RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 HYOU1Q9Y4L1 999 aa13.8□□□□□ -0.2
CLK3-201ENST00000345005 A0A087X0T9 212 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 RRN3P2A6NIE6 340 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 TULP1O00294 542 aaPredicted RBP13.79□□□□□ -0.2
CLK3-201ENST00000345005 ACKR2O00590 384 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 ENC1O14682 589 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 EVI5O60447 810 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 HSF2BPO75031 334 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 FAM228BP0C875 321 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 ZNF865P0CJ78 1059 aaPredicted RBP13.79□□□□□ -0.2
CLK3-201ENST00000345005 PHKA2P46019 1235 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 ACOT2P49753 483 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 ARHGAP44Q17R89 818 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 MTHFD1LQ6UB35 978 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 SV2AQ7L0J3 742 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 TADA2BQ86TJ2 420 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 LINC01465Q8N7H1 131 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 C1orf131Q8NDD1 294 aaKnown RBP13.79□□□□□ -0.2
CLK3-201ENST00000345005 CAVIN3Q969G5 261 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 NLRP4Q96MN2 994 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 SH3GL2Q99962 352 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 TCHPQ9BT92 498 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 CAPS2Q9BXY5 557 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 RAB20Q9NX57 234 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 ADAMTS1Q9UHI8 967 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 Q9Y3F1 56 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 ANK1P16157 1881 aa13.79□□□□□ -0.2
CLK3-201ENST00000345005 SRRM3A6NNA2 597 aaPredicted RBP13.78□□□□□ -0.2
CLK3-201ENST00000345005 ADCY6O43306 1168 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 ZC3H11AO75152 810 aaKnown RBP eCLIP13.78□□□□□ -0.2
CLK3-201ENST00000345005 ALDH1A1P00352 501 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 EDN1P05305 212 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 TNNI1P19237 187 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 PSEN1P49768 467 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 MFAP3P55082 362 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 SKOR1P84550 965 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 CCDC181Q5TID7 509 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 TSHZ1Q6ZSZ6 1077 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 MICALCLQ6ZW33 695 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 FAM81BQ96LP2 452 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 NT5C1BQ96P26 610 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 TACO1Q9BSH4 297 aaKnown RBP13.78□□□□□ -0.2
CLK3-201ENST00000345005 RBAKQ9NYW8 714 aaPredicted RBP13.78□□□□□ -0.2
CLK3-201ENST00000345005 HDAC6Q9UBN7 1215 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 TFR2Q9UP52 801 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 INO80B-WBP1J3KQ70 363 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 FOXN3O00409 490 aaPredicted RBP13.78□□□□□ -0.2
CLK3-201ENST00000345005 OGTO15294 1046 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 GJB1P08034 283 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 IRAK1P51617 712 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 MCL1Q07820 350 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 PRPF4BQ13523 1007 aaKnown RBP13.78□□□□□ -0.2
CLK3-201ENST00000345005 NAB2Q15742 525 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 GRIK4Q16099 956 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 CCL14Q16627 93 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 FAM187BQ17R55 369 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 C15orf39Q6ZRI6 1047 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 IFNLR1Q8IU57 520 aaPredicted RBP13.78□□□□□ -0.2
CLK3-201ENST00000345005 ARHGEF19Q8IW93 802 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 IFT20Q8IY31 132 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 SEMA4DQ92854 862 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 INO80BQ9C086 356 aaPredicted RBP13.78□□□□□ -0.2
CLK3-201ENST00000345005 GPR88Q9GZN0 384 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 TOPORSQ9NS56 1045 aaPredicted RBP13.78□□□□□ -0.2
CLK3-201ENST00000345005 AKT3Q9Y243 479 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 DUSP10Q9Y6W6 482 aa13.78□□□□□ -0.2
CLK3-201ENST00000345005 IGHA2P01877 340 aa13.77□□□□□ -0.21
CLK3-201ENST00000345005 AP3M2P53677 418 aa13.77□□□□□ -0.21
CLK3-201ENST00000345005 MBTD1Q05BQ5 628 aa13.77□□□□□ -0.21
CLK3-201ENST00000345005 GRM1Q13255 1194 aa13.77□□□□□ -0.21
CLK3-201ENST00000345005 KIF22Q14807 665 aa13.77□□□□□ -0.21
CLK3-201ENST00000345005 SURF1Q15526 300 aa13.77□□□□□ -0.21
CLK3-201ENST00000345005 ATF7IP2Q5U623 682 aa13.77□□□□□ -0.21
CLK3-201ENST00000345005 EMC10Q5UCC4 262 aa13.77□□□□□ -0.21
CLK3-201ENST00000345005 MPZL3Q6UWV2 235 aa13.77□□□□□ -0.21
CLK3-201ENST00000345005 TLK2Q86UE8 772 aa13.77□□□□□ -0.21
CLK3-201ENST00000345005 CREG2Q8IUH2 290 aa13.77□□□□□ -0.21
CLK3-201ENST00000345005 TAS1R2Q8TE23 839 aa13.77□□□□□ -0.21
CLK3-201ENST00000345005 ZNF516Q92618 1163 aa13.77□□□□□ -0.21
CLK3-201ENST00000345005 CAPZA3Q96KX2 299 aa13.77□□□□□ -0.21
CLK3-201ENST00000345005 CGRRF1Q99675 332 aa13.77□□□□□ -0.21
CLK3-201ENST00000345005 AP5M1Q9H0R1 490 aa13.77□□□□□ -0.21
CLK3-201ENST00000345005 IFT122Q9HBG6 1241 aa13.77□□□□□ -0.21
CLK3-201ENST00000345005 PRMT7Q9NVM4 692 aaPredicted RBP13.77□□□□□ -0.21
CLK3-201ENST00000345005 TRIP12Q14669 1992 aaPredicted RBP13.77□□□□□ -0.21
CLK3-201ENST00000345005 ATP8B3O60423 1300 aa13.77□□□□□ -0.21
CLK3-201ENST00000345005 MACROD2A1Z1Q3 448 aa13.76□□□□□ -0.21
CLK3-201ENST00000345005 TTLL13PA6NNM8 815 aa13.76□□□□□ -0.21
CLK3-201ENST00000345005 AGPSO00116 658 aa13.76□□□□□ -0.21
CLK3-201ENST00000345005 EIF3HO15372 352 aaKnown RBP eCLIP13.76□□□□□ -0.21
CLK3-201ENST00000345005 KIF1CO43896 1103 aaKnown RBP13.76□□□□□ -0.21
CLK3-201ENST00000345005 ZEB2O60315 1214 aa13.76□□□□□ -0.21
CLK3-201ENST00000345005 C4BPAP04003 597 aaKnown RBP13.76□□□□□ -0.21
CLK3-201ENST00000345005 PROZP22891 400 aa13.76□□□□□ -0.21
CLK3-201ENST00000345005 CPT1AP50416 773 aa13.76□□□□□ -0.21
CLK3-201ENST00000345005 FCGRTP55899 365 aa13.76□□□□□ -0.21
CLK3-201ENST00000345005 CDC42EP1Q00587 391 aa13.76□□□□□ -0.21
CLK3-201ENST00000345005 TMEM132AQ24JP5 1023 aa13.76□□□□□ -0.21
CLK3-201ENST00000345005 ZACNQ401N2 412 aa13.76□□□□□ -0.21
CLK3-201ENST00000345005 ALKBH5Q6P6C2 394 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms