RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 CACTINQ8WUQ7 758 aaKnown RBP17.15■□□□□ 0.34
TMEM53-204ENST00000372243 ZNF516Q92618 1163 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 LPPQ93052 612 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 MRFAP1L1Q96HT8 127 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 TMEM117Q9H0C3 514 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 PCDHB7Q9Y5E2 793 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 PTPRJQ12913 1337 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 TRIP11Q15643 1979 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 SMIM28A0A1B0GU29 152 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 ARL5CA6NH57 179 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 PES1O00541 588 aaKnown RBP17.14■□□□□ 0.33
TMEM53-204ENST00000372243 HOXA2O43364 376 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 XPOTO43592 962 aaKnown RBP17.14■□□□□ 0.33
TMEM53-204ENST00000372243 FGBP02675 491 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 C4BPAP04003 597 aaKnown RBP17.14■□□□□ 0.33
TMEM53-204ENST00000372243 ACRP10323 421 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 SYN1P17600 705 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 GCLMP48507 274 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 UBXN1Q04323 297 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 CETN1Q12798 172 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 TMEM132DQ14C87 1099 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 CBWD6Q4V339 395 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 CBWD3Q5JTY5 395 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 CBWD5Q5RIA9 395 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 SV2AQ7L0J3 742 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 C16orf59Q7L2K0 433 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 RNF169Q8NCN4 708 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 GSTCDQ8NEC7 633 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 ANKRD36BP1Q96IX9 119 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 ZMAT2Q96NC0 199 aaKnown RBP17.14■□□□□ 0.33
TMEM53-204ENST00000372243 ERGIC2Q96RQ1 377 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 KLK14Q9P0G3 267 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 ZMYND8Q9ULU4 1186 aaPredicted RBP17.14■□□□□ 0.33
TMEM53-204ENST00000372243 COQ4Q9Y3A0 265 aa17.14■□□□□ 0.33
TMEM53-204ENST00000372243 A0A1W2PQC6 194 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 TEX33O43247 280 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 OFD1O75665 1012 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 TNNC2P02585 160 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 NFICP08651 508 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 TMEM191BP0C7N4 346 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 CYP3A5P20815 502 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 MLH1P40692 756 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 ZNF75DP51815 510 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 MYL7Q01449 175 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 GLB1LQ6UWU2 654 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 OR5B17Q8NGF7 314 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 KIF12Q96FN5 646 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 ZFP42Q96MM3 310 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 RPS6KC1Q96S38 1066 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 GAD1Q99259 594 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 LBHD1Q9BQE6 289 aaPredicted RBP17.13■□□□□ 0.33
TMEM53-204ENST00000372243 CXCL16Q9H2A7 254 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 SLC38A7Q9NVC3 462 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 LRFN2Q9ULH4 789 aa17.13■□□□□ 0.33
TMEM53-204ENST00000372243 UBQLN1Q9UMX0 589 aaKnown RBP17.13■□□□□ 0.33
TMEM53-204ENST00000372243 PTGESO14684 152 aa17.12■□□□□ 0.33
TMEM53-204ENST00000372243 AMHP03971 560 aa17.12■□□□□ 0.33
TMEM53-204ENST00000372243 PBX1P40424 430 aa17.12■□□□□ 0.33
TMEM53-204ENST00000372243 TFAMQ00059 246 aaKnown RBP17.12■□□□□ 0.33
TMEM53-204ENST00000372243 LMBRD2Q68DH5 695 aaPredicted RBP17.12■□□□□ 0.33
TMEM53-204ENST00000372243 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.12■□□□□ 0.33
TMEM53-204ENST00000372243 GBP6Q6ZN66 633 aa17.12■□□□□ 0.33
TMEM53-204ENST00000372243 ZNF365Q70YC5 407 aa17.12■□□□□ 0.33
TMEM53-204ENST00000372243 TRAPPC11Q7Z392 1133 aa17.12■□□□□ 0.33
TMEM53-204ENST00000372243 TOP1MTQ969P6 601 aa17.12■□□□□ 0.33
TMEM53-204ENST00000372243 PPP1R10Q96QC0 940 aaKnown RBP17.12■□□□□ 0.33
TMEM53-204ENST00000372243 MTMR12Q9C0I1 747 aa17.12■□□□□ 0.33
TMEM53-204ENST00000372243 MMRN2Q9H8L6 949 aa17.12■□□□□ 0.33
TMEM53-204ENST00000372243 RNF19AQ9NV58 838 aa17.12■□□□□ 0.33
TMEM53-204ENST00000372243 ADCY5O95622 1261 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 THP07101 528 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 WDR5P61964 334 aaKnown RBP17.11■□□□□ 0.33
TMEM53-204ENST00000372243 EPC2Q52LR7 807 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 CLLU1OSQ5K130 101 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 TMEM240Q5SV17 173 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 TDRD10Q5VZ19 366 aaKnown RBP17.11■□□□□ 0.33
TMEM53-204ENST00000372243 FBXL13Q8NEE6 735 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 BEST2Q8NFU1 509 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 KANSL3Q9P2N6 904 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 ITGA11Q9UKX5 1188 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 TULP1O00294 542 aaPredicted RBP17.11■□□□□ 0.33
TMEM53-204ENST00000372243 KCNJ6P48051 423 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 EPHB4P54760 987 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 GRIK3Q13003 919 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 NAB2Q15742 525 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 EXOC3L4Q17RC7 722 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 GLRA4Q5JXX5 417 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 OTOP2Q7RTS6 562 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 C1orf127Q8N9H9 656 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 HELQQ8TDG4 1101 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.11■□□□□ 0.33
TMEM53-204ENST00000372243 MIOSQ9NXC5 875 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 DPP3Q9NY33 737 aa17.11■□□□□ 0.33
TMEM53-204ENST00000372243 TDRD15B5MCY1 1934 aaKnown RBP17.1■□□□□ 0.33
TMEM53-204ENST00000372243 ITIH6Q6UXX5 1313 aa17.1■□□□□ 0.33
TMEM53-204ENST00000372243 VNN1O95497 513 aa17.1■□□□□ 0.33
TMEM53-204ENST00000372243 FGFR1P11362 822 aa17.1■□□□□ 0.33
TMEM53-204ENST00000372243 IBSPP21815 317 aaPredicted RBP17.1■□□□□ 0.33
TMEM53-204ENST00000372243 CDC25BP30305 580 aa17.1■□□□□ 0.33
TMEM53-204ENST00000372243 SCNN1GP51170 649 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms