 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 SOX10P56693 466 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 ELF3P78545 371 aaPredicted RBP13.6□□□□□ -0.23
CTPS1-202ENST00000372621 CAV1Q03135 178 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 CENPCQ03188 943 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 TAS1R3Q7RTX0 852 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 USP37Q86T82 979 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 RDM1Q8NG50 284 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 TRAIPQ9BWF2 469 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 MOV10L1Q9BXT6 1211 aaKnown RBP13.6□□□□□ -0.23
CTPS1-202ENST00000372621 NSRP1Q9H0G5 558 aaKnown RBP13.6□□□□□ -0.23
CTPS1-202ENST00000372621 CCDC113Q9H0I3 377 aa13.6□□□□□ -0.23
CTPS1-202ENST00000372621 ZNF862O60290 1169 aa13.59□□□□□ -0.23
CTPS1-202ENST00000372621 MYCLP12524 364 aaPredicted RBP13.59□□□□□ -0.23
CTPS1-202ENST00000372621 MON1BQ7L1V2 547 aa13.59□□□□□ -0.23
CTPS1-202ENST00000372621 ATL2Q8NHH9 583 aa13.59□□□□□ -0.23
CTPS1-202ENST00000372621 GRK7Q8WTQ7 553 aa13.59□□□□□ -0.23
CTPS1-202ENST00000372621 CPA5Q8WXQ8 436 aa13.59□□□□□ -0.23
CTPS1-202ENST00000372621 ZBED3Q96IU2 234 aaPredicted RBP13.59□□□□□ -0.23
CTPS1-202ENST00000372621 RMDN3Q96TC7 470 aa13.59□□□□□ -0.23
CTPS1-202ENST00000372621 CTNNAL1Q9UBT7 734 aa13.59□□□□□ -0.23
CTPS1-202ENST00000372621 PCDHB2Q9Y5E7 798 aa13.59□□□□□ -0.23
CTPS1-202ENST00000372621 APBA3O96018 575 aa13.59□□□□□ -0.23
CTPS1-202ENST00000372621 DGKZQ13574 1117 aa13.59□□□□□ -0.23
CTPS1-202ENST00000372621 BRDTQ58F21 947 aaPredicted RBP13.59□□□□□ -0.23
CTPS1-202ENST00000372621 LLGL2Q6P1M3 1020 aa13.59□□□□□ -0.23
CTPS1-202ENST00000372621 OTUD6AQ7L8S5 288 aa13.59□□□□□ -0.23
CTPS1-202ENST00000372621 RELL1Q8IUW5 271 aa13.59□□□□□ -0.23
CTPS1-202ENST00000372621 PLCD3Q8N3E9 789 aa13.59□□□□□ -0.23
CTPS1-202ENST00000372621 FAM84AQ96KN4 292 aa13.59□□□□□ -0.23
CTPS1-202ENST00000372621 ABCF3Q9NUQ8 709 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms