RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 ATP11BQ9Y2G3 1177 aa11.9□□□□□ -0.5
FN1-204ENST00000356005 ATP8A1Q9Y2Q0 1164 aa11.9□□□□□ -0.5
FN1-204ENST00000356005 DLG5Q8TDM6 1919 aa11.9□□□□□ -0.5
FN1-204ENST00000356005 EXTL3O43909 919 aa11.9□□□□□ -0.5
FN1-204ENST00000356005 ACAD11Q709F0 780 aa11.9□□□□□ -0.5
FN1-204ENST00000356005 DNAJC17Q9NVM6 304 aaKnown RBP11.9□□□□□ -0.5
FN1-204ENST00000356005 ZNF521Q96K83 1311 aa11.9□□□□□ -0.5
FN1-204ENST00000356005 RTN2O75298 545 aa11.9□□□□□ -0.5
FN1-204ENST00000356005 SRGNP10124 158 aa11.9□□□□□ -0.5
FN1-204ENST00000356005 ATP6V0D2Q8N8Y2 350 aa11.9□□□□□ -0.5
FN1-204ENST00000356005 TAF6P49848 677 aa11.9□□□□□ -0.5
FN1-204ENST00000356005 RAB27AP51159 221 aa11.9□□□□□ -0.5
FN1-204ENST00000356005 NLRP11P59045 1033 aaKnown RBP11.9□□□□□ -0.5
FN1-204ENST00000356005 DRAP1Q14919 205 aaPredicted RBP11.9□□□□□ -0.5
FN1-204ENST00000356005 SPDL1Q96EA4 605 aa11.9□□□□□ -0.5
FN1-204ENST00000356005 NRBF2Q96F24 287 aa11.9□□□□□ -0.5
FN1-204ENST00000356005 ASPSCR1Q9BZE9 553 aa11.9□□□□□ -0.5
FN1-204ENST00000356005 HMGB3O15347 200 aaKnown RBP11.9□□□□□ -0.51
FN1-204ENST00000356005 SYNCRIPO60506 623 aaKnown RBP11.9□□□□□ -0.51
FN1-204ENST00000356005 EFCAB14O75071 495 aa11.9□□□□□ -0.51
FN1-204ENST00000356005 NOGQ13253 232 aa11.9□□□□□ -0.51
FN1-204ENST00000356005 BBS9Q3SYG4 887 aa11.9□□□□□ -0.51
FN1-204ENST00000356005 TEKT4Q8WW24 435 aa11.9□□□□□ -0.51
FN1-204ENST00000356005 TSPAN17Q96FV3 270 aa11.9□□□□□ -0.51
FN1-204ENST00000356005 BPIFA3Q9BQP9 254 aa11.9□□□□□ -0.51
FN1-204ENST00000356005 NEUROG2Q9H2A3 272 aa11.9□□□□□ -0.51
FN1-204ENST00000356005 FGFR1OP2Q9NVK5 253 aa11.9□□□□□ -0.51
FN1-204ENST00000356005 VPS9D1Q9Y2B5 631 aa11.9□□□□□ -0.51
FN1-204ENST00000356005 E9PMD0 336 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 ANP32DO95626 131 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 OCM2P0CE71 109 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 OCMP0CE72 109 aaPredicted RBP11.89□□□□□ -0.51
FN1-204ENST00000356005 GNL1P36915 607 aaPredicted RBP11.89□□□□□ -0.51
FN1-204ENST00000356005 STAG2Q8N3U4 1231 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 RAPGEF5Q92565 580 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 ZMYND12Q9H0C1 365 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 UNC45AQ9H3U1 944 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 ADGRB2O60241 1585 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 PLSCR1O15162 318 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 MAP3K13O43283 966 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 AKT1P31749 480 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 PRCPP42785 496 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 CDH6P55285 790 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 TSGA10IPQ3SY00 556 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 FSCBQ5H9T9 825 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 HPDLQ96IR7 371 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 UBA6A0AVT1 1052 aaPredicted RBP11.89□□□□□ -0.51
FN1-204ENST00000356005 C2CD2LO14523 706 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 HIST1H2AGP0C0S8 130 aaPredicted RBP11.89□□□□□ -0.51
FN1-204ENST00000356005 HIST1H2ADP20671 130 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 OSCP1Q8WVF1 389 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 HIST1H2AHQ96KK5 128 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 GDAP1L1Q96MZ0 367 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 HIST1H2AJQ99878 128 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 H2AFJQ9BTM1 129 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 ADAMTS1Q9UHI8 967 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 TUBE1Q9UJT0 475 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 ALDH2P05091 517 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 ATICP31939 592 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 TCF7P36402 384 aaPredicted RBP11.89□□□□□ -0.51
FN1-204ENST00000356005 MUM1Q2TAK8 710 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 SLC35F6Q8N357 371 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 EHD4Q9H223 541 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 PLEKHA4Q9H4M7 779 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 HSPBP1Q9NZL4 362 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 ZNF609O15014 1411 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 C3orf70A6NLC5 250 aaPredicted RBP11.89□□□□□ -0.51
FN1-204ENST00000356005 ATG9AQ7Z3C6 839 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 SLC7A14Q8TBB6 771 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 AIFM3Q96NN9 605 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 CPVLQ9H3G5 476 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 VTA1Q9NP79 307 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 SENP1Q9P0U3 644 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 A0A1B0GUA9 196 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 CABYRO75952 493 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 TDP2O95551 362 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 RGS4P49798 205 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 OXCT1P55809 520 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 CDH18Q13634 790 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 TRADDQ15628 312 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 SRBD1Q8N5C6 995 aaKnown RBP11.89□□□□□ -0.51
FN1-204ENST00000356005 MRPL9Q9BYD2 267 aaKnown RBP11.89□□□□□ -0.51
FN1-204ENST00000356005 FAM129AQ9BZQ8 928 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 TRIM17Q9Y577 477 aa11.89□□□□□ -0.51
FN1-204ENST00000356005 PIK3R2O00459 728 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 THP07101 528 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 ETFBP38117 255 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 RPS6P62753 249 aaKnown RBP11.88□□□□□ -0.51
FN1-204ENST00000356005 FKBP1BP68106 108 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 PRAMEF18Q5VWM3 479 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 HERC6Q8IVU3 1022 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 ZNF668Q96K58 619 aaPredicted RBP11.88□□□□□ -0.51
FN1-204ENST00000356005 YIPF2Q9BWQ6 316 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 G3BP2Q9UN86 482 aaKnown RBP11.88□□□□□ -0.51
FN1-204ENST00000356005 ADAMTS13Q76LX8 1427 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 ARHGAP23Q9P227 1491 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 NEURL4Q96JN8 1562 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 TWF1Q12792 350 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 CAPRIN1Q14444 709 aaKnown RBP11.88□□□□□ -0.51
FN1-204ENST00000356005 FKBP1CQ5VVH2 108 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms