RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 FSCN2O14926 492 aa23.68■■□□□ 1.38
UPF3A-201ENST00000351487 PIGRP01833 764 aa23.68■■□□□ 1.38
UPF3A-201ENST00000351487 MTERF2Q49AM1 385 aa23.68■■□□□ 1.38
UPF3A-201ENST00000351487 ODF2Q5BJF6 829 aa23.68■■□□□ 1.38
UPF3A-201ENST00000351487 DENND2CQ68D51 928 aa23.68■■□□□ 1.38
UPF3A-201ENST00000351487 CCDC105Q8IYK2 499 aa23.68■■□□□ 1.38
UPF3A-201ENST00000351487 MCOLN2Q8IZK6 566 aa23.68■■□□□ 1.38
UPF3A-201ENST00000351487 ANAPC7Q9UJX3 599 aa23.68■■□□□ 1.38
UPF3A-201ENST00000351487 GGA2Q9UJY4 613 aa23.68■■□□□ 1.38
UPF3A-201ENST00000351487 PASKQ96RG2 1323 aa23.68■■□□□ 1.38
UPF3A-201ENST00000351487 DCDC2CA8MYV0 355 aa23.67■■□□□ 1.38
UPF3A-201ENST00000351487 TRAPPC3O43617 180 aa23.67■■□□□ 1.38
UPF3A-201ENST00000351487 MAPK4P31152 587 aa23.67■■□□□ 1.38
UPF3A-201ENST00000351487 BAG6P46379 1132 aa23.67■■□□□ 1.38
UPF3A-201ENST00000351487 BPIFB4P59827 614 aa23.67■■□□□ 1.38
UPF3A-201ENST00000351487 PGM2Q96G03 612 aa23.67■■□□□ 1.38
UPF3A-201ENST00000351487 WDR90Q96KV7 1748 aa23.67■■□□□ 1.38
UPF3A-201ENST00000351487 MAFBQ9Y5Q3 323 aaPredicted RBP23.67■■□□□ 1.38
UPF3A-201ENST00000351487 E7EVH7 732 aa23.67■■□□□ 1.38
UPF3A-201ENST00000351487 C4BPAP04003 597 aaKnown RBP23.67■■□□□ 1.38
UPF3A-201ENST00000351487 ART4Q93070 314 aa23.67■■□□□ 1.38
UPF3A-201ENST00000351487 RNF25Q96BH1 459 aaPredicted RBP23.67■■□□□ 1.38
UPF3A-201ENST00000351487 CNOT10Q9H9A5 744 aaKnown RBP23.67■■□□□ 1.38
UPF3A-201ENST00000351487 MROH7Q68CQ1 1323 aa23.66■■□□□ 1.38
UPF3A-201ENST00000351487 ATG7O95352 703 aa23.66■■□□□ 1.38
UPF3A-201ENST00000351487 SHBGP04278 402 aa23.66■■□□□ 1.38
UPF3A-201ENST00000351487 CYP1A1P04798 512 aaPredicted RBP23.66■■□□□ 1.38
UPF3A-201ENST00000351487 ICAM3P32942 547 aa23.66■■□□□ 1.38
UPF3A-201ENST00000351487 POLGP54098 1239 aaPredicted RBP23.66■■□□□ 1.38
UPF3A-201ENST00000351487 CENPCQ03188 943 aa23.66■■□□□ 1.38
UPF3A-201ENST00000351487 STRN3Q13033 797 aa23.66■■□□□ 1.38
UPF3A-201ENST00000351487 BYSLQ13895 437 aaKnown RBP23.66■■□□□ 1.38
UPF3A-201ENST00000351487 WDR44Q5JSH3 913 aa23.66■■□□□ 1.38
UPF3A-201ENST00000351487 TDRD10Q5VZ19 366 aaKnown RBP23.66■■□□□ 1.38
UPF3A-201ENST00000351487 MICALCLQ6ZW33 695 aa23.66■■□□□ 1.38
UPF3A-201ENST00000351487 FNBP1Q96RU3 617 aa23.66■■□□□ 1.38
UPF3A-201ENST00000351487 PORCNQ9H237 461 aa23.66■■□□□ 1.38
UPF3A-201ENST00000351487 DHX33Q9H6R0 707 aaKnown RBP23.66■■□□□ 1.38
UPF3A-201ENST00000351487 RGS17Q9UGC6 210 aaPredicted RBP23.66■■□□□ 1.38
UPF3A-201ENST00000351487 LTBP3Q9NS15 1303 aa23.66■■□□□ 1.38
UPF3A-201ENST00000351487 HLA-DRAP01903 254 aa23.65■■□□□ 1.38
UPF3A-201ENST00000351487 SLC1A1P43005 524 aa23.65■■□□□ 1.38
UPF3A-201ENST00000351487 NAMPTP43490 491 aa23.65■■□□□ 1.38
UPF3A-201ENST00000351487 SLMAPQ14BN4 828 aa23.65■■□□□ 1.38
UPF3A-201ENST00000351487 CROCCP2Q86T23 111 aa23.65■■□□□ 1.38
UPF3A-201ENST00000351487 APOBEC3FQ8IUX4 373 aaKnown RBP23.65■■□□□ 1.38
UPF3A-201ENST00000351487 FAM84AQ96KN4 292 aa23.65■■□□□ 1.38
UPF3A-201ENST00000351487 AGO2Q9UKV8 859 aaKnown RBP23.65■■□□□ 1.38
UPF3A-201ENST00000351487 GMNCA6NCL1 334 aa23.65■■□□□ 1.38
UPF3A-201ENST00000351487 FZD9O00144 591 aa23.65■■□□□ 1.38
UPF3A-201ENST00000351487 CAND2O75155 1236 aa23.65■■□□□ 1.38
UPF3A-201ENST00000351487 ECEL1O95672 775 aa23.65■■□□□ 1.38
UPF3A-201ENST00000351487 ATP4AP20648 1035 aa23.65■■□□□ 1.38
UPF3A-201ENST00000351487 WNT7BP56706 349 aa23.65■■□□□ 1.38
UPF3A-201ENST00000351487 NLRP11P59045 1033 aaKnown RBP23.65■■□□□ 1.38
UPF3A-201ENST00000351487 SP2Q02086 613 aa23.65■■□□□ 1.38
UPF3A-201ENST00000351487 POTEAQ6S8J7 498 aa23.65■■□□□ 1.38
UPF3A-201ENST00000351487 YTHDF3Q7Z739 585 aaKnown RBP23.65■■□□□ 1.38
UPF3A-201ENST00000351487 TMEM109Q9BVC6 243 aa23.65■■□□□ 1.38
UPF3A-201ENST00000351487 PPANQ9NQ55 473 aaKnown RBP23.65■■□□□ 1.38
UPF3A-201ENST00000351487 SPDYE16A6NNV3 312 aaPredicted RBP23.64■■□□□ 1.38
UPF3A-201ENST00000351487 OATP04181 439 aa23.64■■□□□ 1.38
UPF3A-201ENST00000351487 TMOD1P28289 359 aa23.64■■□□□ 1.38
UPF3A-201ENST00000351487 PIK3CAP42336 1068 aa23.64■■□□□ 1.38
UPF3A-201ENST00000351487 CRELD2Q6UXH1 353 aaPredicted RBP23.64■■□□□ 1.38
UPF3A-201ENST00000351487 DEFB132Q7Z7B7 95 aa23.64■■□□□ 1.38
UPF3A-201ENST00000351487 GJA3Q9Y6H8 435 aa23.64■■□□□ 1.38
UPF3A-201ENST00000351487 CLDN3O15551 220 aa23.64■■□□□ 1.37
UPF3A-201ENST00000351487 MEFVO15553 781 aaPredicted RBP23.64■■□□□ 1.37
UPF3A-201ENST00000351487 CALCAP01258 141 aa23.64■■□□□ 1.37
UPF3A-201ENST00000351487 RARGP13631 454 aa23.64■■□□□ 1.37
UPF3A-201ENST00000351487 TNNI1P19237 187 aa23.64■■□□□ 1.37
UPF3A-201ENST00000351487 ACO1P21399 889 aaKnown RBP23.64■■□□□ 1.37
UPF3A-201ENST00000351487 RRM1P23921 792 aa23.64■■□□□ 1.37
UPF3A-201ENST00000351487 LMBRD2Q68DH5 695 aaPredicted RBP23.64■■□□□ 1.37
UPF3A-201ENST00000351487 SLFN12LQ6IEE8 588 aa23.64■■□□□ 1.37
UPF3A-201ENST00000351487 MON1BQ7L1V2 547 aa23.64■■□□□ 1.37
UPF3A-201ENST00000351487 ZNF526Q8TF50 670 aaPredicted RBP23.64■■□□□ 1.37
UPF3A-201ENST00000351487 ZNF302Q9NR11 478 aa23.64■■□□□ 1.37
UPF3A-201ENST00000351487 PTPRJQ12913 1337 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 VNN1O95497 513 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 GLRA2P23416 452 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 ARL2P36404 184 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 SLC29A2Q14542 456 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 DNERQ8NFT8 737 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 ASAP3Q8TDY4 903 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 MAIP1Q8WWC4 291 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 KLRG1Q96E93 195 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 CYFIP2Q96F07 1278 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 HAPLN2Q9GZV7 340 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 SEMA4AQ9H3S1 761 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 HOXC10Q9NYD6 342 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 NSFP46459 744 aaKnown RBP23.63■■□□□ 1.37
UPF3A-201ENST00000351487 KCNJ1P48048 391 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 CDR1P51861 262 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 PTP4A2Q12974 167 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 STXBP2Q15833 593 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 SGO2Q562F6 1265 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 TRIM72Q6ZMU5 477 aa23.63■■□□□ 1.37
UPF3A-201ENST00000351487 TMEM143Q96AN5 459 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms