RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 PLS3P13797 630 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 CALB2P22676 271 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 ADCY8P40145 1251 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 NFIAQ12857 509 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 ABCB5Q2M3G0 1257 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 CAPRIN2Q6IMN6 1127 aaKnown RBP12.16□□□□□ -0.46
CAPN9-202ENST00000354537 MIS18BP1Q6P0N0 1132 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 PADI6Q6TGC4 694 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 ANKS1BQ7Z6G8 1248 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 ZNF677Q86XU0 584 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 KIF2BQ8N4N8 673 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 ENDOVQ8N8Q3 282 aaKnown RBP12.16□□□□□ -0.46
CAPN9-202ENST00000354537 DENND1AQ8TEH3 1009 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 DDX1Q92499 740 aaKnown RBP12.16□□□□□ -0.46
CAPN9-202ENST00000354537 PRCCQ92733 491 aaPredicted RBP12.16□□□□□ -0.46
CAPN9-202ENST00000354537 CFAP57Q96MR6 1250 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 ZNF577Q9BSK1 485 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 ZC3H12CQ9C0D7 883 aaKnown RBP12.16□□□□□ -0.46
CAPN9-202ENST00000354537 UNC45AQ9H3U1 944 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 RNPEPL1Q9HAU8 725 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 ETNK1Q9HBU6 452 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 LRRC4BQ9NT99 713 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 GGT7Q9UJ14 662 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 PRR12Q9ULL5 1215 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 STK38LQ9Y2H1 464 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 LY75O60449 1722 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 ZBTB39O15060 712 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 GRIN3BO60391 1043 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 LYPLA2O95372 231 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 LMNAP02545 664 aaKnown RBP12.16□□□□□ -0.46
CAPN9-202ENST00000354537 RXRBP28702 533 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 MAPK4P31152 587 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 CRKP46108 304 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 IKQ13123 557 aaPredicted RBP12.16□□□□□ -0.46
CAPN9-202ENST00000354537 KRT39Q6A163 491 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 SLC47A2Q86VL8 602 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 CYP4X1Q8N118 509 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 ANKLE1Q8NAG6 615 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 GDAP1Q8TB36 358 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 ZNF398Q8TD17 642 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 HELQQ8TDG4 1101 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 TMC2Q8TDI7 906 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 DHX38Q92620 1227 aaKnown RBP12.16□□□□□ -0.46
CAPN9-202ENST00000354537 LXNQ9BS40 222 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 DEFB129Q9H1M3 183 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 SSU72Q9NP77 194 aaKnown RBP12.16□□□□□ -0.46
CAPN9-202ENST00000354537 CHST7Q9NS84 486 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 WRAP73Q9P2S5 460 aaPredicted RBP12.16□□□□□ -0.46
CAPN9-202ENST00000354537 PPEF1O14829 653 aaPredicted RBP12.15□□□□□ -0.46
CAPN9-202ENST00000354537 CHMP2AO43633 222 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 ZC3H11AO75152 810 aaKnown RBP eCLIP12.15□□□□□ -0.46
CAPN9-202ENST00000354537 GH1P01241 217 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 FOXN2P32314 431 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 SF3A3Q12874 501 aaKnown RBP eCLIP12.15□□□□□ -0.46
CAPN9-202ENST00000354537 KLF1Q13351 362 aaPredicted RBP12.15□□□□□ -0.46
CAPN9-202ENST00000354537 MOGSQ13724 837 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 SPARCL1Q14515 664 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 ZFPM1Q8IX07 1006 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 SPICE1Q8N0Z3 855 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 ZCCHC9Q8N567 271 aaKnown RBP12.15□□□□□ -0.46
CAPN9-202ENST00000354537 NAF1Q96HR8 494 aaKnown RBP12.15□□□□□ -0.46
CAPN9-202ENST00000354537 TMEM8AQ9HCN3 771 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 EXOC7Q9UPT5 735 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 ATMINO43313 823 aaPredicted RBP12.15□□□□□ -0.46
CAPN9-202ENST00000354537 PSTPIP1O43586 416 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 SNAP25P60880 206 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 VPS72Q15906 364 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 FAM98CQ17RN3 349 aaKnown RBP12.15□□□□□ -0.46
CAPN9-202ENST00000354537 ZC3H12AQ5D1E8 599 aaKnown RBP12.15□□□□□ -0.46
CAPN9-202ENST00000354537 PPP1R2P3Q6NXS1 205 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 ZNF365Q70YC5 407 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 PTF1AQ7RTS3 328 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 USP37Q86T82 979 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 TRABD2AQ86V40 505 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 SRRM1Q8IYB3 904 aaKnown RBP12.15□□□□□ -0.46
CAPN9-202ENST00000354537 PLEKHO2Q8TD55 490 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 FBXO41Q8TF61 875 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 KAT5Q92993 513 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 UTP4Q969X6 686 aaKnown RBP12.15□□□□□ -0.46
CAPN9-202ENST00000354537 SPDL1Q96EA4 605 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 SAAL1Q96ER3 474 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 DDX27Q96GQ7 796 aaKnown RBP12.15□□□□□ -0.46
CAPN9-202ENST00000354537 BTBD6Q96KE9 485 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 NT5C1BQ96P26 610 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 LRRC37BQ96QE4 947 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 PCIF1Q9H4Z3 704 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 TLE6Q9H808 572 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 CYP39A1Q9NYL5 469 aa12.15□□□□□ -0.46
CAPN9-202ENST00000354537 MRPL11Q9Y3B7 192 aaKnown RBP12.15□□□□□ -0.46
CAPN9-202ENST00000354537 ATRNL1Q5VV63 1379 aa12.14□□□□□ -0.47
CAPN9-202ENST00000354537 A8MUI8 341 aa12.14□□□□□ -0.47
CAPN9-202ENST00000354537 RASA4BC9J798 803 aa12.14□□□□□ -0.47
CAPN9-202ENST00000354537 RASA4O43374 803 aa12.14□□□□□ -0.47
CAPN9-202ENST00000354537 P4HBP07237 508 aaKnown RBP12.14□□□□□ -0.47
CAPN9-202ENST00000354537 WDR4P57081 412 aaKnown RBP12.14□□□□□ -0.47
CAPN9-202ENST00000354537 TAF11Q15544 211 aa12.14□□□□□ -0.47
CAPN9-202ENST00000354537 PDK4Q16654 411 aa12.14□□□□□ -0.47
CAPN9-202ENST00000354537 CCDC142Q17RM4 750 aa12.14□□□□□ -0.47
CAPN9-202ENST00000354537 TMEM63BQ5T3F8 832 aa12.14□□□□□ -0.47
CAPN9-202ENST00000354537 NIPA1Q7RTP0 329 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms