RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 SFI1A8K8P3 1242 aa13.04□□□□□ -0.32
TUBD1-203ENST00000346141 H0YCG3 227 aa13.04□□□□□ -0.32
TUBD1-203ENST00000346141 PROZP22891 400 aa13.04□□□□□ -0.32
TUBD1-203ENST00000346141 LONP1P36776 959 aaKnown RBP13.04□□□□□ -0.32
TUBD1-203ENST00000346141 RAD51AP2Q09MP3 1159 aa13.04□□□□□ -0.32
TUBD1-203ENST00000346141 XKR4Q5GH76 650 aa13.04□□□□□ -0.32
TUBD1-203ENST00000346141 GLRA4Q5JXX5 417 aa13.04□□□□□ -0.32
TUBD1-203ENST00000346141 LILRA6Q6PI73 481 aa13.04□□□□□ -0.32
TUBD1-203ENST00000346141 DCLRE1AQ6PJP8 1040 aa13.04□□□□□ -0.32
TUBD1-203ENST00000346141 MPZL3Q6UWV2 235 aa13.04□□□□□ -0.32
TUBD1-203ENST00000346141 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.04□□□□□ -0.32
TUBD1-203ENST00000346141 CEP57Q86XR8 500 aa13.04□□□□□ -0.32
TUBD1-203ENST00000346141 PALB2Q86YC2 1186 aa13.04□□□□□ -0.32
TUBD1-203ENST00000346141 FBXL6Q8N531 539 aa13.04□□□□□ -0.32
TUBD1-203ENST00000346141 TMEM161BQ8NDZ6 487 aa13.04□□□□□ -0.32
TUBD1-203ENST00000346141 SLC38A7Q9NVC3 462 aa13.04□□□□□ -0.32
TUBD1-203ENST00000346141 LARSQ9P2J5 1176 aaKnown RBP13.04□□□□□ -0.32
TUBD1-203ENST00000346141 SMIM28A0A1B0GU29 152 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 VPS37CA5D8V6 355 aaPredicted RBP13.03□□□□□ -0.32
TUBD1-203ENST00000346141 ABLIM1O14639 778 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 TRAPPC3O43617 180 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 TOM1L1O75674 476 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 B3GAT3O94766 335 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 SPATA31D3P0C874 917 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 MAPTP10636 758 aaKnown RBP13.03□□□□□ -0.32
TUBD1-203ENST00000346141 RPL17P18621 184 aaKnown RBP13.03□□□□□ -0.32
TUBD1-203ENST00000346141 SCP2P22307 547 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 PSMD5Q16401 504 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 UPP1Q16831 310 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 PRSS55Q6UWB4 352 aaPredicted RBP13.03□□□□□ -0.32
TUBD1-203ENST00000346141 ALKAL1Q6UXT8 129 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 ZPBP2Q6X784 338 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 SPATA31D4Q6ZUB0 917 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 GLYCTKQ8IVS8 523 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 CEP120Q8N960 986 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 LNX1Q8TBB1 728 aaPredicted RBP13.03□□□□□ -0.32
TUBD1-203ENST00000346141 FEZF2Q8TBJ5 459 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 TMC2Q8TDI7 906 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 SMG7Q92540 1137 aaKnown RBP13.03□□□□□ -0.32
TUBD1-203ENST00000346141 DDX27Q96GQ7 796 aaKnown RBP13.03□□□□□ -0.32
TUBD1-203ENST00000346141 SNX27Q96L92 541 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 ACAP3Q96P50 834 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 WDR6Q9NNW5 1121 aaKnown RBP13.03□□□□□ -0.32
TUBD1-203ENST00000346141 LIMD1Q9UGP4 676 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 ODF2LQ9ULJ1 636 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 DENND4AQ7Z401 1863 aa13.03□□□□□ -0.32
TUBD1-203ENST00000346141 CACNA1HO95180 2353 aa13.02□□□□□ -0.32
TUBD1-203ENST00000346141 WDFY4Q6ZS81 3184 aa13.02□□□□□ -0.33
TUBD1-203ENST00000346141 RFPL2O75678 378 aa13.02□□□□□ -0.33
TUBD1-203ENST00000346141 ASGR2P07307 311 aa13.02□□□□□ -0.33
TUBD1-203ENST00000346141 HOXB3P14651 431 aaPredicted RBP13.02□□□□□ -0.33
TUBD1-203ENST00000346141 KCNE1P15382 129 aa13.02□□□□□ -0.33
TUBD1-203ENST00000346141 FGFR3P22607 806 aa13.02□□□□□ -0.33
TUBD1-203ENST00000346141 CLCNKBP51801 687 aa13.02□□□□□ -0.33
TUBD1-203ENST00000346141 OSTNP61366 133 aa13.02□□□□□ -0.33
TUBD1-203ENST00000346141 NOLC1Q14978 699 aaKnown RBP eCLIP13.02□□□□□ -0.33
TUBD1-203ENST00000346141 SF3A1Q15459 793 aaKnown RBP13.02□□□□□ -0.33
TUBD1-203ENST00000346141 RASSF8Q8NHQ8 419 aa13.02□□□□□ -0.33
TUBD1-203ENST00000346141 KCNN1Q92952 543 aa13.02□□□□□ -0.33
TUBD1-203ENST00000346141 ZNF707Q96C28 371 aaPredicted RBP13.02□□□□□ -0.33
TUBD1-203ENST00000346141 IPO9Q96P70 1041 aaKnown RBP13.02□□□□□ -0.33
TUBD1-203ENST00000346141 PRRX2Q99811 253 aa13.02□□□□□ -0.33
TUBD1-203ENST00000346141 CLSTN3Q9BQT9 956 aa13.02□□□□□ -0.33
TUBD1-203ENST00000346141 PRKD2Q9BZL6 878 aa13.02□□□□□ -0.33
TUBD1-203ENST00000346141 PIDD1Q9HB75 910 aa13.02□□□□□ -0.33
TUBD1-203ENST00000346141 ANKFY1Q9P2R3 1169 aa13.02□□□□□ -0.33
TUBD1-203ENST00000346141 FBXW11Q9UKB1 542 aa13.02□□□□□ -0.33
TUBD1-203ENST00000346141 CLUHO75153 1309 aa13.02□□□□□ -0.33
TUBD1-203ENST00000346141 PLXNA3P51805 1871 aa13.01□□□□□ -0.33
TUBD1-203ENST00000346141 ZMYND10O75800 440 aa13.01□□□□□ -0.33
TUBD1-203ENST00000346141 NCKAP1LP55160 1127 aa13.01□□□□□ -0.33
TUBD1-203ENST00000346141 ARSHQ5FYA8 562 aa13.01□□□□□ -0.33
TUBD1-203ENST00000346141 LIN9Q5TKA1 542 aa13.01□□□□□ -0.33
TUBD1-203ENST00000346141 GPBP1Q86WP2 473 aa13.01□□□□□ -0.33
TUBD1-203ENST00000346141 INTS4Q96HW7 963 aaKnown RBP13.01□□□□□ -0.33
TUBD1-203ENST00000346141 CNTN3Q9P232 1028 aa13.01□□□□□ -0.33
TUBD1-203ENST00000346141 MYO10Q9HD67 2058 aa13.01□□□□□ -0.33
TUBD1-203ENST00000346141 C2orf16Q68DN1 1984 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 NPHP3-ACAD11A0A0J9YXS1 232 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 PODXLO00592 558 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 CLDN3O15551 220 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 HNRNPA1P09651 372 aaKnown RBP eCLIP13□□□□□ -0.33
TUBD1-203ENST00000346141 MYBP10242 640 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 HARSP12081 509 aaKnown RBP13□□□□□ -0.33
TUBD1-203ENST00000346141 PLCG1P19174 1290 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 ZNF131P52739 623 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 SOX4Q06945 474 aaPredicted RBP13□□□□□ -0.33
TUBD1-203ENST00000346141 MCL1Q07820 350 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 ANKS3Q6ZW76 656 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 HAUS6Q7Z4H7 955 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 RAD54LQ92698 747 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 REEP2Q9BRK0 252 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 PARVGQ9HBI0 331 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 GOLGA2P5Q9HBQ8 144 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 BLOC1S4Q9NUP1 217 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13□□□□□ -0.33
TUBD1-203ENST00000346141 IGSF9Q9P2J2 1179 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 EPS15L1Q9UBC2 864 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 MTRRQ9UBK8 725 aa13□□□□□ -0.33
TUBD1-203ENST00000346141 GTF3C5Q9Y5Q8 519 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms