RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 MCL1Q07820 350 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 RESTQ13127 1097 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 PSMD5Q16401 504 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 SLC10A6Q3KNW5 377 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 OTOP3Q7RTS5 596 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 ZBTB33Q86T24 672 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 GLYCTKQ8IVS8 523 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 FBXL6Q8N531 539 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 CDK5RAP3Q96JB5 506 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 ACAP3Q96P50 834 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 REEP2Q9BRK0 252 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 PRKD2Q9BZL6 878 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 SMOC2Q9H3U7 446 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 LARSQ9P2J5 1176 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 FBXW11Q9UKB1 542 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 CLIC4Q9Y696 253 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 KMT2EQ8IZD2 1858 aa14.97□□□□□ -0.01
TNFRSF1A-202ENST00000366159 ZMYND10O75800 440 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 PIGRP01833 764 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 MYBP10242 640 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 PLCG1P19174 1290 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 STRN3Q13033 797 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 RAB33AQ14088 237 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 MCM6Q14566 821 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 KARSQ15046 597 aaKnown RBP14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 IER5LQ5T953 404 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 PDXDC1Q6P996 788 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 ELMSAN1Q6PJG2 1045 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 RSPO2Q6UXX9 243 aaPredicted RBP14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 USP49Q70CQ1 688 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 HAUS6Q7Z4H7 955 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 CEP57Q86XR8 500 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 SMG7Q92540 1137 aaKnown RBP14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 RAD54LQ92698 747 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 ACSF2Q96CM8 615 aaPredicted RBP14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 CALML4Q96GE6 196 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 DDX27Q96GQ7 796 aaKnown RBP14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 TCHPQ9BT92 498 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 SLC38A7Q9NVC3 462 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 EPS15L1Q9UBC2 864 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 MTRRQ9UBK8 725 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 FBXO2Q9UK22 296 aaPredicted RBP14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 MORC2Q9Y6X9 1032 aaPredicted RBP14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 ZDBF2Q9HCK1 2354 aa14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 PDCD11Q14690 1871 aaKnown RBP14.96□□□□□ -0.01
TNFRSF1A-202ENST00000366159 CLUHO75153 1309 aa14.95□□□□□ -0.02
TNFRSF1A-202ENST00000366159 VPS37CA5D8V6 355 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1A-202ENST00000366159 SPDYE4A6NLX3 237 aa14.95□□□□□ -0.02
TNFRSF1A-202ENST00000366159 H0YCG3 227 aa14.95□□□□□ -0.02
TNFRSF1A-202ENST00000366159 FAM189A1O60320 539 aa14.95□□□□□ -0.02
TNFRSF1A-202ENST00000366159 TBC1D4O60343 1298 aa14.95□□□□□ -0.02
TNFRSF1A-202ENST00000366159 PDGFBP01127 241 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1A-202ENST00000366159 SCP2P22307 547 aa14.95□□□□□ -0.02
TNFRSF1A-202ENST00000366159 DDIT3P35638 169 aa14.95□□□□□ -0.02
TNFRSF1A-202ENST00000366159 NOLC1Q14978 699 aaKnown RBP eCLIP14.95□□□□□ -0.02
TNFRSF1A-202ENST00000366159 GPBP1Q86WP2 473 aa14.95□□□□□ -0.02
TNFRSF1A-202ENST00000366159 C18orf25Q96B23 403 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1A-202ENST00000366159 EPSTI1Q96J88 318 aa14.95□□□□□ -0.02
TNFRSF1A-202ENST00000366159 KCNK12Q9HB15 430 aa14.95□□□□□ -0.02
TNFRSF1A-202ENST00000366159 TBX20Q9UMR3 447 aa14.95□□□□□ -0.02
TNFRSF1A-202ENST00000366159 SRPRBQ9Y5M8 271 aaKnown RBP14.95□□□□□ -0.02
TNFRSF1A-202ENST00000366159 BACE2Q9Y5Z0 518 aa14.95□□□□□ -0.02
TNFRSF1A-202ENST00000366159 CITO14578 2027 aa14.95□□□□□ -0.02
TNFRSF1A-202ENST00000366159 TTC26A0AVF1 554 aa14.94□□□□□ -0.02
TNFRSF1A-202ENST00000366159 PODXLO00592 558 aa14.94□□□□□ -0.02
TNFRSF1A-202ENST00000366159 CLDN3O15551 220 aa14.94□□□□□ -0.02
TNFRSF1A-202ENST00000366159 ADRB2P07550 413 aa14.94□□□□□ -0.02
TNFRSF1A-202ENST00000366159 TKTP29401 623 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1A-202ENST00000366159 HOXA9P31269 272 aa14.94□□□□□ -0.02
TNFRSF1A-202ENST00000366159 RPL9P32969 192 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1A-202ENST00000366159 OR1D2P34982 312 aa14.94□□□□□ -0.02
TNFRSF1A-202ENST00000366159 BRCC3P46736 316 aa14.94□□□□□ -0.02
TNFRSF1A-202ENST00000366159 MRPL58Q14197 206 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1A-202ENST00000366159 ZBTB6Q15916 424 aa14.94□□□□□ -0.02
TNFRSF1A-202ENST00000366159 SEZ6Q53EL9 994 aa14.94□□□□□ -0.02
TNFRSF1A-202ENST00000366159 FAM173BQ6P4H8 233 aa14.94□□□□□ -0.02
TNFRSF1A-202ENST00000366159 PRSS33Q8NF86 280 aa14.94□□□□□ -0.02
TNFRSF1A-202ENST00000366159 MYADMQ96S97 322 aa14.94□□□□□ -0.02
TNFRSF1A-202ENST00000366159 MTMR6Q9Y217 621 aa14.94□□□□□ -0.02
TNFRSF1A-202ENST00000366159 DOCK8Q8NF50 2099 aa14.94□□□□□ -0.02
TNFRSF1A-202ENST00000366159 I3L4J1 428 aa14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 TRAPPC3O43617 180 aa14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 POU2F2P09086 479 aa14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 HNRNPA1P09651 372 aaKnown RBP eCLIP14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 AVPR2P30518 371 aa14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 VCPP55072 806 aaKnown RBP14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 GTF2BQ00403 316 aa14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 NHLH1Q02575 133 aa14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 UVSSAQ2YD98 709 aa14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 SPECC1Q5M775 1068 aa14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 SLC8B1Q6J4K2 584 aa14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 SLC39A4Q6P5W5 647 aa14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 ANKS3Q6ZW76 656 aa14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 RTL10Q7L3V2 364 aa14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 LARP4BQ92615 738 aaKnown RBP14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 STAMQ92783 540 aa14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 ST6GALNAC4Q9H4F1 302 aa14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 PLEKHA5Q9HAU0 1116 aa14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 PARVGQ9HBI0 331 aa14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 IGSF9Q9P2J2 1179 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms