RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 CHST7Q9NS84 486 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 CYP39A1Q9NYL5 469 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 ARHGAP28Q9P2N2 729 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 CAPN7Q9Y6W3 813 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 PTPRJQ12913 1337 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 ECEL1O95672 775 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 FSTL1Q12841 308 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 SEZ6Q53EL9 994 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 ZBTB41Q5SVQ8 909 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 MICALCLQ6ZW33 695 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 SCYL3Q8IZE3 742 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 HEMGNQ9BXL5 484 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 VGLL3A8MV65 326 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 O00370 1275 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 RGS16O15492 202 aaPredicted RBP19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 HLA-DRAP01903 254 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 POLGP54098 1239 aaPredicted RBP19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 BYSLQ13895 437 aaKnown RBP19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 WDR44Q5JSH3 913 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 SPDYCQ5MJ68 293 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 TDRD10Q5VZ19 366 aaKnown RBP19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 FAM118BQ9BPY3 351 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 MROH7Q68CQ1 1323 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 PASKQ96RG2 1323 aa19.34■□□□□ 0.69
UBQLN4-201ENST00000368309 DSG3P32926 999 aa19.33■□□□□ 0.69
UBQLN4-201ENST00000368309 ART4Q93070 314 aa19.33■□□□□ 0.69
UBQLN4-201ENST00000368309 DNAJC17Q9NVM6 304 aaKnown RBP19.33■□□□□ 0.69
UBQLN4-201ENST00000368309 MYPNQ86TC9 1320 aa19.33■□□□□ 0.69
UBQLN4-201ENST00000368309 EXTL3O43909 919 aa19.33■□□□□ 0.68
UBQLN4-201ENST00000368309 SCARA3Q6AZY7 606 aa19.33■□□□□ 0.68
UBQLN4-201ENST00000368309 HAPLN2Q9GZV7 340 aa19.33■□□□□ 0.68
UBQLN4-201ENST00000368309 PARP2Q9UGN5 583 aa19.33■□□□□ 0.68
UBQLN4-201ENST00000368309 LRRIQ4A6NIV6 560 aa19.33■□□□□ 0.68
UBQLN4-201ENST00000368309 FDX1P10109 184 aa19.33■□□□□ 0.68
UBQLN4-201ENST00000368309 ATP4AP20648 1035 aa19.33■□□□□ 0.68
UBQLN4-201ENST00000368309 PIK3CAP42336 1068 aa19.33■□□□□ 0.68
UBQLN4-201ENST00000368309 PRKG1Q13976 671 aa19.33■□□□□ 0.68
UBQLN4-201ENST00000368309 DALRD3Q5D0E6 543 aaKnown RBP19.33■□□□□ 0.68
UBQLN4-201ENST00000368309 C15orf39Q6ZRI6 1047 aa19.33■□□□□ 0.68
UBQLN4-201ENST00000368309 CCDC113Q9H0I3 377 aa19.33■□□□□ 0.68
UBQLN4-201ENST00000368309 ANKFY1Q9P2R3 1169 aa19.33■□□□□ 0.68
UBQLN4-201ENST00000368309 ASIC3Q9UHC3 531 aa19.33■□□□□ 0.68
UBQLN4-201ENST00000368309 AGO2Q9UKV8 859 aaKnown RBP19.33■□□□□ 0.68
UBQLN4-201ENST00000368309 PCDHB2Q9Y5E7 798 aa19.33■□□□□ 0.68
UBQLN4-201ENST00000368309 NFKBIEO00221 500 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 FSCN2O14926 492 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 DKC1O60832 514 aaKnown RBP eCLIP19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 CHN1P15882 459 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 VPS41P49754 854 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 KRT17Q04695 432 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 CALCOCO2Q13137 446 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 EMC2Q15006 297 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 CCDC38Q502W7 563 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 CPLX4Q7Z7G2 160 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 SPATS2Q86XZ4 545 aaKnown RBP19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 LRRC19Q9H756 370 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 RIPK2O43353 540 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 HARSP12081 509 aaKnown RBP19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 NSFP46459 744 aaKnown RBP19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 FNTAP49354 379 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 STRN3Q13033 797 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 C11orf70Q9BRQ4 267 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 DDX23Q9BUQ8 820 aaKnown RBP19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 FER1L6Q2WGJ9 1857 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 ZACNQ401N2 412 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 TMEM270Q6UE05 265 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 ENOSF1Q7L5Y1 443 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 ASAP3Q8TDY4 903 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 TARS2Q9BW92 718 aaKnown RBP19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 GINM1Q9NU53 330 aa19.32■□□□□ 0.68
UBQLN4-201ENST00000368309 GJB6O95452 261 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 ACSL3O95573 720 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 CPP00450 1065 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 C4BPAP04003 597 aaKnown RBP19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 RARGP13631 454 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 GJC1P36383 396 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 XKR3Q5GH77 459 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 MIS18BP1Q6P0N0 1132 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 PGM2Q96G03 612 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 APOBEC3GQ9HC16 384 aaKnown RBP19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 TNS1Q9HBL0 1735 aaKnown RBP19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 ZNF541Q9H0D2 1346 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 SRRM3A6NNA2 597 aaPredicted RBP19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 VNN1O95497 513 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 CRELD2Q6UXH1 353 aaPredicted RBP19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 SEPT14Q6ZU15 432 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 CCDC50Q8IVM0 306 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 SEC16BQ96JE7 1060 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 XPO6Q96QU8 1125 aaKnown RBP19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 CEP89Q96ST8 783 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 PAGR1Q9BTK6 254 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 PLVAPQ9BX97 442 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 AS3MTQ9HBK9 375 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 R3HDM2Q9Y2K5 976 aaKnown RBP19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 PCDHB4Q9Y5E5 795 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 SPATA31C2B4DYI2 1134 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 H0YHG0 523 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 K7ERI5 159 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 TP73O15350 636 aa19.31■□□□□ 0.68
UBQLN4-201ENST00000368309 ZBTB7AO95365 584 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms