RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 SCP2P22307 547 aa16.25■□□□□ 0.19
CTSD-202ENST00000367196 GJB2P29033 226 aa16.25■□□□□ 0.19
CTSD-202ENST00000367196 CLCNKBP51801 687 aa16.25■□□□□ 0.19
CTSD-202ENST00000367196 RAB33AQ14088 237 aa16.25■□□□□ 0.19
CTSD-202ENST00000367196 DAW1Q8N136 415 aa16.25■□□□□ 0.19
CTSD-202ENST00000367196 TMX3Q96JJ7 454 aa16.25■□□□□ 0.19
CTSD-202ENST00000367196 AK8Q96MA6 479 aa16.25■□□□□ 0.19
CTSD-202ENST00000367196 MYADMQ96S97 322 aa16.25■□□□□ 0.19
CTSD-202ENST00000367196 POLD4Q9HCU8 107 aa16.25■□□□□ 0.19
CTSD-202ENST00000367196 PTPRHQ9HD43 1115 aa16.25■□□□□ 0.19
CTSD-202ENST00000367196 MTRRQ9UBK8 725 aa16.25■□□□□ 0.19
CTSD-202ENST00000367196 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.25■□□□□ 0.19
CTSD-202ENST00000367196 BACE2Q9Y5Z0 518 aa16.25■□□□□ 0.19
CTSD-202ENST00000367196 VWA3AA6NCI4 1184 aa16.24■□□□□ 0.19
CTSD-202ENST00000367196 H0Y858 1186 aa16.24■□□□□ 0.19
CTSD-202ENST00000367196 SLC16A4O15374 487 aa16.24■□□□□ 0.19
CTSD-202ENST00000367196 BMP15O95972 392 aa16.24■□□□□ 0.19
CTSD-202ENST00000367196 LAMP2P13473 410 aa16.24■□□□□ 0.19
CTSD-202ENST00000367196 PLS3P13797 630 aa16.24■□□□□ 0.19
CTSD-202ENST00000367196 PROZP22891 400 aa16.24■□□□□ 0.19
CTSD-202ENST00000367196 CDC25AP30304 524 aa16.24■□□□□ 0.19
CTSD-202ENST00000367196 NOLC1Q14978 699 aaKnown RBP eCLIP16.24■□□□□ 0.19
CTSD-202ENST00000367196 IL17AQ16552 155 aa16.24■□□□□ 0.19
CTSD-202ENST00000367196 XKR4Q5GH76 650 aa16.24■□□□□ 0.19
CTSD-202ENST00000367196 CWF19L1Q69YN2 538 aaKnown RBP16.24■□□□□ 0.19
CTSD-202ENST00000367196 MTSS1LQ765P7 747 aa16.24■□□□□ 0.19
CTSD-202ENST00000367196 SYT2Q8N9I0 419 aaPredicted RBP16.24■□□□□ 0.19
CTSD-202ENST00000367196 SLC7A14Q8TBB6 771 aa16.24■□□□□ 0.19
CTSD-202ENST00000367196 SNX27Q96L92 541 aa16.24■□□□□ 0.19
CTSD-202ENST00000367196 NTPCRQ9BSD7 190 aaKnown RBP16.24■□□□□ 0.19
CTSD-202ENST00000367196 MMTAG2Q9BU76 263 aaKnown RBP16.24■□□□□ 0.19
CTSD-202ENST00000367196 CNTN3Q9P232 1028 aa16.24■□□□□ 0.19
CTSD-202ENST00000367196 LARSQ9P2J5 1176 aaKnown RBP16.24■□□□□ 0.19
CTSD-202ENST00000367196 SMC3Q9UQE7 1217 aa16.24■□□□□ 0.19
CTSD-202ENST00000367196 PODXLO00592 558 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 SYN3O14994 580 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 TOM1L1O75674 476 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 CFHP08603 1231 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 RPL9P32969 192 aaKnown RBP16.23■□□□□ 0.19
CTSD-202ENST00000367196 OR1D2P34982 312 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 OSTNP61366 133 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 MAPK7Q13164 816 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 AXDND1Q5T1B0 1012 aaPredicted RBP16.23■□□□□ 0.19
CTSD-202ENST00000367196 ALKAL1Q6UXT8 129 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 ZPBP2Q6X784 338 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 GRASPQ7Z6J2 395 aaPredicted RBP16.23■□□□□ 0.19
CTSD-202ENST00000367196 SLC44A3Q8N4M1 653 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 CEP120Q8N960 986 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 CALML4Q96GE6 196 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 PHOX2BQ99453 314 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 TARS2Q9BW92 718 aaKnown RBP16.23■□□□□ 0.19
CTSD-202ENST00000367196 CXCL16Q9H2A7 254 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 FAM86C1Q9NVL1 165 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 ANKFY1Q9P2R3 1169 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 CDH7Q9ULB5 785 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 POLIQ9UNA4 740 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 NUB1Q9Y5A7 615 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 CDY1Q9Y6F8 540 aa16.23■□□□□ 0.19
CTSD-202ENST00000367196 ANHXE9PGG2 379 aa16.22■□□□□ 0.19
CTSD-202ENST00000367196 H7C4K7 107 aa16.22■□□□□ 0.19
CTSD-202ENST00000367196 STK25O00506 426 aa16.22■□□□□ 0.19
CTSD-202ENST00000367196 NARSO43776 548 aaKnown RBP16.22■□□□□ 0.19
CTSD-202ENST00000367196 GFRA3O60609 400 aa16.22■□□□□ 0.19
CTSD-202ENST00000367196 KCNE1P15382 129 aa16.22■□□□□ 0.19
CTSD-202ENST00000367196 ABCD1P33897 745 aa16.22■□□□□ 0.19
CTSD-202ENST00000367196 MATR3P43243 847 aaKnown RBP eCLIP16.22■□□□□ 0.19
CTSD-202ENST00000367196 HTR4Q13639 388 aa16.22■□□□□ 0.19
CTSD-202ENST00000367196 KYAT1Q16773 422 aa16.22■□□□□ 0.19
CTSD-202ENST00000367196 TAS1R3Q7RTX0 852 aa16.22■□□□□ 0.19
CTSD-202ENST00000367196 KCNK18Q7Z418 384 aa16.22■□□□□ 0.19
CTSD-202ENST00000367196 RSAD2Q8WXG1 361 aa16.22■□□□□ 0.19
CTSD-202ENST00000367196 GOLGA2P5Q9HBQ8 144 aa16.22■□□□□ 0.19
CTSD-202ENST00000367196 KCNH3Q9ULD8 1083 aa16.22■□□□□ 0.19
CTSD-202ENST00000367196 ODF2LQ9ULJ1 636 aa16.22■□□□□ 0.19
CTSD-202ENST00000367196 PROB1E7EW31 1015 aa16.21■□□□□ 0.19
CTSD-202ENST00000367196 CCL16O15467 120 aa16.21■□□□□ 0.19
CTSD-202ENST00000367196 CLDN3O15551 220 aa16.21■□□□□ 0.19
CTSD-202ENST00000367196 PLA2G4BP0C869 781 aa16.21■□□□□ 0.19
CTSD-202ENST00000367196 HARSP12081 509 aaKnown RBP16.21■□□□□ 0.19
CTSD-202ENST00000367196 TKTP29401 623 aaKnown RBP16.21■□□□□ 0.19
CTSD-202ENST00000367196 ELF1P32519 619 aa16.21■□□□□ 0.19
CTSD-202ENST00000367196 UBA7P41226 1012 aa16.21■□□□□ 0.19
CTSD-202ENST00000367196 SLC12A3P55017 1021 aa16.21■□□□□ 0.19
CTSD-202ENST00000367196 RAD51AP2Q09MP3 1159 aa16.21■□□□□ 0.19
CTSD-202ENST00000367196 TMEM119Q4V9L6 283 aa16.21■□□□□ 0.19
CTSD-202ENST00000367196 PABPC1LQ4VXU2 614 aaKnown RBP16.21■□□□□ 0.19
CTSD-202ENST00000367196 BRAPQ7Z569 592 aa16.21■□□□□ 0.19
CTSD-202ENST00000367196 CCDC105Q8IYK2 499 aa16.21■□□□□ 0.19
CTSD-202ENST00000367196 TMEM161BQ8NDZ6 487 aa16.21■□□□□ 0.19
CTSD-202ENST00000367196 RASSF8Q8NHQ8 419 aa16.21■□□□□ 0.19
CTSD-202ENST00000367196 BICD1Q96G01 975 aa16.21■□□□□ 0.19
CTSD-202ENST00000367196 SLC2A4RGQ9NR83 387 aa16.21■□□□□ 0.19
CTSD-202ENST00000367196 NUMBLQ9Y6R0 609 aa16.21■□□□□ 0.19
CTSD-202ENST00000367196 PDCD11Q14690 1871 aaKnown RBP16.2■□□□□ 0.18
CTSD-202ENST00000367196 SFI1A8K8P3 1242 aa16.2■□□□□ 0.18
CTSD-202ENST00000367196 ABLIM1O14639 778 aa16.2■□□□□ 0.18
CTSD-202ENST00000367196 ADAM12O43184 909 aa16.2■□□□□ 0.18
CTSD-202ENST00000367196 LRG1P02750 347 aa16.2■□□□□ 0.18
CTSD-202ENST00000367196 MAPTP10636 758 aaKnown RBP16.2■□□□□ 0.18
CTSD-202ENST00000367196 NPR3P17342 541 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms