RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ADAMTS1Q9UHI8 967 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 MSRAQ9UJ68 235 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 PCDHA12Q9UN75 941 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 YBX2Q9Y2T7 364 aaKnown RBP12.4□□□□□ -0.42
USF1-201ENST00000368019 UBE4BO95155 1302 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 FRMPD2Q68DX3 1309 aaPredicted RBP12.39□□□□□ -0.43
USF1-201ENST00000368019 ESYT3A0FGR9 886 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 F8VZ95 297 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 MYO1FO00160 1098 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 ASAP2O43150 1006 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 CEP104O60308 925 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 GOLGA8HP0CJ92 632 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 UCHL3P15374 230 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 RFX1P22670 979 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 EDNRBP24530 442 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 PTENP60484 403 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 PTK2Q05397 1052 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 ZNF543Q08ER8 600 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 AP3B2Q13367 1082 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 ADAM9Q13443 819 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 BYSLQ13895 437 aaKnown RBP12.39□□□□□ -0.43
USF1-201ENST00000368019 SNCBQ16143 134 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 ANKRD20A8PQ5CZ79 823 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 GKAP1Q5VSY0 366 aaPredicted RBP12.39□□□□□ -0.43
USF1-201ENST00000368019 TTC19Q6DKK2 380 aaPredicted RBP12.39□□□□□ -0.43
USF1-201ENST00000368019 SLC30A10Q6XR72 485 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 OTOP2Q7RTS6 562 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 ZNF571Q7Z3V5 609 aaPredicted RBP12.39□□□□□ -0.43
USF1-201ENST00000368019 NT5DC3Q86UY8 548 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 KLHL7Q8IXQ5 586 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 RPUSD2Q8IZ73 545 aaKnown RBP12.39□□□□□ -0.43
USF1-201ENST00000368019 ERMNQ8TAM6 284 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 RUNDC3BQ96NL0 473 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 MTIF3Q9H2K0 278 aaKnown RBP12.39□□□□□ -0.43
USF1-201ENST00000368019 NKX2-4Q9H2Z4 354 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 SLC40A1Q9NP59 571 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 KCNMB3Q9NPA1 279 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 GPCPD1Q9NPB8 672 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 TYW1Q9NV66 732 aaKnown RBP12.39□□□□□ -0.43
USF1-201ENST00000368019 PARP2Q9UGN5 583 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 AMFRQ9UKV5 643 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 PNMA2Q9UL42 364 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 UTP11Q9Y3A2 253 aaKnown RBP12.39□□□□□ -0.43
USF1-201ENST00000368019 TANC1Q9C0D5 1861 aa12.39□□□□□ -0.43
USF1-201ENST00000368019 PRRC2BQ5JSZ5 2229 aaKnown RBP12.39□□□□□ -0.43
USF1-201ENST00000368019 KRIT1O00522 736 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 GGPS1O95749 300 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 TMEM253P0C7T8 217 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 NR2F2P24468 414 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 PON1P27169 355 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 SEC24CP53992 1094 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 SLC12A3P55017 1021 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 RPS6P62753 249 aaKnown RBP12.38□□□□□ -0.43
USF1-201ENST00000368019 MRPS25P82663 173 aaKnown RBP12.38□□□□□ -0.43
USF1-201ENST00000368019 IFT88Q13099 833 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 EPHA7Q15375 998 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 EXOC3L4Q17RC7 722 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 KNOP1Q1ED39 458 aaKnown RBP12.38□□□□□ -0.43
USF1-201ENST00000368019 ERMARDQ5T6L9 678 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 RNF187Q5TA31 235 aaPredicted RBP12.38□□□□□ -0.43
USF1-201ENST00000368019 RNF207Q6ZRF8 634 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 GPBP1Q86WP2 473 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 ATXN2LQ8WWM7 1075 aaKnown RBP12.38□□□□□ -0.43
USF1-201ENST00000368019 RFFLQ8WZ73 363 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 ZBTB9Q96C00 473 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 SCLYQ96I15 445 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 SEC16BQ96JE7 1060 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 CCDC114Q96M63 670 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 PACSIN1Q9BY11 444 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 STMN4Q9H169 189 aaPredicted RBP12.38□□□□□ -0.43
USF1-201ENST00000368019 CXorf56Q9H5V9 222 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 TRMT13Q9NUP7 481 aaKnown RBP12.38□□□□□ -0.43
USF1-201ENST00000368019 RASAL2Q9UJF2 1139 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 PTPRSQ13332 1948 aa12.38□□□□□ -0.43
USF1-201ENST00000368019 GOLGA6L10A0A0M3HER8 536 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 CFAP73A6NFT4 308 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 A6NJR5 290 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 CCDC169A6NNP5 214 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 EIF3DO15371 548 aaKnown RBP eCLIP12.37□□□□□ -0.43
USF1-201ENST00000368019 SUPT20HL2P0C7V6 817 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 CYP2C9P11712 490 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 GAP43P17677 238 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 DRD4P21917 467 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 STAT1P42224 750 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 CPT1AP50416 773 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 RIPK1Q13546 671 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 SLMAPQ14BN4 828 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 ECM1Q16610 540 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 HERC4Q5GLZ8 1057 aaPredicted RBP12.37□□□□□ -0.43
USF1-201ENST00000368019 FUKQ8N0W3 1084 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 PLCD3Q8N3E9 789 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 SYT2Q8N9I0 419 aaPredicted RBP12.37□□□□□ -0.43
USF1-201ENST00000368019 GLIS3Q8NEA6 775 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 DNERQ8NFT8 737 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 SLC30A5Q8TAD4 765 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 CCHCR1Q8TD31 782 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 CCT6BQ92526 530 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 RAPGEF5Q92565 580 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 XPO6Q96QU8 1125 aaKnown RBP12.37□□□□□ -0.43
USF1-201ENST00000368019 FMO2Q99518 471 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms