RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 FAM47CQ5HY64 1035 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 JADE1Q6IE81 842 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 LRRC74BQ6ZQY2 392 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 RFX8Q6ZV50 586 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 TMEM179Q6ZVK1 233 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 C16orf86Q6ZW13 317 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 SUPT20HQ8NEM7 779 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 DDI1Q8WTU0 396 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 MYH13Q9UKX3 1938 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 UBR1Q8IWV7 1749 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 MYH1P12882 1939 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 MYH4Q9Y623 1939 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 SFNP31947 248 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 MAPRE2Q15555 327 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 MIGA2Q7L4E1 593 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 MCPH1Q8NEM0 835 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 FRMD8Q9BZ67 464 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 CYP39A1Q9NYL5 469 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 FER1L4A9Z1Z3 1794 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 TFDP3Q5H9I0 405 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 KLC3Q6P597 504 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 RAB44Q7Z6P3 723 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 PIGBQ92521 554 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 TATDN2Q93075 761 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 MTBPQ96DY7 904 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 TRAPPC9Q96Q05 1148 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 PACSIN1Q9BY11 444 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 KLHL4Q9C0H6 718 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 THAP2Q9H0W7 228 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 CCDC134Q9H6E4 229 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 TBC1D23Q9NUY8 699 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 ATRNO75882 1429 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 CCDC88AQ3V6T2 1871 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 TCRBV5S4A2TA0A5A2 114 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 GOLGA8CPA6NN73 597 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 MYCNP04198 464 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 AP3M2P53677 418 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 DRG2P55039 364 aaKnown RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 IGBP1P78318 339 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 TFDP2Q14188 446 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 SLC13A5Q86YT5 568 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 TSEN2Q8NCE0 465 aaKnown RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 JADE3Q92613 823 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 MTMR8Q96EF0 704 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 KIFC3Q9BVG8 833 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 AFF2P51816 1311 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 AP3B1O00203 1094 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 NLRP11P59045 1033 aaKnown RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 HIPK4Q8NE63 616 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 FBXO25Q8TCJ0 367 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 DHX38Q92620 1227 aaKnown RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 SIKE1Q9BRV8 207 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 MYH10P35580 1976 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 ADGRA3Q8IWK6 1321 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 MAN1A2O60476 641 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 LCA5LO95447 670 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 CCND2P30279 289 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 MTMR1Q13613 665 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 SEC23AQ15436 765 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 BBS9Q3SYG4 887 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 ZNF572Q7Z3I7 529 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 LCA5Q86VQ0 697 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 FAM84BQ96KN1 310 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 TRPC5Q9UL62 973 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 GRID1Q9ULK0 1009 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 ARHGAP26Q9UNA1 814 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 NFAT5O94916 1531 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 BBOX1O75936 387 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 MTFR1Q15390 333 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 TMEM270Q6UE05 265 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 C4orf22Q6V702 233 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 LXNQ9BS40 222 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 SNX25Q9H3E2 840 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 SEMA6BQ9H3T3 888 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 ATP4AP20648 1035 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 SAT1P21673 171 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 COMTP21964 271 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 IFRD2Q12894 506 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 RNF43Q68DV7 783 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 GPD1LQ8N335 351 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 ZSWIM1Q9BR11 485 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 XAB2Q9HCS7 855 aaKnown RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 UBTFL6P0CB48 400 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 CYP19A1P11511 503 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 GZMAP12544 262 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 SERPINB10P48595 397 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 SLC34A1Q06495 639 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 CTTNQ14247 550 aaKnown RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 TRMT5Q32P41 509 aaKnown RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 NLRP9Q7RTR0 991 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 ARHGAP22Q7Z5H3 698 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 NT5DC3Q86UY8 548 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 PRPF31Q8WWY3 499 aaKnown RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 RGL1Q9NZL6 768 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 SUGT1Q9Y2Z0 365 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 CYP26A1O43174 497 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 SERPINB3P29508 390 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 YWHABP31946 246 aaKnown RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 RABGAP1LQ5R372 815 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 PPIL6Q8IXY8 311 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms