RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 PLXNB2O15031 1838 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 ENC1O14682 589 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 AREL1O15033 823 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 PSTPIP1O43586 416 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 CCDC22O60826 627 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 HIP1RO75146 1068 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 TOMM70O94826 608 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 PSMG1O95456 288 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 PYGBP11216 843 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 CPOXP36551 454 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 STAT6P42226 847 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 TUBP50607 506 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 NR5A1Q13285 461 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 SNAPC2Q13487 334 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 SLC35G1Q2M3R5 365 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 DNAL1Q4LDG9 190 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 HERC4Q5GLZ8 1057 aaPredicted RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 LRRC74BQ6ZQY2 392 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 MIGA2Q7L4E1 593 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 ZNF571Q7Z3V5 609 aaPredicted RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 FAM172AQ8WUF8 416 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 NUP133Q8WUM0 1156 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 MARVELD3Q96A59 401 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 DGCR14Q96DF8 476 aaKnown RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 MIPEPQ99797 713 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 TUBA1CQ9BQE3 449 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 AP1M1Q9BXS5 423 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 IQCGQ9H095 443 aaKnown RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 KCNK4Q9NYG8 393 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 TMEM9Q9P0T7 183 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 NKX1-2Q9UD57 310 aaPredicted RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 DNAJC12Q9UKB3 198 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 MTO1Q9Y2Z2 717 aaKnown RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 FARP1Q9Y4F1 1045 aaPredicted RBP4.82□□□□□ -1.64
PTPN22-201ENST00000359785 ZHX2Q9Y6X8 837 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 SCN8AQ9UQD0 1980 aa4.82□□□□□ -1.64
PTPN22-201ENST00000359785 FRMPD3Q5JV73 1810 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 A0A087X0T9 212 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 CTNND1O60716 968 aaKnown RBP4.81□□□□□ -1.64
PTPN22-201ENST00000359785 SPAG6O75602 509 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 TM7SF2O76062 418 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 BAIAP3O94812 1187 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 BMP10O95393 424 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 CHGBP05060 677 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 LYNP07948 512 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 FAM228BP0C875 321 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 GAP43P17677 238 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 TRIM21P19474 475 aaKnown RBP4.81□□□□□ -1.64
PTPN22-201ENST00000359785 ABCD1P33897 745 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 MAGEA12P43365 314 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 CASP5P51878 434 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 DR1Q01658 176 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 NAB1Q13506 487 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 UBE4AQ14139 1066 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 PRKD1Q15139 912 aaPredicted RBP4.81□□□□□ -1.64
PTPN22-201ENST00000359785 LRRC24Q50LG9 513 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 TEX44Q53QW1 395 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 CCDC181Q5TID7 509 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 SNX30Q5VWJ9 437 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 OTUD7BQ6GQQ9 843 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 C3orf67Q6ZVT6 689 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 LIMS2Q7Z4I7 341 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 FBXO33Q7Z6M2 555 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 GRAMD1CQ8IYS0 662 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 ANKRD13AQ8IZ07 590 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 SDR16C5Q8N3Y7 309 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 FNDC8Q8TC99 324 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 ZNF653Q96CK0 615 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 KRT12Q99456 494 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 YTHDF1Q9BYJ9 559 aaKnown RBP4.81□□□□□ -1.64
PTPN22-201ENST00000359785 PRDM16Q9HAZ2 1276 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 INTS9Q9NV88 658 aaKnown RBP4.81□□□□□ -1.64
PTPN22-201ENST00000359785 C6orf203Q9P0P8 240 aaPredicted RBP4.81□□□□□ -1.64
PTPN22-201ENST00000359785 MTRF1LQ9UGC7 380 aaKnown RBP4.81□□□□□ -1.64
PTPN22-201ENST00000359785 SHOC2Q9UQ13 582 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 MGAMO43451 1857 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 DCDC2CA8MYV0 355 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 PIK3CDO00329 1044 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 VILLO15195 856 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 IDH3BO43837 385 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 NTRK1P04629 796 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 ZNF12P17014 697 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 STIP1P31948 543 aaKnown RBP4.81□□□□□ -1.64
PTPN22-201ENST00000359785 GALNT2Q10471 571 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 STK4Q13043 487 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 FXNQ16595 210 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 ZNF827Q17R98 1081 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 ADGRD1Q6QNK2 874 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 MPRIPQ6WCQ1 1025 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 CATIPQ7Z7H3 387 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 ZNF554Q86TJ5 538 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 ERI1Q8IV48 349 aaKnown RBP4.81□□□□□ -1.64
PTPN22-201ENST00000359785 CATSPER1Q8NEC5 780 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.81□□□□□ -1.64
PTPN22-201ENST00000359785 LNX1Q8TBB1 728 aaPredicted RBP4.81□□□□□ -1.64
PTPN22-201ENST00000359785 RBM46Q8TBY0 533 aaKnown RBP4.81□□□□□ -1.64
PTPN22-201ENST00000359785 FIZ1Q96SL8 496 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 NDNQ99608 321 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 TSG101Q99816 390 aa4.81□□□□□ -1.64
PTPN22-201ENST00000359785 TRAIPQ9BWF2 469 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms