RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 PLCG1P19174 1290 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 NUP107P57740 925 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 TMPRSS15P98073 1019 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 NR1H3Q13133 447 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 ARMCX4Q5H9R4 360 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 RABGAP1LQ5R372 815 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 RSBN1Q5VWQ0 802 aaPredicted RBP14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 BBS5Q8N3I7 341 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 FAM133AQ8N9E0 248 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 C17orf50Q8WW18 174 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 KATNAL1Q9BW62 490 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 BHMT2Q9H2M3 363 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 PLAAQ9Y263 795 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 PTPN21Q16825 1174 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 PBKQ96KB5 322 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 FMO2Q99518 471 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 PIDD1Q9HB75 910 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 ADA2Q9NZK5 511 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 BCORL1Q5H9F3 1711 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 TBC1D4O60343 1298 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 LDHAP00338 332 aaKnown RBP14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 AFPP02771 609 aaKnown RBP14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 YWHAHQ04917 246 aaPredicted RBP14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 EFTUD2Q15029 972 aaKnown RBP eCLIP14.83□□□□□ -0.042e-9■■■■■ 51.7
RAPGEF1-202ENST00000372190 ZNF658Q5TYW1 1059 aaPredicted RBP14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 C4orf50Q6ZRC1 276 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 PCGF5Q86SE9 256 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 STX12Q86Y82 276 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 PBXIP1Q96AQ6 731 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 OSBPL10Q9BXB5 764 aa14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 GBA2Q9HCG7 927 aaPredicted RBP14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 PAPOLBQ9NRJ5 636 aaKnown RBP14.83□□□□□ -0.04
RAPGEF1-202ENST00000372190 RARBP10826 455 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 CDH2P19022 906 aaPredicted RBP14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 NECTIN1Q15223 517 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 SKA2Q8WVK7 121 aaPredicted RBP14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 OLA1Q9NTK5 396 aaKnown RBP14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 DPYSL4O14531 572 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 SLC25A27O95847 323 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 ATN1P54259 1190 aaPredicted RBP14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 HIC1Q14526 733 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 LVRNQ6Q4G3 990 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 RNF139Q8WU17 664 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 H7C0C1 242 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 ATP5OP48047 213 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 C1orf228Q6PIY5 440 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 EMILIN3Q9NT22 766 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 CDC25AP30304 524 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 KPNB1Q14974 876 aaKnown RBP14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 HEXIM2Q96MH2 286 aaKnown RBP14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 PANX2Q96RD6 677 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 EPAS1Q99814 870 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 TMEM260Q9NX78 707 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 RCOR1Q9UKL0 485 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 PCDHB6Q9Y5E3 794 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 MEGF6O75095 1541 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 DYNC1LI2O43237 492 aaPredicted RBP14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 LCA5LO95447 670 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 ACADSP16219 412 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 SCARA5Q6ZMJ2 495 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 NOP9Q86U38 636 aaKnown RBP14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 LINC00301Q8NCQ3 95 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 PPHLN1Q8NEY8 458 aaKnown RBP14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 SLC8A2Q9UPR5 921 aa14.82□□□□□ -0.04
RAPGEF1-202ENST00000372190 KPNA4O00629 521 aaPredicted RBP14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 ZSCAN9O15535 394 aaPredicted RBP14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 AGGF1Q8N302 714 aaeCLIP14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 STAG2Q8N3U4 1231 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 P2RX5Q93086 422 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 VIPAS39Q9H9C1 493 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 TNS2Q63HR2 1409 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 SFI1A8K8P3 1242 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 EIF3DO15371 548 aaKnown RBP eCLIP14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 TP53BP2Q13625 1128 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 KRT74Q7RTS7 529 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 AGBL1Q96MI9 1066 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 AIFM3Q96NN9 605 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 C2orf40Q9H1Z8 148 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 ATAD3AQ9NVI7 634 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 SLC9A2Q9UBY0 812 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 RWDD2AQ9UIY3 292 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 STX7O15400 261 aaKnown RBP14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 CCDC22O60826 627 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 CLASP2O75122 1294 aaKnown RBP14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 MOCS3O95396 460 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 EIF2S1P05198 315 aaKnown RBP14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 MYL1P05976 194 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 SCP2P22307 547 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 INPP5AQ14642 412 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 ZNF568Q3ZCX4 644 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 OR6B3Q8NGW1 331 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 B3GALT6Q96L58 329 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 FAM20AQ96MK3 541 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 UNC45AQ9H3U1 944 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 CPSF3Q9UKF6 684 aaKnown RBP14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 ITM2BQ9Y287 266 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 USP32Q8NFA0 1604 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 IQGAP1P46940 1657 aa14.81□□□□□ -0.04
RAPGEF1-202ENST00000372190 ARFIP2P53365 341 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms