RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 EPCAMP16422 314 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 MUTP22033 750 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 RPA1P27694 616 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 CLCN6P51797 869 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 FAM187BQ17R55 369 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 CDCA2Q69YH5 1023 aaPredicted RBP16.31■□□□□ 0.2
LMO4-201ENST00000370542 DGLUCYQ7Z3D6 616 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 GPR65Q8IYL9 337 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 GPR161Q8N6U8 529 aaKnown RBP16.31■□□□□ 0.2
LMO4-201ENST00000370542 FBXO18Q8NFZ0 1043 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 KCNG4Q8TDN1 519 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 KLHL5Q96PQ7 755 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 RHOBTB2Q9BYZ6 727 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 GBP3Q9H0R5 595 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 FZD8Q9H461 694 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 CDH22Q9UJ99 828 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 USTQ9Y2C2 406 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 NR2E1Q9Y466 385 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 USP27XA6NNY8 438 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 INO80B-WBP1J3KQ70 363 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 MED24O75448 989 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 YEATS4O95619 227 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 PDGFBP01127 241 aaPredicted RBP16.3■□□□□ 0.2
LMO4-201ENST00000370542 CNPP09543 421 aaKnown RBP16.3■□□□□ 0.2
LMO4-201ENST00000370542 CLCN4P51793 760 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 NLRP12P59046 1061 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 PDE4CQ08493 712 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 SAFBQ15424 915 aaKnown RBP eCLIP16.3■□□□□ 0.2
LMO4-201ENST00000370542 ARHGAP29Q52LW3 1261 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 ADALQ6DHV7 355 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 FRMD5Q7Z6J6 570 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 C4orf32Q8N8J7 132 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 MCPH1Q8NEM0 835 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 CPB2Q96IY4 423 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 RIPOR3Q96MK2 946 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 FAM193BQ96PV7 902 aaPredicted RBP16.3■□□□□ 0.2
LMO4-201ENST00000370542 NACC1Q96RE7 527 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 GAD1Q99259 594 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 HERC2P3Q9BVR0 1158 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 APOL5Q9BWW9 433 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 RXFP1Q9HBX9 757 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 BAHCC1Q9P281 2608 aa16.3■□□□□ 0.2
LMO4-201ENST00000370542 DENND4AQ7Z401 1863 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 CHD6Q8TD26 2715 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 C2CD4DB7Z1M9 353 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 TUBBP07437 444 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 MCM7P33993 719 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 TRAPPC10P48553 1259 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 NAA30Q147X3 362 aaPredicted RBP16.29■□□□□ 0.2
LMO4-201ENST00000370542 KIAA0319Q5VV43 1072 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 E4F1Q66K89 784 aaPredicted RBP16.29■□□□□ 0.2
LMO4-201ENST00000370542 SLC27A1Q6PCB7 646 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 GPR149Q86SP6 731 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 ZDHHC14Q8IZN3 488 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 AOPEPQ8N6M6 819 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 C12orf76Q8N812 135 aaPredicted RBP16.29■□□□□ 0.2
LMO4-201ENST00000370542 FSIP1Q8NA03 581 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 C8orf76Q96K31 380 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 ZFP42Q96MM3 310 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 EMILIN2Q9BXX0 1053 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 UBXN6Q9BZV1 441 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 POLR3FQ9H1D9 316 aaPredicted RBP16.29■□□□□ 0.2
LMO4-201ENST00000370542 CHST7Q9NS84 486 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 ZNF446Q9NWS9 450 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 TRMT1Q9NXH9 659 aaKnown RBP16.29■□□□□ 0.2
LMO4-201ENST00000370542 HES2Q9Y543 173 aa16.29■□□□□ 0.2
LMO4-201ENST00000370542 TDRD15B5MCY1 1934 aaKnown RBP16.28■□□□□ 0.2
LMO4-201ENST00000370542 A0A087WWV3 80 aa16.28■□□□□ 0.2
LMO4-201ENST00000370542 B4GALT5O43286 388 aa16.28■□□□□ 0.2
LMO4-201ENST00000370542 OR52Z1P0C646 297 aa16.28■□□□□ 0.2
LMO4-201ENST00000370542 MLH1P40692 756 aa16.28■□□□□ 0.2
LMO4-201ENST00000370542 GUCY1B3Q02153 619 aa16.28■□□□□ 0.2
LMO4-201ENST00000370542 ERCC6LQ2NKX8 1250 aa16.28■□□□□ 0.2
LMO4-201ENST00000370542 ATAT1Q5SQI0 421 aa16.28■□□□□ 0.2
LMO4-201ENST00000370542 RARS2Q5T160 578 aaKnown RBP16.28■□□□□ 0.2
LMO4-201ENST00000370542 FAM173BQ6P4H8 233 aa16.28■□□□□ 0.2
LMO4-201ENST00000370542 C15orf39Q6ZRI6 1047 aa16.28■□□□□ 0.2
LMO4-201ENST00000370542 TAS1R1Q7RTX1 841 aa16.28■□□□□ 0.2
LMO4-201ENST00000370542 IQUBQ8NA54 791 aa16.28■□□□□ 0.2
LMO4-201ENST00000370542 CMASQ8NFW8 434 aaPredicted RBP16.28■□□□□ 0.2
LMO4-201ENST00000370542 EXOC4Q96A65 974 aa16.28■□□□□ 0.2
LMO4-201ENST00000370542 RPS6KC1Q96S38 1066 aa16.28■□□□□ 0.2
LMO4-201ENST00000370542 NXF3Q9H4D5 531 aaKnown RBP16.28■□□□□ 0.2
LMO4-201ENST00000370542 SFXN1Q9H9B4 322 aa16.28■□□□□ 0.2
LMO4-201ENST00000370542 GPRC5CQ9NQ84 441 aa16.28■□□□□ 0.2
LMO4-201ENST00000370542 MRPL17Q9NRX2 175 aaKnown RBP16.28■□□□□ 0.2
LMO4-201ENST00000370542 PRMT7Q9NVM4 692 aaPredicted RBP16.28■□□□□ 0.2
LMO4-201ENST00000370542 SSX2IPQ9Y2D8 614 aa16.28■□□□□ 0.2
LMO4-201ENST00000370542 CHD8Q9HCK8 2581 aa16.27■□□□□ 0.2
LMO4-201ENST00000370542 USO1O60763 962 aaKnown RBP16.27■□□□□ 0.2
LMO4-201ENST00000370542 IVLP07476 585 aa16.27■□□□□ 0.2
LMO4-201ENST00000370542 CYP11B2P19099 503 aa16.27■□□□□ 0.2
LMO4-201ENST00000370542 PLA2G4AP47712 749 aa16.27■□□□□ 0.2
LMO4-201ENST00000370542 FXR2P51116 673 aaKnown RBP eCLIP16.27■□□□□ 0.2
LMO4-201ENST00000370542 SCNN1GP51170 649 aa16.27■□□□□ 0.2
LMO4-201ENST00000370542 FOSBP53539 338 aa16.27■□□□□ 0.2
LMO4-201ENST00000370542 DSG1Q02413 1049 aa16.27■□□□□ 0.2
LMO4-201ENST00000370542 KANK3Q6NY19 840 aa16.27■□□□□ 0.2
LMO4-201ENST00000370542 SYT10Q6XYQ8 523 aa16.27■□□□□ 0.2
LMO4-201ENST00000370542 BRAPQ7Z569 592 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms