RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 PSAPP07602 524 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 FGFR4P22455 802 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 IFI35P80217 286 aaPredicted RBP15.26■□□□□ 0.03
CD48-201ENST00000368045 KRT17Q04695 432 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 KCTD19Q17RG1 926 aaPredicted RBP15.26■□□□□ 0.03
CD48-201ENST00000368045 RHBDF2Q6PJF5 856 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 NSMFQ6X4W1 530 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 PIGWQ7Z7B1 504 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 CCT6BQ92526 530 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 IFT74Q96LB3 600 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 POP1Q99575 1024 aaKnown RBP15.26■□□□□ 0.03
CD48-201ENST00000368045 SH2D3AQ9BRG2 576 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 KIFC3Q9BVG8 833 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 MAF1Q9H063 256 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 ZNF277Q9NRM2 450 aaPredicted RBP15.26■□□□□ 0.03
CD48-201ENST00000368045 RGPD3A6NKT7 1758 aaPredicted RBP15.26■□□□□ 0.03
CD48-201ENST00000368045 RGPD4Q7Z3J3 1758 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 NFASCO94856 1347 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 VGLL3A8MV65 326 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 WNT10BO00744 389 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 HNRNPDLO14979 420 aaKnown RBP15.26■□□□□ 0.03
CD48-201ENST00000368045 EXTL3O43909 919 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 TCEA3O75764 348 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 STBD1O95210 358 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 DLATP10515 647 aaKnown RBP15.26■□□□□ 0.03
CD48-201ENST00000368045 KCNJ1P48048 391 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 TNFAIP1Q13829 316 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 PSMD6Q15008 389 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 WDR44Q5JSH3 913 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 LIN9Q5TKA1 542 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 CPNE8Q86YQ8 564 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 CCDC50Q8IVM0 306 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 BBOF1Q8ND07 529 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 EPS8L3Q8TE67 593 aaKnown RBP15.26■□□□□ 0.03
CD48-201ENST00000368045 CDHR1Q96JP9 859 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 A1CFQ9NQ94 594 aaKnown RBP15.26■□□□□ 0.03
CD48-201ENST00000368045 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.26■□□□□ 0.03
CD48-201ENST00000368045 ARHGAP28Q9P2N2 729 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 GABBR1Q9UBS5 961 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 ASIC3Q9UHC3 531 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 MYPNQ86TC9 1320 aa15.25■□□□□ 0.03
CD48-201ENST00000368045 PSTPIP1O43586 416 aa15.25■□□□□ 0.03
CD48-201ENST00000368045 SORBS3O60504 671 aa15.25■□□□□ 0.03
CD48-201ENST00000368045 DNAJC8O75937 253 aaPredicted RBP15.25■□□□□ 0.03
CD48-201ENST00000368045 PROSCO94903 275 aa15.25■□□□□ 0.03
CD48-201ENST00000368045 CYP1A1P04798 512 aaPredicted RBP15.25■□□□□ 0.03
CD48-201ENST00000368045 GSTA1P08263 222 aa15.25■□□□□ 0.03
CD48-201ENST00000368045 CNGA2Q16280 664 aa15.25■□□□□ 0.03
CD48-201ENST00000368045 CEP128Q6ZU80 1094 aa15.25■□□□□ 0.03
CD48-201ENST00000368045 ATL2Q8NHH9 583 aa15.25■□□□□ 0.03
CD48-201ENST00000368045 VCPIP1Q96JH7 1222 aa15.25■□□□□ 0.03
CD48-201ENST00000368045 DCLK3Q9C098 648 aa15.25■□□□□ 0.03
CD48-201ENST00000368045 CDC42EP4Q9H3Q1 356 aaKnown RBP15.25■□□□□ 0.03
CD48-201ENST00000368045 ATP6V0A4Q9HBG4 840 aa15.25■□□□□ 0.03
CD48-201ENST00000368045 SLC40A1Q9NP59 571 aa15.25■□□□□ 0.03
CD48-201ENST00000368045 SAMD15Q9P1V8 674 aa15.25■□□□□ 0.03
CD48-201ENST00000368045 MROH7Q68CQ1 1323 aa15.25■□□□□ 0.03
CD48-201ENST00000368045 COL4A5P29400 1685 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 SMIM23A6NLE4 172 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 CCT8L1PA6NM43 557 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 VWA5AO00534 786 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 ZNF862O60290 1169 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 STAM2O75886 525 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 NR3C2P08235 984 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 POTEJP0CG39 1038 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 NSFP46459 744 aaKnown RBP15.24■□□□□ 0.03
CD48-201ENST00000368045 SCTRP47872 440 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 OAZ1P54368 228 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 ZACNQ401N2 412 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 C1orf54Q8WWF1 131 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 BICD1Q96G01 975 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 DDX27Q96GQ7 796 aaKnown RBP15.24■□□□□ 0.03
CD48-201ENST00000368045 FAM213AQ9BRX8 229 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 FOXP3Q9BZS1 431 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 RPAP3Q9H6T3 665 aaPredicted RBP15.24■□□□□ 0.03
CD48-201ENST00000368045 AAASQ9NRG9 546 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 KLC4Q9NSK0 619 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 RNF146Q9NTX7 359 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 STYXL1Q9Y6J8 313 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 DNM1LO00429 736 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 TP73O15350 636 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 TTC4O95801 387 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 ATF2P15336 505 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 KCNA2P16389 499 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 IVDP26440 423 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 MNAT1P51948 309 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 NBPF9Q3BBW0 867 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 TBC1D10BQ4KMP7 808 aaPredicted RBP15.24■□□□□ 0.03
CD48-201ENST00000368045 MON1BQ7L1V2 547 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 CCDC25Q86WR0 208 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 TEPSINQ96N21 525 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 TRAIPQ9BWF2 469 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 MRPL47Q9HD33 250 aaKnown RBP15.24■□□□□ 0.03
CD48-201ENST00000368045 MYOZ2Q9NPC6 264 aa15.24■□□□□ 0.03
CD48-201ENST00000368045 ADGRA3Q8IWK6 1321 aa15.23■□□□□ 0.03
CD48-201ENST00000368045 PIGRP01833 764 aa15.23■□□□□ 0.03
CD48-201ENST00000368045 RRM1P23921 792 aa15.23■□□□□ 0.03
CD48-201ENST00000368045 XRCC4Q13426 336 aa15.23■□□□□ 0.03
CD48-201ENST00000368045 BAATQ14032 418 aaPredicted RBP15.23■□□□□ 0.03
CD48-201ENST00000368045 CCNG2Q16589 344 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms