RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 PABPC3Q9H361 631 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 UNC45AQ9H3U1 944 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 SUGCTQ9HAC7 445 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 UBAP1Q9NZ09 502 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 REXO2Q9Y3B8 237 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 GIPC1O14908 333 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 SLC16A4O15374 487 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 TTI1O43156 1089 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 KRT7P08729 469 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 TM4SF1P30408 202 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 CACNB3P54284 484 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 TFDP2Q14188 446 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 NPY5RQ15761 445 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 MMEL1Q495T6 779 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 CRY2Q49AN0 593 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 ZNF746Q6NUN9 644 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 BZW1Q7L1Q6 419 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 OTOP1Q7RTM1 612 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 KSR1Q8IVT5 923 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 SLC5A5Q92911 643 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 CNGB3Q9NQW8 809 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 ZNF70Q9UC06 446 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 PCDHB2Q9Y5E7 798 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 ESYT3A0FGR9 886 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 C19orf81C9J6K1 198 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 M0R2N6 131 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 KRT19P08727 400 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 GABPAQ06546 454 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 JAMLQ86YT9 394 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 SLC9A9Q8IVB4 645 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 MSTO1Q9BUK6 570 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 RAVER2Q9HCJ3 691 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 CASZ1Q86V15 1759 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 KRT14P02533 472 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 INHBAP08476 426 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 GARTP22102 1010 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 GNA15P30679 374 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 FAM182BQ5T319 152 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 LRRC55Q6ZSA7 311 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 CDKL2Q92772 493 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 EFHD1Q9BUP0 239 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 WDR35Q9P2L0 1181 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 HESX1Q9UBX0 185 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 C5P01031 1676 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 ADAMTS7Q9UKP4 1686 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 SLC20A2Q08357 652 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 MAPK7Q13164 816 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 CYLC2Q14093 348 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 KRT81Q14533 505 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 FKBP1CQ5VVH2 108 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 SNRNP27Q8WVK2 155 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 SGSM3Q96HU1 749 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 XPO6Q96QU8 1125 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 TRIM56Q9BRZ2 755 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 KIFC3Q9BVG8 833 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 SMG5Q9UPR3 1016 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 F8VZ95 297 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 ESRRBO95718 433 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 ICAM1P05362 532 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 GHRP10912 638 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 DRG2P55039 364 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 SLC15A2Q16348 729 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 KAZNQ674X7 775 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 ZNF354CQ86Y25 554 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 APOBEC3FQ8IUX4 373 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 AGBL3Q8NEM8 1001 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 MTMR8Q96EF0 704 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 MAF1Q9H063 256 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 GANQ9H2C0 597 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 FAM96AQ9H5X1 160 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 TFR2Q9UP52 801 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 PPME1Q9Y570 386 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 GOLGA8QA0A0J9YX86 632 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 GOLGA8OA6NCC3 632 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 GOLGA8NF8WBI6 632 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 CLDN3O15551 220 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 TPD52L2O43399 206 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 PLA2G6O60733 806 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 DAB1O75553 588 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 RARGP13631 454 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 COILP38432 576 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 RFC5P40937 340 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 GARSP41250 739 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 EFNA5P52803 228 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 PTENP60484 403 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 TRIM60Q495X7 471 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 PPWD1Q96BP3 646 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 FAM213AQ9BRX8 229 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 TBC1D23Q9NUY8 699 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 DMGDHQ9UI17 866 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 ARIH1Q9Y4X5 557 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 FAM196BA6NMK8 535 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 BRAFP15056 766 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 CLK2P49760 499 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 AP2B1P63010 937 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 CDR2Q01850 454 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 ITIH4Q14624 930 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 PCNX4Q63HM2 1172 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 RFX6Q8HWS3 928 aa5.67□□□□□ -1.5
CDC42BPA-204ENST00000366767 CASP10Q92851 521 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms