RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 ERCC5P28715 1186 aaPredicted RBP17.72■□□□□ 0.43
TMEM53-203ENST00000372242 TAP1Q03518 808 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 SOX4Q06945 474 aaPredicted RBP17.72■□□□□ 0.43
TMEM53-203ENST00000372242 ANO6Q4KMQ2 910 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 LMBRD2Q68DH5 695 aaPredicted RBP17.72■□□□□ 0.43
TMEM53-203ENST00000372242 ZC3H3Q8IXZ2 948 aaKnown RBP17.72■□□□□ 0.43
TMEM53-203ENST00000372242 FAM193BQ96PV7 902 aaPredicted RBP17.72■□□□□ 0.43
TMEM53-203ENST00000372242 POP1Q99575 1024 aaKnown RBP17.72■□□□□ 0.43
TMEM53-203ENST00000372242 ASB7Q9H672 318 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 SLC28A3Q9HAS3 691 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 DLATP10515 647 aaKnown RBP17.71■□□□□ 0.43
TMEM53-203ENST00000372242 PSMC2P35998 433 aaKnown RBP17.71■□□□□ 0.43
TMEM53-203ENST00000372242 POU5F1Q01860 360 aaKnown RBP17.71■□□□□ 0.43
TMEM53-203ENST00000372242 DSC1Q08554 894 aa17.71■□□□□ 0.43
TMEM53-203ENST00000372242 EFCAB13Q8IY85 973 aa17.71■□□□□ 0.43
TMEM53-203ENST00000372242 FAM186BQ8IYM0 893 aa17.71■□□□□ 0.43
TMEM53-203ENST00000372242 PLEKHO2Q8TD55 490 aa17.71■□□□□ 0.43
TMEM53-203ENST00000372242 RSPH1Q8WYR4 309 aa17.71■□□□□ 0.43
TMEM53-203ENST00000372242 TIFAQ96CG3 184 aa17.71■□□□□ 0.43
TMEM53-203ENST00000372242 MFSD14AQ96MC6 490 aa17.71■□□□□ 0.43
TMEM53-203ENST00000372242 PAAF1Q9BRP4 392 aa17.71■□□□□ 0.43
TMEM53-203ENST00000372242 C17orf80Q9BSJ5 609 aa17.71■□□□□ 0.43
TMEM53-203ENST00000372242 SRRTQ9BXP5 876 aaKnown RBP17.71■□□□□ 0.43
TMEM53-203ENST00000372242 CERS4Q9HA82 394 aa17.71■□□□□ 0.43
TMEM53-203ENST00000372242 TUBGCP4Q9UGJ1 667 aa17.71■□□□□ 0.43
TMEM53-203ENST00000372242 KIAA1671Q9BY89 1806 aa17.71■□□□□ 0.43
TMEM53-203ENST00000372242 PTPRJQ12913 1337 aa17.71■□□□□ 0.43
TMEM53-203ENST00000372242 PDCD11Q14690 1871 aaKnown RBP17.71■□□□□ 0.42
TMEM53-203ENST00000372242 CASTOR2A6NHX0 329 aa17.7■□□□□ 0.42
TMEM53-203ENST00000372242 NT5C1B-RDH14C9J2C7 533 aa17.7■□□□□ 0.42
TMEM53-203ENST00000372242 GUCY2FP51841 1108 aa17.7■□□□□ 0.42
TMEM53-203ENST00000372242 TMEM132DQ14C87 1099 aa17.7■□□□□ 0.42
TMEM53-203ENST00000372242 ZBTB6Q15916 424 aa17.7■□□□□ 0.42
TMEM53-203ENST00000372242 PPP2R2DQ66LE6 453 aa17.7■□□□□ 0.42
TMEM53-203ENST00000372242 FOXR2Q6PJQ5 311 aa17.7■□□□□ 0.42
TMEM53-203ENST00000372242 CD302Q8IX05 232 aa17.7■□□□□ 0.42
TMEM53-203ENST00000372242 COLGALT2Q8IYK4 626 aa17.7■□□□□ 0.42
TMEM53-203ENST00000372242 CLP1Q92989 425 aaKnown RBP17.7■□□□□ 0.42
TMEM53-203ENST00000372242 LRCH3Q96II8 777 aa17.7■□□□□ 0.42
TMEM53-203ENST00000372242 BCAR1P56945 870 aa17.7■□□□□ 0.42
TMEM53-203ENST00000372242 DLG4P78352 724 aa17.7■□□□□ 0.42
TMEM53-203ENST00000372242 TFAMQ00059 246 aaKnown RBP17.7■□□□□ 0.42
TMEM53-203ENST00000372242 TUSC3Q13454 348 aa17.7■□□□□ 0.42
TMEM53-203ENST00000372242 PSMD6Q15008 389 aa17.7■□□□□ 0.42
TMEM53-203ENST00000372242 PARD3BQ8TEW8 1205 aa17.7■□□□□ 0.42
TMEM53-203ENST00000372242 FNBP1Q96RU3 617 aa17.7■□□□□ 0.42
TMEM53-203ENST00000372242 F8W810 466 aa17.69■□□□□ 0.42
TMEM53-203ENST00000372242 EPB41P11171 864 aaKnown RBP17.69■□□□□ 0.42
TMEM53-203ENST00000372242 OR1G1P47890 313 aa17.69■□□□□ 0.42
TMEM53-203ENST00000372242 SLC11A1P49279 550 aa17.69■□□□□ 0.42
TMEM53-203ENST00000372242 HSP90AA2PQ14568 343 aaPredicted RBP17.69■□□□□ 0.42
TMEM53-203ENST00000372242 TPD52L1Q16890 204 aaPredicted RBP17.69■□□□□ 0.42
TMEM53-203ENST00000372242 CT47A1Q5JQC4 288 aaPredicted RBP17.69■□□□□ 0.42
TMEM53-203ENST00000372242 HABP4Q5JVS0 413 aaKnown RBP17.69■□□□□ 0.42
TMEM53-203ENST00000372242 KCNT2Q6UVM3 1135 aa17.69■□□□□ 0.42
TMEM53-203ENST00000372242 COLGALT1Q8NBJ5 622 aa17.69■□□□□ 0.42
TMEM53-203ENST00000372242 OR5B17Q8NGF7 314 aa17.69■□□□□ 0.42
TMEM53-203ENST00000372242 CEP63Q96MT8 703 aa17.69■□□□□ 0.42
TMEM53-203ENST00000372242 SLC38A7Q9NVC3 462 aa17.69■□□□□ 0.42
TMEM53-203ENST00000372242 PRG3Q9Y2Y8 225 aaPredicted RBP17.69■□□□□ 0.42
TMEM53-203ENST00000372242 C2CD2Q9Y426 696 aa17.69■□□□□ 0.42
TMEM53-203ENST00000372242 MAPK13O15264 365 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 GALTP07902 379 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 TNNI1P19237 187 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 IGFBP6P24592 240 aaPredicted RBP17.68■□□□□ 0.42
TMEM53-203ENST00000372242 CTNNB1P35222 781 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 ALDH7A1P49419 539 aaKnown RBP17.68■□□□□ 0.42
TMEM53-203ENST00000372242 CLCNKBP51801 687 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 HSP90AA4PQ58FG1 418 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 SCARA3Q6AZY7 606 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 FILIP1Q7Z7B0 1213 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 TMEM173Q86WV6 379 aaPredicted RBP17.68■□□□□ 0.42
TMEM53-203ENST00000372242 BORCS6Q96GS4 357 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 MKNK1Q9BUB5 465 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 MTMR12Q9C0I1 747 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 UBQLN1Q9UMX0 589 aaKnown RBP17.68■□□□□ 0.42
TMEM53-203ENST00000372242 DERAQ9Y315 318 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 NLRC5Q86WI3 1866 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 LRRIQ3A6PVS8 624 aaPredicted RBP17.68■□□□□ 0.42
TMEM53-203ENST00000372242 NRP1O14786 923 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 SLC16A3O15427 465 aaKnown RBP17.68■□□□□ 0.42
TMEM53-203ENST00000372242 ALDH2P05091 517 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 TRIM49P0CI25 452 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 TRIM49CP0CI26 452 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 LAG3P18627 525 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 BMPR1AP36894 532 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 VAMP7P51809 220 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 BFSP1Q12934 665 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 SPATA1Q5VX52 437 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 INTS8Q75QN2 995 aaKnown RBP17.68■□□□□ 0.42
TMEM53-203ENST00000372242 CREBRFQ8IUR6 639 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 ZNF558Q96NG5 402 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 TGS1Q96RS0 853 aaKnown RBP17.68■□□□□ 0.42
TMEM53-203ENST00000372242 CDH23Q9H251 3354 aa17.68■□□□□ 0.42
TMEM53-203ENST00000372242 KRT13P13646 458 aa17.67■□□□□ 0.42
TMEM53-203ENST00000372242 SURF1Q15526 300 aa17.67■□□□□ 0.42
TMEM53-203ENST00000372242 CCDC40Q4G0X9 1142 aa17.67■□□□□ 0.42
TMEM53-203ENST00000372242 EPC2Q52LR7 807 aa17.67■□□□□ 0.42
TMEM53-203ENST00000372242 C1orf220Q5T0J3 134 aa17.67■□□□□ 0.42
TMEM53-203ENST00000372242 IRF2BP1Q8IU81 584 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms