RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 AGGF1Q8N302 714 aaeCLIP11.53□□□□□ -0.56
RPL28-201ENST00000344063 TRIML2Q8N7C3 387 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 NSUN6Q8TEA1 469 aaKnown RBP11.53□□□□□ -0.56
RPL28-201ENST00000344063 TSPYL2Q9H2G4 693 aaPredicted RBP11.53□□□□□ -0.56
RPL28-201ENST00000344063 SEMA4AQ9H3S1 761 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 AGPAT3Q9NRZ7 376 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 BLOC1S4Q9NUP1 217 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 MARCOQ9UEW3 520 aaPredicted RBP11.53□□□□□ -0.56
RPL28-201ENST00000344063 TTLL3Q9Y4R7 772 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 SPATA31A5Q5VU36 1347 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 SPATA31A7Q8IWB4 1347 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 PABPN1LA6NDY0 278 aaKnown RBP11.53□□□□□ -0.56
RPL28-201ENST00000344063 CES2O00748 559 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 KIAA0391O15091 583 aaKnown RBP11.53□□□□□ -0.56
RPL28-201ENST00000344063 TRAPPC3O43617 180 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 YWHABP31946 246 aaKnown RBP11.53□□□□□ -0.56
RPL28-201ENST00000344063 MAPK7Q13164 816 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 GIT2Q14161 759 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 RABGAP1LQ5R372 815 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 HSD3B7Q9H2F3 369 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 GABBR1Q9UBS5 961 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 PCDHA10Q9Y5I2 948 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 FMN2Q9NZ56 1722 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 ZBED1O96006 694 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 KRT7P08729 469 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 PDIA2Q13087 525 aaKnown RBP11.53□□□□□ -0.56
RPL28-201ENST00000344063 GPS1Q13098 491 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 RCN1Q15293 331 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 TMEM119Q4V9L6 283 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 ZNF667Q5HYK9 610 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 THEMIS2Q5TEJ8 643 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 NME8Q8N427 588 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 SMYD2Q9NRG4 433 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 F8VZ95 297 aa11.52□□□□□ -0.56
RPL28-201ENST00000344063 MSH4O15457 936 aa11.52□□□□□ -0.56
RPL28-201ENST00000344063 CYTH3O43739 400 aa11.52□□□□□ -0.56
RPL28-201ENST00000344063 PAPOLAP51003 745 aaKnown RBP11.52□□□□□ -0.56
RPL28-201ENST00000344063 OR6B2Q6IFH4 312 aa11.52□□□□□ -0.56
RPL28-201ENST00000344063 ZNF571Q7Z3V5 609 aaPredicted RBP11.52□□□□□ -0.56
RPL28-201ENST00000344063 ATP11CQ8NB49 1132 aa11.52□□□□□ -0.56
RPL28-201ENST00000344063 SLC30A5Q8TAD4 765 aa11.52□□□□□ -0.56
RPL28-201ENST00000344063 ZWILCHQ9H900 591 aa11.52□□□□□ -0.56
RPL28-201ENST00000344063 OSGEPQ9NPF4 335 aa11.52□□□□□ -0.56
RPL28-201ENST00000344063 DDX56Q9NY93 547 aaKnown RBP11.52□□□□□ -0.56
RPL28-201ENST00000344063 SIK3Q9Y2K2 1263 aa11.52□□□□□ -0.56
RPL28-201ENST00000344063 KIF1AQ12756 1690 aa11.52□□□□□ -0.56
RPL28-201ENST00000344063 MUTP22033 750 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 KCNJ2P63252 427 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 BTKQ06187 659 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 QPCTQ16769 361 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 KRT80Q6KB66 452 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 SCARA5Q6ZMJ2 495 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 CYFIP1Q7L576 1253 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 RNF146Q9NTX7 359 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 CAPN9O14815 690 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 UPP2O95045 317 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 FNTAP49354 379 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 FUT2Q10981 343 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 LAMB3Q13751 1172 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 VPS72Q15906 364 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 DPY19L2Q6NUT2 758 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 COL23A1Q86Y22 540 aaPredicted RBP11.52□□□□□ -0.57
RPL28-201ENST00000344063 CXorf38Q8TB03 319 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 NLRP7Q8WX94 980 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 TMEM237Q96Q45 408 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 SLC13A1Q9BZW2 595 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 PARVAQ9NVD7 372 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 GTF3C4Q9UKN8 822 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 SREBF1P36956 1147 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 TAP1Q03518 808 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 SNRNP35Q16560 246 aaKnown RBP11.52□□□□□ -0.57
RPL28-201ENST00000344063 ZNF394Q53GI3 561 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.52□□□□□ -0.57
RPL28-201ENST00000344063 RPF1Q9H9Y2 349 aaKnown RBP11.52□□□□□ -0.57
RPL28-201ENST00000344063 FIS1Q9Y3D6 152 aa11.52□□□□□ -0.57
RPL28-201ENST00000344063 COPEO14579 308 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 MARK3P27448 753 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 SERPINB3P29508 390 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 AP2B1P63010 937 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 RPS6KC1Q96S38 1066 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 RUSC1Q9BVN2 902 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 AGO2Q9UKV8 859 aaKnown RBP11.51□□□□□ -0.57
RPL28-201ENST00000344063 SMG5Q9UPR3 1016 aaKnown RBP11.51□□□□□ -0.57
RPL28-201ENST00000344063 TRAF3IP3Q9Y228 551 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 PI4K2BG5E9Z4 385 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 AGPSO00116 658 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 EPHB6O15197 1021 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 AKAP3O75969 853 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 ITGB3BPQ13352 177 aaPredicted RBP11.51□□□□□ -0.57
RPL28-201ENST00000344063 DCLK2Q8N568 766 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 PRPF31Q8WWY3 499 aaKnown RBP11.51□□□□□ -0.57
RPL28-201ENST00000344063 LRGUKQ96M69 825 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 ZSWIM1Q9BR11 485 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 THAP2Q9H0W7 228 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 XAB2Q9HCS7 855 aaKnown RBP11.51□□□□□ -0.57
RPL28-201ENST00000344063 FAM53CQ9NYF3 392 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 FAM47DPA6NHR8 397 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 RSPH10B2B2RC85 870 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 RSPH10BP0C881 870 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 ARL4AP40617 200 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms