RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 ZNF568Q3ZCX4 644 aa11.69□□□□□ -0.54
CAPN3-204ENST00000356316 GLRA4Q5JXX5 417 aa11.69□□□□□ -0.54
CAPN3-204ENST00000356316 AXDND1Q5T1B0 1012 aaPredicted RBP11.69□□□□□ -0.54
CAPN3-204ENST00000356316 RINT1Q6NUQ1 792 aa11.69□□□□□ -0.54
CAPN3-204ENST00000356316 GRASPQ7Z6J2 395 aaPredicted RBP11.69□□□□□ -0.54
CAPN3-204ENST00000356316 KCTD17Q8N5Z5 321 aa11.69□□□□□ -0.54
CAPN3-204ENST00000356316 RSAD2Q8WXG1 361 aa11.69□□□□□ -0.54
CAPN3-204ENST00000356316 RNF25Q96BH1 459 aaPredicted RBP11.69□□□□□ -0.54
CAPN3-204ENST00000356316 MYADMQ96S97 322 aa11.69□□□□□ -0.54
CAPN3-204ENST00000356316 ACO2Q99798 780 aaKnown RBP11.69□□□□□ -0.54
CAPN3-204ENST00000356316 CXCL16Q9H2A7 254 aa11.69□□□□□ -0.54
CAPN3-204ENST00000356316 SMIM28A0A1B0GU29 152 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 SFI1A8K8P3 1242 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 TMEM189-UBE2V1I3L0A0 370 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 RIOK3O14730 519 aaKnown RBP11.68□□□□□ -0.54
CAPN3-204ENST00000356316 ATMINO43313 823 aaPredicted RBP11.68□□□□□ -0.54
CAPN3-204ENST00000356316 NARSO43776 548 aaKnown RBP11.68□□□□□ -0.54
CAPN3-204ENST00000356316 GFRA3O60609 400 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 N4BP1O75113 896 aaKnown RBP11.68□□□□□ -0.54
CAPN3-204ENST00000356316 PAPLNO95428 1278 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 EDN1P05305 212 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 SRFP11831 508 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 AOC1P19801 751 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 FGFR3P22607 806 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 ELF1P32519 619 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 MATR3P43243 847 aaKnown RBP eCLIP11.68□□□□□ -0.54
CAPN3-204ENST00000356316 RAB33AQ14088 237 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 NAB2Q15742 525 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 UPP1Q16831 310 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 C8orf34Q49A92 452 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 ANKS3Q6ZW76 656 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 RTL10Q7L3V2 364 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 PPP1R10Q96QC0 940 aaKnown RBP11.68□□□□□ -0.54
CAPN3-204ENST00000356316 TARS2Q9BW92 718 aaKnown RBP11.68□□□□□ -0.54
CAPN3-204ENST00000356316 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.68□□□□□ -0.54
CAPN3-204ENST00000356316 FBXW11Q9UKB1 542 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 NUB1Q9Y5A7 615 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 CDY1Q9Y6F8 540 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 TRIP11Q15643 1979 aa11.68□□□□□ -0.54
CAPN3-204ENST00000356316 VWA3AA6NCI4 1184 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 SLC16A4O15374 487 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 CCL16O15467 120 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 MCF2P10911 925 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 HARSP12081 509 aaKnown RBP11.67□□□□□ -0.54
CAPN3-204ENST00000356316 GUCY2CP25092 1073 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 GJB2P29033 226 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 HOXA9P31269 272 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 RPL9P32969 192 aaKnown RBP11.67□□□□□ -0.54
CAPN3-204ENST00000356316 MCM2P49736 904 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 RAD51AP2Q09MP3 1159 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 PDAP1Q13442 181 aaKnown RBP11.67□□□□□ -0.54
CAPN3-204ENST00000356316 IL17AQ16552 155 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 MPZL3Q6UWV2 235 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 C1orf186Q6ZWK4 172 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 MTSS1LQ765P7 747 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 SYT2Q8N9I0 419 aaPredicted RBP11.67□□□□□ -0.54
CAPN3-204ENST00000356316 SLC7A14Q8TBB6 771 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 PLIN2Q99541 437 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 NTPCRQ9BSD7 190 aaKnown RBP11.67□□□□□ -0.54
CAPN3-204ENST00000356316 RUSC1Q9BVN2 902 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 CDT1Q9H211 546 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 KCND2Q9NZV8 630 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 CA14Q9ULX7 337 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 SMC3Q9UQE7 1217 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.67□□□□□ -0.54
CAPN3-204ENST00000356316 BACE2Q9Y5Z0 518 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 MYH11P35749 1972 aa11.67□□□□□ -0.54
CAPN3-204ENST00000356316 ANHXE9PGG2 379 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 H0YCG3 227 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 H7C4K7 107 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 I3L4J1 428 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 PRRG1O14668 218 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 CLDN3O15551 220 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 PI15O43692 258 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 PLS3P13797 630 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 NPR3P17342 541 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 TKTP29401 623 aaKnown RBP11.66□□□□□ -0.54
CAPN3-204ENST00000356316 MARCKSP29966 332 aaPredicted RBP11.66□□□□□ -0.54
CAPN3-204ENST00000356316 UBA7P41226 1012 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 ATP2C1P98194 919 aaPredicted RBP11.66□□□□□ -0.54
CAPN3-204ENST00000356316 XKR4Q5GH76 650 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 ARL6IP4Q66PJ3 421 aaKnown RBP11.66□□□□□ -0.54
CAPN3-204ENST00000356316 ALKAL1Q6UXT8 129 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 DAW1Q8N136 415 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 CEP120Q8N960 986 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 SPIRE2Q8WWL2 714 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 BICD1Q96G01 975 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 CALML4Q96GE6 196 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 SHDQ96IW2 340 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 TMX3Q96JJ7 454 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 GOLGA2P5Q9HBQ8 144 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 PTPRHQ9HD43 1115 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 LARSQ9P2J5 1176 aaKnown RBP11.66□□□□□ -0.54
CAPN3-204ENST00000356316 ARHGAP28Q9P2N2 729 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 MTRRQ9UBK8 725 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 CDH7Q9ULB5 785 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 NUMBLQ9Y6R0 609 aa11.66□□□□□ -0.54
CAPN3-204ENST00000356316 ZDBF2Q9HCK1 2354 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 PIEZO1Q92508 2521 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 PODXLO00592 558 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms