RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 ITFG1Q8TB96 612 aa9.49□□□□□ -0.89
COL4A3BP-202ENST00000357457 PIGOQ8TEQ8 1089 aa9.49□□□□□ -0.89
COL4A3BP-202ENST00000357457 MTMR9Q96QG7 549 aa9.49□□□□□ -0.89
COL4A3BP-202ENST00000357457 BCO2Q9BYV7 579 aa9.49□□□□□ -0.89
COL4A3BP-202ENST00000357457 POLR3FQ9H1D9 316 aaPredicted RBP9.49□□□□□ -0.89
COL4A3BP-202ENST00000357457 TTC12Q9H892 705 aaPredicted RBP9.49□□□□□ -0.89
COL4A3BP-202ENST00000357457 AVENQ9NQS1 362 aaPredicted RBP9.49□□□□□ -0.89
COL4A3BP-202ENST00000357457 PDRG1Q9NUG6 133 aa9.49□□□□□ -0.89
COL4A3BP-202ENST00000357457 SNTG2Q9NY99 539 aa9.49□□□□□ -0.89
COL4A3BP-202ENST00000357457 PCDHGA2Q9Y5H1 932 aa9.49□□□□□ -0.89
COL4A3BP-202ENST00000357457 FAM205CA6NFA0 338 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 CASTOR2A6NHX0 329 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 SHISA7A6NL88 538 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 FAM170BA6NMN3 283 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 TMEM189-UBE2V1I3L0A0 370 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 ACKR2O00590 384 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 SPTLC1O15269 473 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 LAMTOR5O43504 91 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 FDPSP14324 419 aaKnown RBP9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 FGFR3P22607 806 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 RBM25P49756 843 aaKnown RBP9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 CALCRLQ16602 461 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 VARS2Q5ST30 1063 aaKnown RBP9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 AXDND1Q5T1B0 1012 aaPredicted RBP9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 CD300LGQ6UXG3 332 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 CEP57Q86XR8 500 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 GPR161Q8N6U8 529 aaKnown RBP9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 MCPH1Q8NEM0 835 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 NELL2Q99435 816 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 CXCL16Q9H2A7 254 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 PDZD7Q9H5P4 517 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 LTB4R2Q9NPC1 389 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 GPRC5CQ9NQ84 441 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 GDE1Q9NZC3 331 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 DNMT3BQ9UBC3 853 aaKnown RBP9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 ORC3Q9UBD5 711 aaPredicted RBP9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 MTRRQ9UBK8 725 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 TPCN1Q9ULQ1 816 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 BACE2Q9Y5Z0 518 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 COL4A3Q01955 1670 aa9.48□□□□□ -0.89
COL4A3BP-202ENST00000357457 A0A087WWV3 80 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 LRRIQ4A6NIV6 560 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 N4BP3O15049 544 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 CCL16O15467 120 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 LILRB5O75023 590 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 ECI2O75521 394 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 RECQL4O94761 1208 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 SDHBP21912 280 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 TGM1P22735 817 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 OR1D2P34982 312 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 KRT2P35908 639 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 RPS9P46781 194 aaKnown RBP9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 CSTF1Q05048 431 aaKnown RBP9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 DSG2Q14126 1118 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 RSPO4Q2I0M5 234 aaPredicted RBP9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 ZBTB41Q5SVQ8 909 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 CATSPER3Q86XQ3 398 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 ZBTB8OSQ8IWT0 167 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 NPAS3Q8IXF0 933 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 ZNF687Q8N1G0 1237 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 SLC7A14Q8TBB6 771 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 HASPINQ8TF76 798 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 ATRIPQ8WXE1 791 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 WASF1Q92558 559 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 PPP1R10Q96QC0 940 aaKnown RBP9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 HINFPQ9BQA5 517 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 CCDC113Q9H0I3 377 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 C2orf40Q9H1Z8 148 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 SPATA6Q9NWH7 488 aaPredicted RBP9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 HCFC1R1Q9NWW0 138 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 ZSCAN32Q9NX65 697 aa9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 CNOT1A5YKK6 2376 aaKnown RBP9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 KMT2BQ9UMN6 2715 aaPredicted RBP9.47□□□□□ -0.89
COL4A3BP-202ENST00000357457 ARHGEF37A1IGU5 675 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 WNT7AO00755 349 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 NCAM2O15394 837 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 USO1O60763 962 aaKnown RBP9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 ABLIM3O94929 683 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 EDN1P05305 212 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 ATP2B1P20020 1258 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 CD72P21854 359 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 IGFBP6P24592 240 aaPredicted RBP9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 TARSP26639 723 aaKnown RBP9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 TXKP42681 527 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 PRPF4BQ13523 1007 aaKnown RBP9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 UBXN2BQ14CS0 331 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 MAPK6Q16659 721 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 UPP1Q16831 310 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 PABPC1LQ4VXU2 614 aaKnown RBP9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 ALKAL1Q6UXT8 129 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 ZNF852Q6ZMS4 543 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 MAEAQ7L5Y9 396 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 NOSTRINQ8IVI9 506 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 PLPP6Q8IY26 295 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 BSNDQ8WZ55 320 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 ELSPBP1Q96BH3 223 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 NACC1Q96RE7 527 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 KXD1Q9BQD3 176 aa9.46□□□□□ -0.9
COL4A3BP-202ENST00000357457 POLR3CQ9BUI4 534 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms