RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 MYL3P08590 195 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 SLC16A1P53985 500 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 PSMC6P62333 389 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 ALCAMQ13740 583 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 SLFN12LQ6IEE8 588 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 MICU2Q8IYU8 434 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 DCPSQ96C86 337 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 SLITRK6Q9H5Y7 841 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 POLE3Q9NRF9 147 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 UBAP1Q9NZ09 502 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 TBX22Q9Y458 520 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 SUPT3HB4E1H0 165 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 AP3B1O00203 1094 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 MYL2P10916 166 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 SOAT1P35610 550 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 EIF2B2P49770 351 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 SESN2P58004 480 aaPredicted RBP11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 C6orf10Q5SRN2 563 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 CENPPQ6IPU0 288 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 SPATA4Q8NEY3 305 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 ORAI2Q96SN7 254 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 KDM6BO15054 1643 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 ZBTB39O15060 712 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 MOCS2O96007 188 aaPredicted RBP11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 RECQLP46063 649 aaPredicted RBP11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 RCN1Q15293 331 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 ASIC4Q96FT7 647 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 AGAP3Q96P47 875 aa11.6□□□□□ -0.55
GTF3C1-201ENST00000356183 PRDM15P57071 1507 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 MYO5CQ9NQX4 1742 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 DNALI1O14645 258 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 SLC16A4O15374 487 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 MRPS35P82673 323 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 WLSQ5T9L3 541 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 POTEAQ6S8J7 498 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 CCNI2Q6ZMN8 369 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 TMEM35BQ8NCS4 154 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 FUT8Q9BYC5 575 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 ARHGAP31Q2M1Z3 1444 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 ZNF804BA4D1E1 1349 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 POTEMA6NI47 508 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 BMP3P12645 472 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 MFN1Q8IWA4 741 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 IRX2Q9BZI1 471 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 TASP1Q9H6P5 420 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 PAPOLBQ9NRJ5 636 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 SMARCAL1Q9NZC9 954 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 CLASP1Q7Z460 1538 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 IFNAR1P17181 557 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 LSP1P33241 339 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 RHOT1Q8IXI2 618 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 TRIM10Q9UDY6 481 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 KCNK16Q96T55 309 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 TRIM54Q9BYV2 358 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 FAM153AQ9UHL3 310 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 PDZK1P1A8MUH7 402 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 LDHAP00338 332 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 MYCP01106 439 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 CAPN1P07384 714 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 NFKBIAP25963 317 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 NUP62P37198 522 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 CACNB2Q08289 660 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 FAM98CQ17RN3 349 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 AKIRIN2Q53H80 203 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 KIRREL3Q8IZU9 778 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 SNX31Q8N9S9 440 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 ZNF579Q8NAF0 562 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 DPF2Q92785 391 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 RMDN1Q96DB5 314 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 CEP95Q96GE4 821 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 SPRTNQ9H040 489 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 GPBP1L1Q9HC44 474 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 LCMT1Q9UIC8 334 aa11.59□□□□□ -0.55
GTF3C1-201ENST00000356183 ALBP02768 609 aa11.58□□□□□ -0.55
GTF3C1-201ENST00000356183 FOSL2P15408 326 aa11.58□□□□□ -0.55
GTF3C1-201ENST00000356183 ATP1A4Q13733 1029 aa11.58□□□□□ -0.55
GTF3C1-201ENST00000356183 ZCWPW2Q504Y3 356 aa11.58□□□□□ -0.55
GTF3C1-201ENST00000356183 LRIG3Q6UXM1 1119 aa11.58□□□□□ -0.55
GTF3C1-201ENST00000356183 NSL1Q96IY1 281 aa11.58□□□□□ -0.55
GTF3C1-201ENST00000356183 RNPC3Q96LT9 517 aaKnown RBP11.58□□□□□ -0.55
GTF3C1-201ENST00000356183 DMAP1Q9NPF5 467 aaPredicted RBP11.58□□□□□ -0.55
GTF3C1-201ENST00000356183 MPP6Q9NZW5 540 aa11.58□□□□□ -0.55
GTF3C1-201ENST00000356183 HOXA7P31268 230 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 CDH6P55285 790 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 ITPRIPL1Q6GPH6 555 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 PLEKHA7Q6IQ23 1121 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 XPO6Q96QU8 1125 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 FAM49AQ9H0Q0 323 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 PNMA6FA0A0J9YX94 578 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 CCT8L1PA6NM43 557 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 TRIM49P0CI25 452 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 TRIM49CP0CI26 452 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 EIF2AK2P19525 551 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 FAM102AQ5T9C2 384 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 SIK2Q9H0K1 926 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 PARVAQ9NVD7 372 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 SPATA2Q9UM82 520 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 TTC37Q6PGP7 1564 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 HNRNPRO43390 633 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 ALDH6A1Q02252 535 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 900.1 ms