RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 COMTP21964 271 aa17.3■□□□□ 0.36
IFT140-201ENST00000361339 MUTP22033 750 aa17.3■□□□□ 0.36
IFT140-201ENST00000361339 SYCE1Q8N0S2 351 aa17.3■□□□□ 0.36
IFT140-201ENST00000361339 EPS8L3Q8TE67 593 aaKnown RBP17.3■□□□□ 0.36
IFT140-201ENST00000361339 TMEM206Q9H813 350 aa17.3■□□□□ 0.36
IFT140-201ENST00000361339 FGFR1OP2Q9NVK5 253 aa17.3■□□□□ 0.36
IFT140-201ENST00000361339 RGS17Q9UGC6 210 aaPredicted RBP17.3■□□□□ 0.36
IFT140-201ENST00000361339 TBX20Q9UMR3 447 aa17.3■□□□□ 0.36
IFT140-201ENST00000361339 HMGCS2P54868 508 aa17.29■□□□□ 0.36
IFT140-201ENST00000361339 MTMR3Q13615 1198 aa17.29■□□□□ 0.36
IFT140-201ENST00000361339 SLC29A2Q14542 456 aa17.29■□□□□ 0.36
IFT140-201ENST00000361339 CYFIP1Q7L576 1253 aa17.29■□□□□ 0.36
IFT140-201ENST00000361339 KCTD17Q8N5Z5 321 aa17.29■□□□□ 0.36
IFT140-201ENST00000361339 MAB21L3Q8N8X9 362 aa17.29■□□□□ 0.36
IFT140-201ENST00000361339 MTMR14Q8NCE2 650 aa17.29■□□□□ 0.36
IFT140-201ENST00000361339 GDAP1Q8TB36 358 aa17.29■□□□□ 0.36
IFT140-201ENST00000361339 ZNF317Q96PQ6 595 aaPredicted RBP17.29■□□□□ 0.36
IFT140-201ENST00000361339 CPSF2Q9P2I0 782 aaKnown RBP17.29■□□□□ 0.36
IFT140-201ENST00000361339 HACL1Q9UJ83 578 aa17.29■□□□□ 0.36
IFT140-201ENST00000361339 CTDP1Q9Y5B0 961 aaPredicted RBP17.29■□□□□ 0.36
IFT140-201ENST00000361339 FGFR4P22455 802 aa17.29■□□□□ 0.36
IFT140-201ENST00000361339 PSMC5P62195 406 aa17.29■□□□□ 0.36
IFT140-201ENST00000361339 SWSAP1Q6NVH7 229 aa17.29■□□□□ 0.36
IFT140-201ENST00000361339 MIS18BP1Q6P0N0 1132 aa17.29■□□□□ 0.36
IFT140-201ENST00000361339 MCF2L2Q86YR7 1114 aa17.29■□□□□ 0.36
IFT140-201ENST00000361339 BHMG1C9JSJ3 638 aaPredicted RBP17.28■□□□□ 0.36
IFT140-201ENST00000361339 GHRP10912 638 aa17.28■□□□□ 0.36
IFT140-201ENST00000361339 FMO1Q01740 532 aa17.28■□□□□ 0.36
IFT140-201ENST00000361339 TAF11Q15544 211 aa17.28■□□□□ 0.36
IFT140-201ENST00000361339 TTC27Q6P3X3 843 aa17.28■□□□□ 0.36
IFT140-201ENST00000361339 MICALL2Q8IY33 904 aa17.28■□□□□ 0.36
IFT140-201ENST00000361339 NEK9Q8TD19 979 aa17.28■□□□□ 0.36
IFT140-201ENST00000361339 CEP170P1Q96L14 293 aa17.28■□□□□ 0.36
IFT140-201ENST00000361339 HMGB2P26583 209 aaKnown RBP17.28■□□□□ 0.36
IFT140-201ENST00000361339 KCNJ1P48048 391 aa17.28■□□□□ 0.36
IFT140-201ENST00000361339 NCKAP1LP55160 1127 aa17.28■□□□□ 0.36
IFT140-201ENST00000361339 SNRNP48Q6IEG0 339 aaKnown RBP17.28■□□□□ 0.36
IFT140-201ENST00000361339 ARMC9Q7Z3E5 817 aa17.28■□□□□ 0.36
IFT140-201ENST00000361339 CCDC26Q8TAB7 109 aa17.28■□□□□ 0.36
IFT140-201ENST00000361339 SLC12A4Q9UP95 1085 aa17.28■□□□□ 0.36
IFT140-201ENST00000361339 NFKBIEO00221 500 aa17.28■□□□□ 0.36
IFT140-201ENST00000361339 NR3C2P08235 984 aa17.28■□□□□ 0.36
IFT140-201ENST00000361339 PYGMP11217 842 aa17.28■□□□□ 0.36
IFT140-201ENST00000361339 ANXA13P27216 316 aa17.28■□□□□ 0.36
IFT140-201ENST00000361339 CCDC60Q8IWA6 550 aaPredicted RBP17.28■□□□□ 0.36
IFT140-201ENST00000361339 C4orf19Q8IY42 314 aa17.28■□□□□ 0.36
IFT140-201ENST00000361339 HELQQ8TDG4 1101 aa17.28■□□□□ 0.36
IFT140-201ENST00000361339 WDR64B1ANS9 1081 aa17.27■□□□□ 0.36
IFT140-201ENST00000361339 H0Y3Z8 333 aa17.27■□□□□ 0.36
IFT140-201ENST00000361339 IRF6O14896 467 aa17.27■□□□□ 0.36
IFT140-201ENST00000361339 CREB1P16220 341 aa17.27■□□□□ 0.36
IFT140-201ENST00000361339 GMPSP49915 693 aaPredicted RBP17.27■□□□□ 0.36
IFT140-201ENST00000361339 NCALDP61601 193 aa17.27■□□□□ 0.36
IFT140-201ENST00000361339 DENND2CQ68D51 928 aa17.27■□□□□ 0.36
IFT140-201ENST00000361339 SPOPLQ6IQ16 392 aa17.27■□□□□ 0.36
IFT140-201ENST00000361339 TAS1R3Q7RTX0 852 aa17.27■□□□□ 0.36
IFT140-201ENST00000361339 C1orf131Q8NDD1 294 aaKnown RBP17.27■□□□□ 0.36
IFT140-201ENST00000361339 L3MBTL3Q96JM7 780 aaPredicted RBP17.27■□□□□ 0.36
IFT140-201ENST00000361339 FAM213AQ9BRX8 229 aa17.27■□□□□ 0.36
IFT140-201ENST00000361339 SEMA4AQ9H3S1 761 aa17.27■□□□□ 0.36
IFT140-201ENST00000361339 KCNK9Q9NPC2 374 aa17.27■□□□□ 0.36
IFT140-201ENST00000361339 KMT5AQ9NQR1 393 aa17.27■□□□□ 0.36
IFT140-201ENST00000361339 TBC1D22BQ9NU19 505 aa17.27■□□□□ 0.36
IFT140-201ENST00000361339 PTPN22Q9Y2R2 807 aa17.27■□□□□ 0.36
IFT140-201ENST00000361339 TCP11X1B4DZS4 312 aa17.27■□□□□ 0.35
IFT140-201ENST00000361339 CFHP08603 1231 aa17.27■□□□□ 0.35
IFT140-201ENST00000361339 SEZ6Q53EL9 994 aa17.27■□□□□ 0.35
IFT140-201ENST00000361339 ANKRD20A2Q5SQ80 823 aa17.27■□□□□ 0.35
IFT140-201ENST00000361339 ANKRD20A1Q5TYW2 823 aa17.27■□□□□ 0.35
IFT140-201ENST00000361339 ANKRD20A3Q5VUR7 823 aa17.27■□□□□ 0.35
IFT140-201ENST00000361339 FAM71AQ8IYT1 594 aa17.27■□□□□ 0.35
IFT140-201ENST00000361339 C3orf20Q8ND61 904 aa17.27■□□□□ 0.35
IFT140-201ENST00000361339 POMGNT1Q8WZA1 660 aa17.27■□□□□ 0.35
IFT140-201ENST00000361339 SH3GL3Q99963 347 aa17.27■□□□□ 0.35
IFT140-201ENST00000361339 OSBPL1AQ9BXW6 950 aa17.27■□□□□ 0.35
IFT140-201ENST00000361339 XPNPEP1Q9NQW7 623 aa17.27■□□□□ 0.35
IFT140-201ENST00000361339 DNAJC17Q9NVM6 304 aaKnown RBP17.27■□□□□ 0.35
IFT140-201ENST00000361339 SMNDC1O75940 238 aaKnown RBP eCLIP17.26■□□□□ 0.35
IFT140-201ENST00000361339 RARAP10276 462 aa17.26■□□□□ 0.35
IFT140-201ENST00000361339 ABL2P42684 1182 aa17.26■□□□□ 0.35
IFT140-201ENST00000361339 DR1Q01658 176 aa17.26■□□□□ 0.35
IFT140-201ENST00000361339 NUGGCQ68CJ6 796 aa17.26■□□□□ 0.35
IFT140-201ENST00000361339 PRELID2Q8N945 189 aa17.26■□□□□ 0.35
IFT140-201ENST00000361339 LPAR1Q92633 364 aa17.26■□□□□ 0.35
IFT140-201ENST00000361339 RNF25Q96BH1 459 aaPredicted RBP17.26■□□□□ 0.35
IFT140-201ENST00000361339 SRRM3A6NNA2 597 aaPredicted RBP17.26■□□□□ 0.35
IFT140-201ENST00000361339 CCDC188H7C350 402 aa17.26■□□□□ 0.35
IFT140-201ENST00000361339 KIF3CO14782 793 aa17.26■□□□□ 0.35
IFT140-201ENST00000361339 STBD1O95210 358 aa17.26■□□□□ 0.35
IFT140-201ENST00000361339 ZBTB41Q5SVQ8 909 aa17.26■□□□□ 0.35
IFT140-201ENST00000361339 SV2AQ7L0J3 742 aa17.26■□□□□ 0.35
IFT140-201ENST00000361339 FBXO25Q8TCJ0 367 aa17.26■□□□□ 0.35
IFT140-201ENST00000361339 ATXN2LQ8WWM7 1075 aaKnown RBP17.26■□□□□ 0.35
IFT140-201ENST00000361339 NUP85Q9BW27 656 aa17.26■□□□□ 0.35
IFT140-201ENST00000361339 CNOT10Q9H9A5 744 aaKnown RBP17.26■□□□□ 0.35
IFT140-201ENST00000361339 SEPT9Q9UHD8 586 aaPredicted RBP17.26■□□□□ 0.35
IFT140-201ENST00000361339 PAEPP09466 180 aa17.25■□□□□ 0.35
IFT140-201ENST00000361339 KRT5P13647 590 aa17.25■□□□□ 0.35
IFT140-201ENST00000361339 CYP11B1P15538 503 aa17.25■□□□□ 0.35
IFT140-201ENST00000361339 PMS2P54278 862 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms