RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 SNRNP35Q16560 246 aaKnown RBP14.92□□□□□ -0.02
SREBF1-202ENST00000355815 C4orf33Q8N1A6 199 aa14.92□□□□□ -0.02
SREBF1-202ENST00000355815 NLRP7Q8WX94 980 aa14.92□□□□□ -0.02
SREBF1-202ENST00000355815 DNAJC9Q8WXX5 260 aa14.92□□□□□ -0.02
SREBF1-202ENST00000355815 ACSF2Q96CM8 615 aaPredicted RBP14.92□□□□□ -0.02
SREBF1-202ENST00000355815 TRIM55Q9BYV6 548 aa14.92□□□□□ -0.02
SREBF1-202ENST00000355815 DLG4P78352 724 aa14.92□□□□□ -0.02
SREBF1-202ENST00000355815 TMPRSS15P98073 1019 aa14.92□□□□□ -0.02
SREBF1-202ENST00000355815 RSBN1LQ6PCB5 846 aaPredicted RBP14.92□□□□□ -0.02
SREBF1-202ENST00000355815 MAP7D3Q8IWC1 876 aa14.92□□□□□ -0.02
SREBF1-202ENST00000355815 MXRA8Q9BRK3 442 aa14.92□□□□□ -0.02
SREBF1-202ENST00000355815 ZWILCHQ9H900 591 aa14.92□□□□□ -0.02
SREBF1-202ENST00000355815 DDX3XO00571 662 aaKnown RBP eCLIP14.92□□□□□ -0.027e-14■■□□□ 12.3
SREBF1-202ENST00000355815 ATXN3P54252 364 aaPredicted RBP14.92□□□□□ -0.02
SREBF1-202ENST00000355815 SH3BGRP55822 239 aaPredicted RBP14.92□□□□□ -0.02
SREBF1-202ENST00000355815 DRP2Q13474 957 aa14.92□□□□□ -0.02
SREBF1-202ENST00000355815 KRT39Q6A163 491 aa14.92□□□□□ -0.02
SREBF1-202ENST00000355815 ZNF720Q7Z2F6 126 aa14.92□□□□□ -0.02
SREBF1-202ENST00000355815 RHOT2Q8IXI1 618 aa14.92□□□□□ -0.02
SREBF1-202ENST00000355815 ATG4AQ8WYN0 398 aa14.92□□□□□ -0.02
SREBF1-202ENST00000355815 TUFT1Q9NNX1 390 aa14.92□□□□□ -0.02
SREBF1-202ENST00000355815 H7C0C1 242 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 TULP2O00295 520 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 TBX3O15119 743 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 DPEP1P16444 411 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 BAG6P46379 1132 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 ATP5OP48047 213 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 BYSLQ13895 437 aaKnown RBP14.91□□□□□ -0.02
SREBF1-202ENST00000355815 SLC29A2Q14542 456 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 FAM151AQ8WW52 585 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 CALN1Q9BXU9 219 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 ARL2BPQ9Y2Y0 163 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 ENTPD3O75355 529 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 MMEL1Q495T6 779 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 DCAF15Q66K64 600 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 OTOP1Q7RTM1 612 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 RTKN2Q8IZC4 609 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 KLF6Q99612 283 aaPredicted RBP14.91□□□□□ -0.02
SREBF1-202ENST00000355815 SCN11AQ9UI33 1791 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 OPLAHO14841 1288 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 GMNNO75496 209 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 HOXA10P31260 410 aaPredicted RBP14.91□□□□□ -0.02
SREBF1-202ENST00000355815 PSMC5P62195 406 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 SESTD1Q86VW0 696 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.91□□□□□ -0.02
SREBF1-202ENST00000355815 C18orf8Q96DM3 657 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 PCSK1NQ9UHG2 260 aa14.91□□□□□ -0.02
SREBF1-202ENST00000355815 CAND2O75155 1236 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 NR3C2P08235 984 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 SPATA31C1P0DKV0 1188 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 TARSP26639 723 aaKnown RBP14.9□□□□□ -0.02
SREBF1-202ENST00000355815 SERPINB3P29508 390 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 GABPAQ06546 454 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 CYTH1Q15438 398 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 CDO1Q16878 200 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 WDR18Q9BV38 432 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 PAPOLBQ9NRJ5 636 aaKnown RBP14.9□□□□□ -0.02
SREBF1-202ENST00000355815 METTL5Q9NRN9 209 aaKnown RBP14.9□□□□□ -0.02
SREBF1-202ENST00000355815 MARCOQ9UEW3 520 aaPredicted RBP14.9□□□□□ -0.02
SREBF1-202ENST00000355815 INPP5FQ9Y2H2 1132 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 TMEM120BA0PK00 339 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 UBOX5O94941 541 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 ESRRGP62508 458 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 RASSF3Q86WH2 238 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 SUGP1Q8IWZ8 645 aaKnown RBP14.9□□□□□ -0.02
SREBF1-202ENST00000355815 FBXL13Q8NEE6 735 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 PYROXD1Q8WU10 500 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 DNAJC18Q9H819 358 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 NPHS2Q9NP85 383 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 PCDHA10Q9Y5I2 948 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 NVLO15381 856 aaKnown RBP14.9□□□□□ -0.02
SREBF1-202ENST00000355815 CCND2P30279 289 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 RNASELQ05823 741 aaKnown RBP14.9□□□□□ -0.02
SREBF1-202ENST00000355815 DYNC1I2Q13409 638 aaKnown RBP14.9□□□□□ -0.02
SREBF1-202ENST00000355815 ISLR2Q6UXK2 745 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 MIEF2Q96C03 454 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 ARHGEF26Q96DR7 871 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 POLR3FQ9H1D9 316 aaPredicted RBP14.9□□□□□ -0.02
SREBF1-202ENST00000355815 NDE1Q9NXR1 346 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 SEL1LQ9UBV2 794 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 CSADQ9Y600 493 aa14.9□□□□□ -0.02
SREBF1-202ENST00000355815 UPP2O95045 317 aa14.89□□□□□ -0.03
SREBF1-202ENST00000355815 CCND1P24385 295 aa14.89□□□□□ -0.03
SREBF1-202ENST00000355815 ATICP31939 592 aa14.89□□□□□ -0.03
SREBF1-202ENST00000355815 DNAJC3Q13217 504 aa14.89□□□□□ -0.03
SREBF1-202ENST00000355815 CCDC14Q49A88 953 aa14.89□□□□□ -0.03
SREBF1-202ENST00000355815 TRMT10CQ7L0Y3 403 aaKnown RBP14.89□□□□□ -0.03
SREBF1-202ENST00000355815 MCUQ8NE86 351 aa14.89□□□□□ -0.03
SREBF1-202ENST00000355815 TBC1D22BQ9NU19 505 aa14.89□□□□□ -0.03
SREBF1-202ENST00000355815 SCINQ9Y6U3 715 aa14.89□□□□□ -0.03
SREBF1-202ENST00000355815 MYO3BQ8WXR4 1341 aa14.89□□□□□ -0.03
SREBF1-202ENST00000355815 SPDYE2BA6NHP3 402 aa14.89□□□□□ -0.03
SREBF1-202ENST00000355815 CRCPO75575 148 aa14.89□□□□□ -0.03
SREBF1-202ENST00000355815 SYF2O95926 243 aaKnown RBP14.89□□□□□ -0.03
SREBF1-202ENST00000355815 SPDYE6P0CI01 402 aa14.89□□□□□ -0.03
SREBF1-202ENST00000355815 ERVK-9P63128 1117 aa14.89□□□□□ -0.03
SREBF1-202ENST00000355815 ASPHQ12797 758 aa14.89□□□□□ -0.03
SREBF1-202ENST00000355815 SLC47A2Q86VL8 602 aa14.89□□□□□ -0.03
SREBF1-202ENST00000355815 C7orf31Q8N865 590 aa14.89□□□□□ -0.03
SREBF1-202ENST00000355815 TRIM56Q9BRZ2 755 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms