RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 GTF2BQ00403 316 aa17.54■□□□□ 0.4
ATG4B-201ENST00000344376 FOXD4L6Q3SYB3 417 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-201ENST00000344376 FOXD4L3Q6VB84 417 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-201ENST00000344376 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-201ENST00000344376 MAP4K3Q8IVH8 894 aa17.54■□□□□ 0.4
ATG4B-201ENST00000344376 PDILTQ8N807 584 aa17.54■□□□□ 0.4
ATG4B-201ENST00000344376 ST6GALNAC4Q9H4F1 302 aa17.54■□□□□ 0.4
ATG4B-201ENST00000344376 CFAP45Q9UL16 551 aa17.54■□□□□ 0.4
ATG4B-201ENST00000344376 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-201ENST00000344376 MYMKA6NI61 221 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 UPP1Q16831 310 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 RTP2Q5QGT7 225 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 TMC5Q6UXY8 1006 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 SFR1Q86XK3 245 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 RNF135Q8IUD6 432 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 PIK3R5Q8WYR1 880 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 HVCN1Q96D96 273 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 ZMAT2Q96NC0 199 aaKnown RBP17.53■□□□□ 0.4
ATG4B-201ENST00000344376 LRRC27Q9C0I9 530 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 PLEKHA5Q9HAU0 1116 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 GOLGA2P5Q9HBQ8 144 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 PODXLO00592 558 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 OGTO15294 1046 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 CXCL8P10145 99 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 IDEP14735 1019 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 RPL9P32969 192 aaKnown RBP17.53■□□□□ 0.4
ATG4B-201ENST00000344376 PPP2R3AQ06190 1150 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 PSMD5Q16401 504 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 SLC10A6Q3KNW5 377 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 SEZ6Q53EL9 994 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 TMEM31Q5JXX7 168 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 PRSS55Q6UWB4 352 aaPredicted RBP17.53■□□□□ 0.4
ATG4B-201ENST00000344376 HDAC7Q8WUI4 952 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 FIZ1Q96SL8 496 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 MSTO1Q9BUK6 570 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 CUEDC2Q9H467 287 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 PLEKHA4Q9H4M7 779 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 POMKQ9H5K3 350 aa17.53■□□□□ 0.4
ATG4B-201ENST00000344376 MRPL44Q9H9J2 332 aaKnown RBP17.53■□□□□ 0.4
ATG4B-201ENST00000344376 A0A087X0B3 334 aa17.52■□□□□ 0.39
ATG4B-201ENST00000344376 SOX4Q06945 474 aaPredicted RBP17.52■□□□□ 0.39
ATG4B-201ENST00000344376 SLFN12LQ6IEE8 588 aa17.52■□□□□ 0.39
ATG4B-201ENST00000344376 C15orf39Q6ZRI6 1047 aa17.52■□□□□ 0.39
ATG4B-201ENST00000344376 ZNF720Q7Z2F6 126 aa17.52■□□□□ 0.39
ATG4B-201ENST00000344376 GPR149Q86SP6 731 aa17.52■□□□□ 0.39
ATG4B-201ENST00000344376 PALB2Q86YC2 1186 aa17.52■□□□□ 0.39
ATG4B-201ENST00000344376 GLYCTKQ8IVS8 523 aa17.52■□□□□ 0.39
ATG4B-201ENST00000344376 CMASQ8NFW8 434 aaPredicted RBP17.52■□□□□ 0.39
ATG4B-201ENST00000344376 DNAJC19Q96DA6 116 aa17.52■□□□□ 0.39
ATG4B-201ENST00000344376 RPF1Q9H9Y2 349 aaKnown RBP17.52■□□□□ 0.39
ATG4B-201ENST00000344376 MUTYHQ9UIF7 546 aa17.52■□□□□ 0.39
ATG4B-201ENST00000344376 CDH22Q9UJ99 828 aa17.52■□□□□ 0.39
ATG4B-201ENST00000344376 EXOC7Q9UPT5 735 aa17.52■□□□□ 0.39
ATG4B-201ENST00000344376 NUB1Q9Y5A7 615 aa17.52■□□□□ 0.39
ATG4B-201ENST00000344376 MYH15Q9Y2K3 1946 aa17.51■□□□□ 0.39
ATG4B-201ENST00000344376 TGM5O43548 720 aa17.51■□□□□ 0.39
ATG4B-201ENST00000344376 XPOTO43592 962 aaKnown RBP17.51■□□□□ 0.39
ATG4B-201ENST00000344376 WEE2P0C1S8 567 aa17.51■□□□□ 0.39
ATG4B-201ENST00000344376 RPL17P18621 184 aaKnown RBP17.51■□□□□ 0.39
ATG4B-201ENST00000344376 ME1P48163 572 aa17.51■□□□□ 0.39
ATG4B-201ENST00000344376 PKP1Q13835 747 aa17.51■□□□□ 0.39
ATG4B-201ENST00000344376 ZC2HC1CQ53FD0 456 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-201ENST00000344376 HERC4Q5GLZ8 1057 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-201ENST00000344376 CYP26C1Q6V0L0 522 aa17.51■□□□□ 0.39
ATG4B-201ENST00000344376 IQUBQ8NA54 791 aa17.51■□□□□ 0.39
ATG4B-201ENST00000344376 LNX1Q8TBB1 728 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-201ENST00000344376 C18orf25Q96B23 403 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-201ENST00000344376 TSPAN18Q96SJ8 248 aa17.51■□□□□ 0.39
ATG4B-201ENST00000344376 HAPLN2Q9GZV7 340 aa17.51■□□□□ 0.39
ATG4B-201ENST00000344376 TNMDQ9H2S6 317 aa17.51■□□□□ 0.39
ATG4B-201ENST00000344376 A0A0B4J269 797 aa17.5■□□□□ 0.39
ATG4B-201ENST00000344376 GPR37L1O60883 481 aa17.5■□□□□ 0.39
ATG4B-201ENST00000344376 FGFR3P22607 806 aa17.5■□□□□ 0.39
ATG4B-201ENST00000344376 SP100P23497 879 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-201ENST00000344376 AMPD3Q01432 767 aa17.5■□□□□ 0.39
ATG4B-201ENST00000344376 ALCAMQ13740 583 aa17.5■□□□□ 0.39
ATG4B-201ENST00000344376 KANK3Q6NY19 840 aa17.5■□□□□ 0.39
ATG4B-201ENST00000344376 CD302Q8IX05 232 aa17.5■□□□□ 0.39
ATG4B-201ENST00000344376 CCDC65Q8IXS2 484 aa17.5■□□□□ 0.39
ATG4B-201ENST00000344376 KIF12Q96FN5 646 aa17.5■□□□□ 0.39
ATG4B-201ENST00000344376 OLFML3Q9NRN5 406 aa17.5■□□□□ 0.39
ATG4B-201ENST00000344376 FAM13BQ9NYF5 915 aa17.5■□□□□ 0.39
ATG4B-201ENST00000344376 UBQLN1Q9UMX0 589 aaKnown RBP17.5■□□□□ 0.39
ATG4B-201ENST00000344376 PCDHB13Q9Y5F0 798 aa17.5■□□□□ 0.39
ATG4B-201ENST00000344376 TTC26A0AVF1 554 aa17.49■□□□□ 0.39
ATG4B-201ENST00000344376 GCNT3O95395 438 aa17.49■□□□□ 0.39
ATG4B-201ENST00000344376 SPATA31D3P0C874 917 aa17.49■□□□□ 0.39
ATG4B-201ENST00000344376 TNFSF9P41273 254 aa17.49■□□□□ 0.39
ATG4B-201ENST00000344376 LIN9Q5TKA1 542 aa17.49■□□□□ 0.39
ATG4B-201ENST00000344376 ADALQ6DHV7 355 aa17.49■□□□□ 0.39
ATG4B-201ENST00000344376 SHC4Q6S5L8 630 aa17.49■□□□□ 0.39
ATG4B-201ENST00000344376 SPATA31D4Q6ZUB0 917 aa17.49■□□□□ 0.39
ATG4B-201ENST00000344376 CCDC149Q6ZUS6 474 aa17.49■□□□□ 0.39
ATG4B-201ENST00000344376 ANKS3Q6ZW76 656 aa17.49■□□□□ 0.39
ATG4B-201ENST00000344376 TDRD5Q8NAT2 981 aaKnown RBP17.49■□□□□ 0.39
ATG4B-201ENST00000344376 KREMEN2Q8NCW0 462 aa17.49■□□□□ 0.39
ATG4B-201ENST00000344376 C3orf58Q8NDZ4 430 aa17.49■□□□□ 0.39
ATG4B-201ENST00000344376 DHX58Q96C10 678 aa17.49■□□□□ 0.39
ATG4B-201ENST00000344376 ACCSQ96QU6 501 aa17.49■□□□□ 0.39
ATG4B-201ENST00000344376 CLSTN3Q9BQT9 956 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms