RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 A0A087X0B3 334 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 TISP43B9A030 160 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 TMEM189-UBE2V1I3L0A0 370 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 FAM189A1O60320 539 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 B3GAT3O94766 335 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 KCNE1P15382 129 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 TKTP29401 623 aaKnown RBP12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 DEKP35659 375 aaKnown RBP12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 LONP1P36776 959 aaKnown RBP12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 UBA7P41226 1012 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 TNFSF9P41273 254 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 VCPP55072 806 aaKnown RBP12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 CEBPZQ03701 1054 aaKnown RBP12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 SPAG1Q07617 926 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 SIGLEC14Q08ET2 396 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 PSMD5Q16401 504 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 C15orf39Q6ZRI6 1047 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 HAUS6Q7Z4H7 955 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 ZDHHC14Q8IZN3 488 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 ST13P5Q8NFI4 369 aaPredicted RBP12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 KCNN1Q92952 543 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 CDK5RAP3Q96JB5 506 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 USP28Q96RU2 1077 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 MYADMQ96S97 322 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 CCSER1Q9C0I3 900 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 CNTN3Q9P232 1028 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 SSX2IPQ9Y2D8 614 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 NR2E1Q9Y466 385 aa12.03□□□□□ -0.48
EXOSC1-202ENST00000370885 DMDP11532 3685 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 TOM1L1O75674 476 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 NMT1P30419 496 aaKnown RBP12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 NTHL1P78549 312 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 MCL1Q07820 350 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 DCLRE1AQ6PJP8 1040 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 POTEHQ6S545 545 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 CLEC17AQ6ZS10 378 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 KCTD17Q8N5Z5 321 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 TDRD5Q8NAT2 981 aaKnown RBP12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 PRSS33Q8NF86 280 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 RSAD2Q8WXG1 361 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 SMG7Q92540 1137 aaKnown RBP12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 PBXIP1Q96AQ6 731 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 DDX27Q96GQ7 796 aaKnown RBP12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 INTS4Q96HW7 963 aaKnown RBP12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 ACAP3Q96P50 834 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 TCHPQ9BT92 498 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 CCDC94Q9BW85 323 aaPredicted RBP12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 WDR6Q9NNW5 1121 aaKnown RBP12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 KCND2Q9NZV8 630 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 ANKFY1Q9P2R3 1169 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 TUBGCP4Q9UGJ1 667 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 FBXW11Q9UKB1 542 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 USTQ9Y2C2 406 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 HCN4Q9Y3Q4 1203 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 ARIH1Q9Y4X5 557 aaPredicted RBP12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 SRPRBQ9Y5M8 271 aaKnown RBP12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 USP34Q70CQ2 3546 aa12.02□□□□□ -0.49
EXOSC1-202ENST00000370885 MYO15AQ9UKN7 3530 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 ANKRD63C9JTQ0 380 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 PODXLO00592 558 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 NRG2O14511 850 aaPredicted RBP12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 SLC26A4O43511 780 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 TBC1D4O60343 1298 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 ZMYND10O75800 440 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 CXCL8P10145 99 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 OR1D2P34982 312 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 GUCY2FP51841 1108 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 NUCB2P80303 420 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 NOLC1Q14978 699 aaKnown RBP eCLIP12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 ZBTB6Q15916 424 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 ZC2HC1CQ53FD0 456 aaPredicted RBP12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 ZPBP2Q6X784 338 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 CCDC149Q6ZUS6 474 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 MYCT1Q8N699 235 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 HDAC7Q8WUI4 952 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 LARP4BQ92615 738 aaKnown RBP12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 CALML4Q96GE6 196 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 RHOBTB2Q9BYZ6 727 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 PRKD2Q9BZL6 878 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 PLEKHA4Q9H4M7 779 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 MTRRQ9UBK8 725 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 ODF2LQ9ULJ1 636 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 TBX20Q9UMR3 447 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 SORCS3Q9UPU3 1222 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 CLUHO75153 1309 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 VPS13AQ96RL7 3174 aa12.01□□□□□ -0.49
EXOSC1-202ENST00000370885 MYH15Q9Y2K3 1946 aa12□□□□□ -0.49
EXOSC1-202ENST00000370885 TTC26A0AVF1 554 aa12□□□□□ -0.49
EXOSC1-202ENST00000370885 MYMKA6NI61 221 aa12□□□□□ -0.49
EXOSC1-202ENST00000370885 SPDYE4A6NLX3 237 aa12□□□□□ -0.49
EXOSC1-202ENST00000370885 PPEF2O14830 753 aa12□□□□□ -0.49
EXOSC1-202ENST00000370885 NARSO43776 548 aaKnown RBP12□□□□□ -0.49
EXOSC1-202ENST00000370885 BMP15O95972 392 aa12□□□□□ -0.49
EXOSC1-202ENST00000370885 C1RP00736 705 aa12□□□□□ -0.49
EXOSC1-202ENST00000370885 PIGRP01833 764 aa12□□□□□ -0.49
EXOSC1-202ENST00000370885 SMTNP53814 917 aa12□□□□□ -0.49
EXOSC1-202ENST00000370885 YARSP54577 528 aaKnown RBP12□□□□□ -0.49
EXOSC1-202ENST00000370885 KCNA1Q09470 495 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms