RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 LIG4P49917 911 aa20.7■□□□□ 0.9
CKS1B-203ENST00000368439 ITIH3Q06033 890 aa20.7■□□□□ 0.9
CKS1B-203ENST00000368439 ATL3Q6DD88 541 aa20.7■□□□□ 0.9
CKS1B-203ENST00000368439 KIAA1841Q6NSI8 718 aa20.7■□□□□ 0.9
CKS1B-203ENST00000368439 DCLRE1AQ6PJP8 1040 aa20.7■□□□□ 0.9
CKS1B-203ENST00000368439 RIN2Q8WYP3 895 aaPredicted RBP20.7■□□□□ 0.9
CKS1B-203ENST00000368439 BICD1Q96G01 975 aa20.7■□□□□ 0.9
CKS1B-203ENST00000368439 FBXL18Q96ME1 805 aa20.7■□□□□ 0.9
CKS1B-203ENST00000368439 POP1Q99575 1024 aaKnown RBP20.7■□□□□ 0.9
CKS1B-203ENST00000368439 FNIP2Q9P278 1114 aa20.7■□□□□ 0.9
CKS1B-203ENST00000368439 TCHHQ07283 1943 aa20.69■□□□□ 0.9
CKS1B-203ENST00000368439 A0A0B4J269 797 aa20.69■□□□□ 0.9
CKS1B-203ENST00000368439 ANKRD63C9JTQ0 380 aa20.69■□□□□ 0.9
CKS1B-203ENST00000368439 HNRNPDLO14979 420 aaKnown RBP20.69■□□□□ 0.9
CKS1B-203ENST00000368439 ADH1AP07327 375 aa20.69■□□□□ 0.9
CKS1B-203ENST00000368439 CXCL8P10145 99 aa20.69■□□□□ 0.9
CKS1B-203ENST00000368439 ABCD1P33897 745 aa20.69■□□□□ 0.9
CKS1B-203ENST00000368439 TNFSF9P41273 254 aa20.69■□□□□ 0.9
CKS1B-203ENST00000368439 DNM1Q05193 864 aaKnown RBP20.69■□□□□ 0.9
CKS1B-203ENST00000368439 ZBTB41Q5SVQ8 909 aa20.69■□□□□ 0.9
CKS1B-203ENST00000368439 RARS2Q5T160 578 aaKnown RBP20.69■□□□□ 0.9
CKS1B-203ENST00000368439 FAM171A1Q5VUB5 890 aa20.69■□□□□ 0.9
CKS1B-203ENST00000368439 PRSS55Q6UWB4 352 aaPredicted RBP20.69■□□□□ 0.9
CKS1B-203ENST00000368439 LNX1Q8TBB1 728 aaPredicted RBP20.69■□□□□ 0.9
CKS1B-203ENST00000368439 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.69■□□□□ 0.9
CKS1B-203ENST00000368439 SLC38A7Q9NVC3 462 aa20.69■□□□□ 0.9
CKS1B-203ENST00000368439 KBTBD4Q9NVX7 518 aa20.69■□□□□ 0.9
CKS1B-203ENST00000368439 SEL1LQ9UBV2 794 aa20.69■□□□□ 0.9
CKS1B-203ENST00000368439 PCDHA7Q9UN72 937 aa20.69■□□□□ 0.9
CKS1B-203ENST00000368439 TTC26A0AVF1 554 aa20.68■□□□□ 0.9
CKS1B-203ENST00000368439 B3GAT3O94766 335 aa20.68■□□□□ 0.9
CKS1B-203ENST00000368439 C1RP00736 705 aa20.68■□□□□ 0.9
CKS1B-203ENST00000368439 ADRB2P07550 413 aa20.68■□□□□ 0.9
CKS1B-203ENST00000368439 CLTAP09496 248 aa20.68■□□□□ 0.9
CKS1B-203ENST00000368439 GAP43P17677 238 aa20.68■□□□□ 0.9
CKS1B-203ENST00000368439 RPL17P18621 184 aaKnown RBP20.68■□□□□ 0.9
CKS1B-203ENST00000368439 FGFR3P22607 806 aa20.68■□□□□ 0.9
CKS1B-203ENST00000368439 ELAVL2Q12926 359 aaKnown RBP20.68■□□□□ 0.9
CKS1B-203ENST00000368439 KCNG4Q8TDN1 519 aa20.68■□□□□ 0.9
CKS1B-203ENST00000368439 PIK3R5Q8WYR1 880 aa20.68■□□□□ 0.9
CKS1B-203ENST00000368439 C18orf25Q96B23 403 aaPredicted RBP20.68■□□□□ 0.9
CKS1B-203ENST00000368439 TTPALQ9BTX7 342 aa20.68■□□□□ 0.9
CKS1B-203ENST00000368439 IKZF4Q9H2S9 585 aa20.68■□□□□ 0.9
CKS1B-203ENST00000368439 PLEKHA5Q9HAU0 1116 aa20.68■□□□□ 0.9
CKS1B-203ENST00000368439 RCOR1Q9UKL0 485 aa20.68■□□□□ 0.9
CKS1B-203ENST00000368439 STYXL1Q9Y6J8 313 aa20.68■□□□□ 0.9
CKS1B-203ENST00000368439 TISP43B9A030 160 aa20.67■□□□□ 0.9
CKS1B-203ENST00000368439 OGTO15294 1046 aa20.67■□□□□ 0.9
CKS1B-203ENST00000368439 WEE2P0C1S8 567 aa20.67■□□□□ 0.9
CKS1B-203ENST00000368439 MATR3P43243 847 aaKnown RBP eCLIP20.67■□□□□ 0.9
CKS1B-203ENST00000368439 ZBTB6Q15916 424 aa20.67■□□□□ 0.9
CKS1B-203ENST00000368439 CES5AQ6NT32 575 aa20.67■□□□□ 0.9
CKS1B-203ENST00000368439 LILRA6Q6PI73 481 aa20.67■□□□□ 0.9
CKS1B-203ENST00000368439 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.67■□□□□ 0.9
CKS1B-203ENST00000368439 STAMQ92783 540 aa20.67■□□□□ 0.9
CKS1B-203ENST00000368439 HVCN1Q96D96 273 aa20.67■□□□□ 0.9
CKS1B-203ENST00000368439 DDX27Q96GQ7 796 aaKnown RBP20.67■□□□□ 0.9
CKS1B-203ENST00000368439 FGFBP2Q9BYJ0 223 aa20.67■□□□□ 0.9
CKS1B-203ENST00000368439 TNMDQ9H2S6 317 aa20.67■□□□□ 0.9
CKS1B-203ENST00000368439 POMKQ9H5K3 350 aa20.67■□□□□ 0.9
CKS1B-203ENST00000368439 SFXN1Q9H9B4 322 aa20.67■□□□□ 0.9
CKS1B-203ENST00000368439 OLFML3Q9NRN5 406 aa20.67■□□□□ 0.9
CKS1B-203ENST00000368439 PODXLO00592 558 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 PAPLNO95428 1278 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 GLUD1P00367 558 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 BRCC3P46736 316 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 CASP5P51878 434 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 CREMQ03060 361 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 KCNA1Q09470 495 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 ENOX2Q16206 610 aaKnown RBP20.66■□□□□ 0.9
CKS1B-203ENST00000368439 KYAT1Q16773 422 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 TMC5Q6UXY8 1006 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 RNF135Q8IUD6 432 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 TMEM130Q8N3G9 435 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 CHAMP1Q96JM3 812 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 NECTIN4Q96NY8 510 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 CLSTN3Q9BQT9 956 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 MSTO1Q9BUK6 570 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 CUEDC2Q9H467 287 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 MRPL44Q9H9J2 332 aaKnown RBP20.66■□□□□ 0.9
CKS1B-203ENST00000368439 C11orf16Q9NQ32 467 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 MAN1C1Q9NR34 630 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 TBC1D7Q9P0N9 293 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 CPSF3Q9UKF6 684 aaKnown RBP20.66■□□□□ 0.9
CKS1B-203ENST00000368439 CFAP45Q9UL16 551 aa20.66■□□□□ 0.9
CKS1B-203ENST00000368439 TRIOO75962 3097 aa20.65■□□□□ 0.9
CKS1B-203ENST00000368439 LACTBL1A8MY62 500 aa20.65■□□□□ 0.9
CKS1B-203ENST00000368439 TGM5O43548 720 aa20.65■□□□□ 0.9
CKS1B-203ENST00000368439 ADSSP30520 456 aa20.65■□□□□ 0.9
CKS1B-203ENST00000368439 RPL9P32969 192 aaKnown RBP20.65■□□□□ 0.9
CKS1B-203ENST00000368439 MTHFRP42898 656 aa20.65■□□□□ 0.9
CKS1B-203ENST00000368439 SPAG1Q07617 926 aa20.65■□□□□ 0.9
CKS1B-203ENST00000368439 PSMD5Q16401 504 aa20.65■□□□□ 0.9
CKS1B-203ENST00000368439 HERC4Q5GLZ8 1057 aaPredicted RBP20.65■□□□□ 0.9
CKS1B-203ENST00000368439 RESP18Q5W5W9 173 aa20.65■□□□□ 0.9
CKS1B-203ENST00000368439 GPR149Q86SP6 731 aa20.65■□□□□ 0.9
CKS1B-203ENST00000368439 CEP57Q86XR8 500 aa20.65■□□□□ 0.9
CKS1B-203ENST00000368439 PALB2Q86YC2 1186 aa20.65■□□□□ 0.9
CKS1B-203ENST00000368439 CMASQ8NFW8 434 aaPredicted RBP20.65■□□□□ 0.9
CKS1B-203ENST00000368439 HDAC7Q8WUI4 952 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms