RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 KCND2Q9NZV8 630 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 B2RBV5 119 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 EIF3DO15371 548 aaKnown RBP eCLIP16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 ATMINO43313 823 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 CAND2O75155 1236 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 CYP11B2P19099 503 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 ALDH18A1P54886 795 aaKnown RBP16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 SNRNP35Q16560 246 aaKnown RBP16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 CDKL3Q8IVW4 592 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 SENP7Q9BQF6 1050 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 THAP2Q9H0W7 228 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 POLR3FQ9H1D9 316 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 PCDHB2Q9Y5E7 798 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 CHD1O14646 1710 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 RARGP13631 454 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 NQO1P15559 274 aaKnown RBP16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 GPC3P51654 580 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 GPSM2P81274 684 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 ITIH4Q14624 930 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 CRYMQ14894 314 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 LDHDQ86WU2 507 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 FAM167AQ96KS9 214 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 ACAP3Q96P50 834 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 JMJD4Q9H9V9 463 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 RNF146Q9NTX7 359 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 DAGLAQ9Y4D2 1042 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 STXBP2Q15833 593 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 RC3H1Q5TC82 1133 aaKnown RBP16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 C1orf228Q6PIY5 440 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 C4orf50Q6ZRC1 276 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 HDAC7Q8WUI4 952 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 WARS2Q9UGM6 360 aaKnown RBP16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 GTF3C4Q9UKN8 822 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 ZBBXA8MT70 800 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 PON1P27169 355 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 YWHABP31946 246 aaKnown RBP16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 AARSP49588 968 aaKnown RBP eCLIP16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 STX3Q13277 289 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 LRRC36Q1X8D7 754 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 LVRNQ6Q4G3 990 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 SKA2Q8WVK7 121 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 KLF6Q99612 283 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 FAM118BQ9BPY3 351 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 ZSWIM1Q9BR11 485 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 THTPAQ9BU02 230 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 SPC25Q9HBM1 224 aa16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 MTO1Q9Y2Z2 717 aaKnown RBP16.47■□□□□ 0.23
TRAPPC11-202ENST00000357207 RANBP1P43487 201 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 MEI1Q5TIA1 1274 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 FOXR1Q6PIV2 292 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 C3orf62Q6ZUJ4 267 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 SCG3Q8WXD2 468 aaKnown RBP16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 ARHGEF1Q92888 912 aaKnown RBP16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 TIPINQ9BVW5 301 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 DLGAP2Q9P1A6 1054 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 MARCOQ9UEW3 520 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 CHORDC1Q9UHD1 332 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 SALL1Q9NSC2 1324 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 USP32Q8NFA0 1604 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 P4HA2O15460 535 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 ANP32DO95626 131 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 PMLP29590 882 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 ACTR2P61160 394 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 MDH1BQ5I0G3 518 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 BTNL9Q6UXG8 535 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 EPS8L3Q8TE67 593 aaKnown RBP16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 C18orf8Q96DM3 657 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 ZFATQ9P243 1243 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 MAD2L2Q9UI95 211 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 NDUFB10O96000 172 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 COL3A1P02461 1466 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 AP3M2P53677 418 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 GRAMD4Q6IC98 578 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 EXT2Q93063 718 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 MASTLQ96GX5 879 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 ING2Q9H160 280 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 DHX35Q9H5Z1 703 aaKnown RBP16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 BAZ2BQ9UIF8 2168 aaKnown RBP16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 SUGT1Q9Y2Z0 365 aa16.46■□□□□ 0.23
TRAPPC11-202ENST00000357207 SLC37A4O43826 429 aa16.46■□□□□ 0.22
TRAPPC11-202ENST00000357207 APRTP07741 180 aa16.46■□□□□ 0.22
TRAPPC11-202ENST00000357207 PAMP19021 973 aa16.46■□□□□ 0.22
TRAPPC11-202ENST00000357207 PMS1P54277 932 aaKnown RBP16.46■□□□□ 0.22
TRAPPC11-202ENST00000357207 CATSPER3Q86XQ3 398 aa16.46■□□□□ 0.22
TRAPPC11-202ENST00000357207 SULF1Q8IWU6 871 aa16.46■□□□□ 0.22
TRAPPC11-202ENST00000357207 KCTD17Q8N5Z5 321 aa16.46■□□□□ 0.22
TRAPPC11-202ENST00000357207 RAB6BQ9NRW1 208 aa16.46■□□□□ 0.22
TRAPPC11-202ENST00000357207 ZSCAN5CA6NGD5 496 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 OSBPP22059 807 aa16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 ZNF200P98182 395 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 PKN1Q16512 942 aa16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 PACS2Q86VP3 889 aa16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 GIPC2Q8TF65 315 aa16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 TLR10Q9BXR5 811 aa16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 ZC3H7BQ9UGR2 993 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 CPSF3Q9UKF6 684 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 LRRC10BA6NIK2 292 aa16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 PAPOLAP51003 745 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 CENPCQ03188 943 aa16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 MOV10L1Q9BXT6 1211 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms