RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 EFCAB13Q8IY85 973 aa18.12■□□□□ 0.49
PHGDH-202ENST00000369409 TMEM40Q8WWA1 233 aa18.12■□□□□ 0.49
PHGDH-202ENST00000369409 DNAH12Q6ZR08 3092 aa18.12■□□□□ 0.49
PHGDH-202ENST00000369409 KRT86O43790 486 aa18.12■□□□□ 0.49
PHGDH-202ENST00000369409 IL18RAPO95256 599 aa18.12■□□□□ 0.49
PHGDH-202ENST00000369409 INHAP05111 366 aa18.12■□□□□ 0.49
PHGDH-202ENST00000369409 CLTAP09496 248 aa18.12■□□□□ 0.49
PHGDH-202ENST00000369409 CCDC172P0C7W6 258 aa18.12■□□□□ 0.49
PHGDH-202ENST00000369409 EIF4BP23588 611 aaKnown RBP18.12■□□□□ 0.49
PHGDH-202ENST00000369409 USP8P40818 1118 aa18.12■□□□□ 0.49
PHGDH-202ENST00000369409 MAGEA1P43355 309 aa18.12■□□□□ 0.49
PHGDH-202ENST00000369409 TFAMQ00059 246 aaKnown RBP18.12■□□□□ 0.49
PHGDH-202ENST00000369409 SPOPLQ6IQ16 392 aa18.12■□□□□ 0.49
PHGDH-202ENST00000369409 CCSAPQ6IQ19 270 aaPredicted RBP18.12■□□□□ 0.49
PHGDH-202ENST00000369409 TAF2Q6P1X5 1199 aa18.12■□□□□ 0.49
PHGDH-202ENST00000369409 ZNF662Q6ZS27 426 aa18.12■□□□□ 0.49
PHGDH-202ENST00000369409 TSKSQ9UJT2 592 aa18.12■□□□□ 0.49
PHGDH-202ENST00000369409 PDCD11Q14690 1871 aaKnown RBP18.11■□□□□ 0.49
PHGDH-202ENST00000369409 TMEM191BP0C7N4 346 aa18.11■□□□□ 0.49
PHGDH-202ENST00000369409 KIF5AQ12840 1032 aa18.11■□□□□ 0.49
PHGDH-202ENST00000369409 NCOA4Q13772 614 aa18.11■□□□□ 0.49
PHGDH-202ENST00000369409 WDR44Q5JSH3 913 aa18.11■□□□□ 0.49
PHGDH-202ENST00000369409 VPS36Q86VN1 386 aa18.11■□□□□ 0.49
PHGDH-202ENST00000369409 SLAIN1Q8ND83 568 aa18.11■□□□□ 0.49
PHGDH-202ENST00000369409 SHC3Q92529 594 aa18.11■□□□□ 0.49
PHGDH-202ENST00000369409 PAXBP1Q9Y5B6 917 aa18.11■□□□□ 0.49
PHGDH-202ENST00000369409 MEFVO15553 781 aaPredicted RBP18.1■□□□□ 0.49
PHGDH-202ENST00000369409 B4GALT4O60513 344 aa18.1■□□□□ 0.49
PHGDH-202ENST00000369409 NPTXRO95502 500 aa18.1■□□□□ 0.49
PHGDH-202ENST00000369409 HOXA11P31270 313 aaPredicted RBP18.1■□□□□ 0.49
PHGDH-202ENST00000369409 GCNT1Q02742 428 aa18.1■□□□□ 0.49
PHGDH-202ENST00000369409 ARHGEF6Q15052 776 aa18.1■□□□□ 0.49
PHGDH-202ENST00000369409 DUOXA2Q1HG44 320 aa18.1■□□□□ 0.49
PHGDH-202ENST00000369409 DCAF4L1Q3SXM0 396 aa18.1■□□□□ 0.49
PHGDH-202ENST00000369409 ZNF569Q5MCW4 686 aa18.1■□□□□ 0.49
PHGDH-202ENST00000369409 SCARA3Q6AZY7 606 aa18.1■□□□□ 0.49
PHGDH-202ENST00000369409 TRAPPC11Q7Z392 1133 aa18.1■□□□□ 0.49
PHGDH-202ENST00000369409 NME8Q8N427 588 aa18.1■□□□□ 0.49
PHGDH-202ENST00000369409 PCSK9Q8NBP7 692 aaKnown RBP18.1■□□□□ 0.49
PHGDH-202ENST00000369409 DHX38Q92620 1227 aaKnown RBP18.1■□□□□ 0.49
PHGDH-202ENST00000369409 ARID3AQ99856 593 aa18.1■□□□□ 0.49
PHGDH-202ENST00000369409 TSGA10Q9BZW7 698 aa18.1■□□□□ 0.49
PHGDH-202ENST00000369409 NFICP08651 508 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 ANXA13P27216 316 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 CRYBB1P53674 252 aaPredicted RBP18.09■□□□□ 0.49
PHGDH-202ENST00000369409 NOP14P78316 857 aaKnown RBP18.09■□□□□ 0.49
PHGDH-202ENST00000369409 NCBP1Q09161 790 aaKnown RBP18.09■□□□□ 0.49
PHGDH-202ENST00000369409 PCBP1Q15365 356 aaKnown RBP eCLIP18.09■□□□□ 0.492e-6■■■□□ 14.6
PHGDH-202ENST00000369409 KYAT1Q16773 422 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 NOTUMQ6P988 496 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 SLC27A1Q6PCB7 646 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 RNF180Q86T96 592 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 SLC35F6Q8N357 371 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 OLIG1Q8TAK6 271 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 LNX1Q8TBB1 728 aaPredicted RBP18.09■□□□□ 0.49
PHGDH-202ENST00000369409 ANKRD36BP1Q96IX9 119 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 APOBEC3GQ9HC16 384 aaKnown RBP18.09■□□□□ 0.49
PHGDH-202ENST00000369409 LUC7LQ9NQ29 371 aaKnown RBP18.09■□□□□ 0.49
PHGDH-202ENST00000369409 DUSP10Q9Y6W6 482 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 MYH10P35580 1976 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 LACTBL1A8MY62 500 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 DDX3XO00571 662 aaKnown RBP eCLIP18.09■□□□□ 0.497e-18■■■□□ 16.8
PHGDH-202ENST00000369409 TNNC2P02585 160 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 CASQ1P31415 396 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 MRPS6P82932 125 aaKnown RBP18.09■□□□□ 0.49
PHGDH-202ENST00000369409 BMS1Q14692 1282 aaKnown RBP18.09■□□□□ 0.49
PHGDH-202ENST00000369409 ENOSF1Q7L5Y1 443 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 FAM71AQ8IYT1 594 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 WNT8BQ93098 351 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 SYT11Q9BT88 431 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 IMPG2Q9BZV3 1241 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 MYO1AQ9UBC5 1043 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 NAGPAQ9UK23 515 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 PIN4Q9Y237 131 aaKnown RBP18.09■□□□□ 0.49
PHGDH-202ENST00000369409 PTCH2Q9Y6C5 1203 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 MROH7Q68CQ1 1323 aa18.09■□□□□ 0.49
PHGDH-202ENST00000369409 MACROD2A1Z1Q3 448 aa18.08■□□□□ 0.49
PHGDH-202ENST00000369409 GRK4P32298 578 aa18.08■□□□□ 0.49
PHGDH-202ENST00000369409 GRM5P41594 1212 aa18.08■□□□□ 0.49
PHGDH-202ENST00000369409 JADE1Q6IE81 842 aa18.08■□□□□ 0.49
PHGDH-202ENST00000369409 APBB1IPQ7Z5R6 666 aaPredicted RBP18.08■□□□□ 0.49
PHGDH-202ENST00000369409 GLYCTKQ8IVS8 523 aa18.08■□□□□ 0.49
PHGDH-202ENST00000369409 TXLNBQ8N3L3 684 aa18.08■□□□□ 0.49
PHGDH-202ENST00000369409 SLC20A1Q8WUM9 679 aa18.08■□□□□ 0.49
PHGDH-202ENST00000369409 FAM81BQ96LP2 452 aa18.08■□□□□ 0.49
PHGDH-202ENST00000369409 ACAP3Q96P50 834 aa18.08■□□□□ 0.49
PHGDH-202ENST00000369409 PACSIN1Q9BY11 444 aa18.08■□□□□ 0.49
PHGDH-202ENST00000369409 EIF2AQ9BY44 585 aaKnown RBP18.08■□□□□ 0.49
PHGDH-202ENST00000369409 CELF4Q9BZC1 486 aaKnown RBP18.08■□□□□ 0.49
PHGDH-202ENST00000369409 TRIM17Q9Y577 477 aa18.08■□□□□ 0.49
PHGDH-202ENST00000369409 GRIN2DO15399 1336 aa18.08■□□□□ 0.48
PHGDH-202ENST00000369409 UMODL1Q5DID0 1318 aa18.08■□□□□ 0.48
PHGDH-202ENST00000369409 M0QZ92 97 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 RIOK3O14730 519 aaKnown RBP18.07■□□□□ 0.48
PHGDH-202ENST00000369409 PJA2O43164 708 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 CYP26A1O43174 497 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 CST3P01034 146 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-202ENST00000369409 CTSHP09668 335 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 KRT5P13647 590 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 PRMT2P55345 433 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms